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The map label for this gene is ybbC [H]

Identifier: 116328874

GI number: 116328874

Start: 2667701

End: 2668876

Strand: Reverse

Name: ybbC [H]

Synonym: LBL_2261

Alternate gene names: 116328874

Gene position: 2668876-2667701 (Counterclockwise)

Preceding gene: 116328876

Following gene: 116328871

Centisome position: 73.84

GC content: 41.16

Gene sequence:

>1176_bases
ATGCCTCTTAAAGACCATACCGGAAGAATGAATCAAATAGAAAAGTTACTTCGTGGTTCCAGAATCGGAATGATCACAAA
TCAGAGCGCTTTCGGGCCGGATGGAGAATATCACTTTCAAATCATCCACAGACGTTACGATCTGAAAAAAATATTCCTCC
CGGAACACGGGCTTTTTGCGGAACTTCAGGATCAGGTTTCCGGTTCAAGTTTGAGATACGATCTGGACGAAGTGGAGTTT
ATCAACCTTTACGGAGATCAAGAATCCAGCTTGGTGCCCGATTCGGTTTCTTTGGACGGCTTGGATGTAGTCATCATAGA
CATAAGAGATACGGGCGCGCGTTATTATACCTTTCTAACGACTGCGTATTATTTTTTGGAAGAGATCAATAAGTGGAATT
CTTCCGGAAAAACGGAAATTTCCGTAGTCGTTTTCGATTCGCCTAATCCGGCGGGAAAAAAAGTCGAAGGTTCTCCTTTG
CAAAAAGAATTCGAATCCTTTGTCGGGGTCAGAAGCGTTTTACACCGTCATGGCTTGACTCCGGGAGGACTGCTTTCTTA
TTATCAAAAAGAATTTTCCTTAAACCTAAAAATCCGGATCGTAAACAAGGGATGGTATGAAAAAAAAGATTCCGAATTTC
TTTGGATTCCACCTTCCCCCAATATTCCGTTTTTCTCCACTTGTTATGTTTATCCTGGGCAATGTCTTTTGGAAGGTACA
AATCTTTCCGAAGGGAGGGGAACTACGAGGCCTTTTGAAACGTTCGGAGCTCCTTACATCGACGAGCAGAAAGAACATAT
TCGAAAAGCGTTGGAAAAATCTCAAAGGGGGAGCGTGATTTTAAGGCCTTTGAAATTTATTCCTACTTTCCATAAACATA
AGGACGAAATCTGCGGCGGTTTTCAAATCTTGTTGAAAGAACCGGAGAAGTTTCACAGTCTATTTTTCACCTTAAAATTG
ATCCGAATGTTGAGGGAAGAATATCCGAACGACTTTGTTTATAGGTCGGGCGCATACGAATTTAGATCCGATCTTACCGC
GATTGAATTGCTTGTAGGGGATCGTTTCTTGCTCGATTATCTAGGCGGAAAATATTCCGATTCTTTTATATTTGAATATC
TGAATGAACAAGAGCTGCTATGGACGAAAAAATGTAAGGCGATGAAACTTATTTAA

Upstream 100 bases:

>100_bases
TTTCTTCTCCATAGAGAAAACAATTTTTTTGAGAATACGTTAAAAAACCGGATTTTACTTTTTTAGTTTTTAGCGTGATT
CTCGTTCAACTTGACTCCTT

Downstream 100 bases:

>100_bases
AATCGGAATTTATTTCAAAACTCGCTTATAAATCGTTTAAAAGCGGTTTCTAATATGATATGACGATCTTTCTATATGGC
CCAACGTTTTTAAGATAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MPLKDHTGRMNQIEKLLRGSRIGMITNQSAFGPDGEYHFQIIHRRYDLKKIFLPEHGLFAELQDQVSGSSLRYDLDEVEF
INLYGDQESSLVPDSVSLDGLDVVIIDIRDTGARYYTFLTTAYYFLEEINKWNSSGKTEISVVVFDSPNPAGKKVEGSPL
QKEFESFVGVRSVLHRHGLTPGGLLSYYQKEFSLNLKIRIVNKGWYEKKDSEFLWIPPSPNIPFFSTCYVYPGQCLLEGT
NLSEGRGTTRPFETFGAPYIDEQKEHIRKALEKSQRGSVILRPLKFIPTFHKHKDEICGGFQILLKEPEKFHSLFFTLKL
IRMLREEYPNDFVYRSGAYEFRSDLTAIELLVGDRFLLDYLGGKYSDSFIFEYLNEQELLWTKKCKAMKLI

Sequences:

>Translated_391_residues
MPLKDHTGRMNQIEKLLRGSRIGMITNQSAFGPDGEYHFQIIHRRYDLKKIFLPEHGLFAELQDQVSGSSLRYDLDEVEF
INLYGDQESSLVPDSVSLDGLDVVIIDIRDTGARYYTFLTTAYYFLEEINKWNSSGKTEISVVVFDSPNPAGKKVEGSPL
QKEFESFVGVRSVLHRHGLTPGGLLSYYQKEFSLNLKIRIVNKGWYEKKDSEFLWIPPSPNIPFFSTCYVYPGQCLLEGT
NLSEGRGTTRPFETFGAPYIDEQKEHIRKALEKSQRGSVILRPLKFIPTFHKHKDEICGGFQILLKEPEKFHSLFFTLKL
IRMLREEYPNDFVYRSGAYEFRSDLTAIELLVGDRFLLDYLGGKYSDSFIFEYLNEQELLWTKKCKAMKLI
>Mature_390_residues
PLKDHTGRMNQIEKLLRGSRIGMITNQSAFGPDGEYHFQIIHRRYDLKKIFLPEHGLFAELQDQVSGSSLRYDLDEVEFI
NLYGDQESSLVPDSVSLDGLDVVIIDIRDTGARYYTFLTTAYYFLEEINKWNSSGKTEISVVVFDSPNPAGKKVEGSPLQ
KEFESFVGVRSVLHRHGLTPGGLLSYYQKEFSLNLKIRIVNKGWYEKKDSEFLWIPPSPNIPFFSTCYVYPGQCLLEGTN
LSEGRGTTRPFETFGAPYIDEQKEHIRKALEKSQRGSVILRPLKFIPTFHKHKDEICGGFQILLKEPEKFHSLFFTLKLI
RMLREEYPNDFVYRSGAYEFRSDLTAIELLVGDRFLLDYLGGKYSDSFIFEYLNEQELLWTKKCKAMKLI

Specific function: Unknown

COG id: COG3876

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008302 [H]

Pfam domain/function: PF07075 DUF1343 [H]

EC number: NA

Molecular weight: Translated: 45223; Mature: 45092

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLKDHTGRMNQIEKLLRGSRIGMITNQSAFGPDGEYHFQIIHRRYDLKKIFLPEHGLFA
CCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEHHHCCEEEECCCCCCHH
ELQDQVSGSSLRYDLDEVEFINLYGDQESSLVPDSVSLDGLDVVIIDIRDTGARYYTFLT
HHHHHCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHH
TAYYFLEEINKWNSSGKTEISVVVFDSPNPAGKKVEGSPLQKEFESFVGVRSVLHRHGLT
HHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PGGLLSYYQKEFSLNLKIRIVNKGWYEKKDSEFLWIPPSPNIPFFSTCYVYPGQCLLEGT
CCHHHHHHHHHHEEEEEEEEEECCCCCCCCCCEEEECCCCCCCCEEEEEECCCEEEEECC
NLSEGRGTTRPFETFGAPYIDEQKEHIRKALEKSQRGSVILRPLKFIPTFHKHKDEICGG
CCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHCCCHHHHHHHHCCC
FQILLKEPEKFHSLFFTLKLIRMLREEYPNDFVYRSGAYEFRSDLTAIELLVGDRFLLDY
HHHECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHCHHHHHHHHCCHHHHHH
LGGKYSDSFIFEYLNEQELLWTKKCKAMKLI
HCCCCCCHHHHHHCCCCHHHHHHHCHHHCCC
>Mature Secondary Structure 
PLKDHTGRMNQIEKLLRGSRIGMITNQSAFGPDGEYHFQIIHRRYDLKKIFLPEHGLFA
CCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEHHHCCEEEECCCCCCHH
ELQDQVSGSSLRYDLDEVEFINLYGDQESSLVPDSVSLDGLDVVIIDIRDTGARYYTFLT
HHHHHCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHH
TAYYFLEEINKWNSSGKTEISVVVFDSPNPAGKKVEGSPLQKEFESFVGVRSVLHRHGLT
HHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PGGLLSYYQKEFSLNLKIRIVNKGWYEKKDSEFLWIPPSPNIPFFSTCYVYPGQCLLEGT
CCHHHHHHHHHHEEEEEEEEEECCCCCCCCCCEEEECCCCCCCCEEEEEECCCEEEEECC
NLSEGRGTTRPFETFGAPYIDEQKEHIRKALEKSQRGSVILRPLKFIPTFHKHKDEICGG
CCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHCCCHHHHHHHHCCC
FQILLKEPEKFHSLFFTLKLIRMLREEYPNDFVYRSGAYEFRSDLTAIELLVGDRFLLDY
HHHECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHCHHHHHHHHCCHHHHHH
LGGKYSDSFIFEYLNEQELLWTKKCKAMKLI
HCCCCCCHHHHHHCCCCHHHHHHHCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8011666; 9274029; 9384377 [H]