| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is arnT [H]
Identifier: 116328892
GI number: 116328892
Start: 2703449
End: 2705185
Strand: Reverse
Name: arnT [H]
Synonym: LBL_2283
Alternate gene names: 116328892
Gene position: 2705185-2703449 (Counterclockwise)
Preceding gene: 116328893
Following gene: 116328890
Centisome position: 74.84
GC content: 40.3
Gene sequence:
>1737_bases ATGAATCAAATTTTCGTAGATGATAAACAACCGATTTCCATACGAGTTCTTTTCGTCCTTCTAATCGTTTCCGTTCTTCC TTTGATCCTAACTCTTCCTTTGGACGTAATCGATATCGATTCTTCCCAGTACGCGGAAATTTCAAGAGAAATGGTGGAGG GAGGAAATCCTTTTTTTATCCGGGACAATGGAAGAAAGTATTTGGATAAACCGATTCTTACTTTTTGGAAAATTTCCCTT TCTTTTTTTGTGTTCGGTTATCAAAATTTCGCGTTTCGTCTTCCGGCTCTTTTGTTCACTTTTCTTTCTTTCTGGGGAAT GTTCAAACTCACAGAACTTTATTCGGGAAGTCGATTGAGGGCTTGGATCGCGGTGTTTTTGTACGCCCTTTCTCCGGGAC TTTATTCTATGGTAGTGGACCCTAAAATCGACGTTTATCTGACTCCCTATCTGATATTGGTTCATACCTTTTATTATTTG GGTTTTAAAAAAAATAAGAATTACTATTATGGAATGTATTTCGCGATGGGCCTCGGTTTTATTACGAAGGGACCGATTGC GATGGTGATTCCCGGAATTTCGATTGGAGGTGATATATTATTTCGAAGAGACTGGAAACGACTTTCGGAAATGAAACTCT TTCCTGGAGTGTTTCTTGCGCTTTTCCCGCCGCTTTTGTGGTCGATTCCCTTGTATCTTGAATTTCAAACTTACGGTCCG TATTTCTTCTTATGGATTCAATCCTTCGGCCGCTTTTACGTGAAGATGTACAATCAGAAATTCAATCCTTTGTTCTTTTA CTCTAATTTCTCCTGGGCGTTCGGTGCTTTTATTCTACCGTTTGCCGGATTCGTTTTCGAGCGGGTCCGATTTTTTCTTA AGGAAGGGCAAGTAAAAGGTGTATTCAAGAATATTCTAAAAAATGAATATAGAAATCGGGATTTTGTTCCCGGTTTTTGG TTGTTCTTATTCTTATTTTTGATCAGTTTTTCCAGATACCAGCTCCCTCAGTATATCTATTGGTGTCTTCCTGCTGCTGC GGTAATCGGTGCGGGGGTTTTGGAATCGATTCTTTTGTCTGCCAAAGATTCTAAAAAAGGCAGTTCTATTGATAAAATCC GTTTGAGCCTTCTTCTTTTTACCGCAGGAGCTTTTTTAGTTCCGACTTTTATTTTGCCTTCAATCAGTATTCAGGTTGGT TGGAGTTATCTGATTCTTCCTTTGATTTATCTCGGGTTTTTTCTTTGGGTGTATTTTCGGTCCGAAAAGGAAGGAAGGTT GCTCGCATATTGGATTTTTCCGGTTTCCCTCTTTTTCTCGATCGTGAGTTTATATCTCTATCCTATGCTCACATCGTATC AACCTTCTAAGGAGATCGGGACTCTCATCCGCGAGAACGAATCGGGTAAGGAAAAGTTATTTCTTTTCGGAGTCCCCGCT TCTAAAAGGTCCTATGCTTATTATTCCAGGAGAATCTCGAGGACACTTTTTGATCCCGCAATCTTGGTCGAGGCGATTCA AAAAGACGGACAACGTTATTTGATCGTTCAAGACAAATGGCTTCCGAAGATGGGCGAGTTCTTTGGCGACGATATCGAAT TTGAAACCGTCAAGGAATTTCCCTCCTACAAAGTTGCGACTCCGGAAGGAAAATTCTTTTTGAAAGCTTGGAGAGATCGG ATTGTGGGTAAGGTGGTTTTGATGAAAGCCACCTTAAAAAATTCTCGGAAAAGATGA
Upstream 100 bases:
>100_bases ACAAAGTTTCGTCCTTCCTTGTTTTGAATCCGAAACCACATGCAAAGGTTTTAATGCTTGCGTGATGGAATCCGGATTTA TGGATTAAAAAGGAGTTTTT
Downstream 100 bases:
>100_bases GGGGTTTCGAAAAAAAGATGAGGGGAATCTCGGCTTTCACCCGAAAAATGAATTAGGCTAAATTGTGAGCCTGGTTTGGT TTTGGTCCCTGGGTAAAGCC
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase [H]
Number of amino acids: Translated: 578; Mature: 578
Protein sequence:
>578_residues MNQIFVDDKQPISIRVLFVLLIVSVLPLILTLPLDVIDIDSSQYAEISREMVEGGNPFFIRDNGRKYLDKPILTFWKISL SFFVFGYQNFAFRLPALLFTFLSFWGMFKLTELYSGSRLRAWIAVFLYALSPGLYSMVVDPKIDVYLTPYLILVHTFYYL GFKKNKNYYYGMYFAMGLGFITKGPIAMVIPGISIGGDILFRRDWKRLSEMKLFPGVFLALFPPLLWSIPLYLEFQTYGP YFFLWIQSFGRFYVKMYNQKFNPLFFYSNFSWAFGAFILPFAGFVFERVRFFLKEGQVKGVFKNILKNEYRNRDFVPGFW LFLFLFLISFSRYQLPQYIYWCLPAAAVIGAGVLESILLSAKDSKKGSSIDKIRLSLLLFTAGAFLVPTFILPSISIQVG WSYLILPLIYLGFFLWVYFRSEKEGRLLAYWIFPVSLFFSIVSLYLYPMLTSYQPSKEIGTLIRENESGKEKLFLFGVPA SKRSYAYYSRRISRTLFDPAILVEAIQKDGQRYLIVQDKWLPKMGEFFGDDIEFETVKEFPSYKVATPEGKFFLKAWRDR IVGKVVLMKATLKNSRKR
Sequences:
>Translated_578_residues MNQIFVDDKQPISIRVLFVLLIVSVLPLILTLPLDVIDIDSSQYAEISREMVEGGNPFFIRDNGRKYLDKPILTFWKISL SFFVFGYQNFAFRLPALLFTFLSFWGMFKLTELYSGSRLRAWIAVFLYALSPGLYSMVVDPKIDVYLTPYLILVHTFYYL GFKKNKNYYYGMYFAMGLGFITKGPIAMVIPGISIGGDILFRRDWKRLSEMKLFPGVFLALFPPLLWSIPLYLEFQTYGP YFFLWIQSFGRFYVKMYNQKFNPLFFYSNFSWAFGAFILPFAGFVFERVRFFLKEGQVKGVFKNILKNEYRNRDFVPGFW LFLFLFLISFSRYQLPQYIYWCLPAAAVIGAGVLESILLSAKDSKKGSSIDKIRLSLLLFTAGAFLVPTFILPSISIQVG WSYLILPLIYLGFFLWVYFRSEKEGRLLAYWIFPVSLFFSIVSLYLYPMLTSYQPSKEIGTLIRENESGKEKLFLFGVPA SKRSYAYYSRRISRTLFDPAILVEAIQKDGQRYLIVQDKWLPKMGEFFGDDIEFETVKEFPSYKVATPEGKFFLKAWRDR IVGKVVLMKATLKNSRKR >Mature_578_residues MNQIFVDDKQPISIRVLFVLLIVSVLPLILTLPLDVIDIDSSQYAEISREMVEGGNPFFIRDNGRKYLDKPILTFWKISL SFFVFGYQNFAFRLPALLFTFLSFWGMFKLTELYSGSRLRAWIAVFLYALSPGLYSMVVDPKIDVYLTPYLILVHTFYYL GFKKNKNYYYGMYFAMGLGFITKGPIAMVIPGISIGGDILFRRDWKRLSEMKLFPGVFLALFPPLLWSIPLYLEFQTYGP YFFLWIQSFGRFYVKMYNQKFNPLFFYSNFSWAFGAFILPFAGFVFERVRFFLKEGQVKGVFKNILKNEYRNRDFVPGFW LFLFLFLISFSRYQLPQYIYWCLPAAAVIGAGVLESILLSAKDSKKGSSIDKIRLSLLLFTAGAFLVPTFILPSISIQVG WSYLILPLIYLGFFLWVYFRSEKEGRLLAYWIFPVSLFFSIVSLYLYPMLTSYQPSKEIGTLIRENESGKEKLFLFGVPA SKRSYAYYSRRISRTLFDPAILVEAIQKDGQRYLIVQDKWLPKMGEFFGDDIEFETVKEFPSYKVATPEGKFFLKAWRDR IVGKVVLMKATLKNSRKR
Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 83 family [H]
Homologues:
Organism=Escherichia coli, GI1788591, Length=341, Percent_Identity=24.0469208211144, Blast_Score=71, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022839 - InterPro: IPR003342 [H]
Pfam domain/function: PF02366 PMT [H]
EC number: =2.4.2.43 [H]
Molecular weight: Translated: 67527; Mature: 67527
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQIFVDDKQPISIRVLFVLLIVSVLPLILTLPLDVIDIDSSQYAEISREMVEGGNPFFI CCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCCEEEE RDNGRKYLDKPILTFWKISLSFFVFGYQNFAFRLPALLFTFLSFWGMFKLTELYSGSRLR ECCCCHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH AWIAVFLYALSPGLYSMVVDPKIDVYLTPYLILVHTFYYLGFKKNKNYYYGMYFAMGLGF HHHHHHHHHHCCCCEEEEECCCCCEEEHHHHHHHHHHHHHEEEECCCEEEEHHHHHHHHH ITKGPIAMVIPGISIGGDILFRRDWKRLSEMKLFPGVFLALFPPLLWSIPLYLEFQTYGP HCCCCEEEEECCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC YFFLWIQSFGRFYVKMYNQKFNPLFFYSNFSWAFGAFILPFAGFVFERVRFFLKEGQVKG CHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VFKNILKNEYRNRDFVPGFWLFLFLFLISFSRYQLPQYIYWCLPAAAVIGAGVLESILLS HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH AKDSKKGSSIDKIRLSLLLFTAGAFLVPTFILPSISIQVGWSYLILPLIYLGFFLWVYFR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHC SEKEGRLLAYWIFPVSLFFSIVSLYLYPMLTSYQPSKEIGTLIRENESGKEKLFLFGVPA CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEECCC SKRSYAYYSRRISRTLFDPAILVEAIQKDGQRYLIVQDKWLPKMGEFFGDDIEFETVKEF CCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHCCCCCCHHHHHHC PSYKVATPEGKFFLKAWRDRIVGKVVLMKATLKNSRKR CCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNQIFVDDKQPISIRVLFVLLIVSVLPLILTLPLDVIDIDSSQYAEISREMVEGGNPFFI CCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCCEEEE RDNGRKYLDKPILTFWKISLSFFVFGYQNFAFRLPALLFTFLSFWGMFKLTELYSGSRLR ECCCCHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH AWIAVFLYALSPGLYSMVVDPKIDVYLTPYLILVHTFYYLGFKKNKNYYYGMYFAMGLGF HHHHHHHHHHCCCCEEEEECCCCCEEEHHHHHHHHHHHHHEEEECCCEEEEHHHHHHHHH ITKGPIAMVIPGISIGGDILFRRDWKRLSEMKLFPGVFLALFPPLLWSIPLYLEFQTYGP HCCCCEEEEECCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC YFFLWIQSFGRFYVKMYNQKFNPLFFYSNFSWAFGAFILPFAGFVFERVRFFLKEGQVKG CHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VFKNILKNEYRNRDFVPGFWLFLFLFLISFSRYQLPQYIYWCLPAAAVIGAGVLESILLS HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH AKDSKKGSSIDKIRLSLLLFTAGAFLVPTFILPSISIQVGWSYLILPLIYLGFFLWVYFR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHC SEKEGRLLAYWIFPVSLFFSIVSLYLYPMLTSYQPSKEIGTLIRENESGKEKLFLFGVPA CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEECCC SKRSYAYYSRRISRTLFDPAILVEAIQKDGQRYLIVQDKWLPKMGEFFGDDIEFETVKEF CCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHCCCCCCHHHHHHC PSYKVATPEGKFFLKAWRDRIVGKVVLMKATLKNSRKR CCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA