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The map label for this gene is 116328851

Identifier: 116328851

GI number: 116328851

Start: 2632017

End: 2632823

Strand: Reverse

Name: 116328851

Synonym: LBL_2235

Alternate gene names: NA

Gene position: 2632823-2632017 (Counterclockwise)

Preceding gene: 116328852

Following gene: 116328849

Centisome position: 72.84

GC content: 37.05

Gene sequence:

>807_bases
ATGGGAGAATTACTTTCAAGGTTCGGTTACTCTGGTTTTTTCGGAATTATTTGGGGAATTTTTTTGATTCGGTATTTGGT
TTTCTCGGGGATTGCGTTTTTGGTTGTTTGGGTTTTTTGTGGTAAAACACTTTCACACAAACTTATCCAAAGTAAAAAAC
CTGAGAAGGAAAAGATCTTTTATGAAATAAAATATTCTATGTTGACTTTCTTTATCTTCGGATTATCCGGAATATTCGTC
GTTTGGGCGAAGGTGAACGGATTCAATCGGATCTACGACAATGTCGGCGATTATGGAATTGTGTATCTTATCTTCAGTTT
GTTTGTGTTGGTTCTTTTGCATGATACTTATTTTTATTGGACACATCGAATGATGCACCATAAACTTTTCTTTAAATATT
TCCATCTCGTGCATCATAAGTCCATCAATCCTTCTCCTTGGGCGGCGTTTTCATTTCATCCTTTGGAAGCGATCGTAGAA
TCCGGAATCGTCCCCCTTGTGTCGTTTGTACTTCCTTTACATCCAGGGGCGATGATCGTATTTTTCGTTTATATGACTTC
GTTGAACGTGTTGGGTCATCTTTCTTATGAATTTTTTCCTTCCTGGTTTTTAAAAAGTAAGTTCACGAGCTGGCATAACA
CGACTACACACCACAACATGCATCATAAATACTTCAACTGTAACTATTCCCTCTATTTTAACTTTTGGGATAGAATCATG
GGTACCAATCATGAAAAATACAAGGAGAAGTTCGAGGAAGTCGCATCCAGAGTTCCTGAAAAGGCAAAAGTAATATTAGG
AAAATAA

Upstream 100 bases:

>100_bases
TCGAAAAGAAATCCTAAACGATTTTAAAAAGAGCAAGCTGAAATGAGAATTTAAGTCCATAATTAAATCGAATCTGTGAT
TTATGATACGGAGAATGAAT

Downstream 100 bases:

>100_bases
AATATTTTAATCCCTGTCGCCGCATAAATAGGAAGTCGGTTTTGCGTATTTACTGATCCAACGATCGTAGATTTCTTGAA
TAGGTACATTGTCCAAATAA

Product: sterol desaturase

Products: NA

Alternate protein names: Fatty Acid Hydroxylase; Desaturase; Sterol Desaturase; C-5 Sterol Desaturase; Sterol Desaturase Superfamily; Fatty Acid Hydroxylase Superfamily

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MGELLSRFGYSGFFGIIWGIFLIRYLVFSGIAFLVVWVFCGKTLSHKLIQSKKPEKEKIFYEIKYSMLTFFIFGLSGIFV
VWAKVNGFNRIYDNVGDYGIVYLIFSLFVLVLLHDTYFYWTHRMMHHKLFFKYFHLVHHKSINPSPWAAFSFHPLEAIVE
SGIVPLVSFVLPLHPGAMIVFFVYMTSLNVLGHLSYEFFPSWFLKSKFTSWHNTTTHHNMHHKYFNCNYSLYFNFWDRIM
GTNHEKYKEKFEEVASRVPEKAKVILGK

Sequences:

>Translated_268_residues
MGELLSRFGYSGFFGIIWGIFLIRYLVFSGIAFLVVWVFCGKTLSHKLIQSKKPEKEKIFYEIKYSMLTFFIFGLSGIFV
VWAKVNGFNRIYDNVGDYGIVYLIFSLFVLVLLHDTYFYWTHRMMHHKLFFKYFHLVHHKSINPSPWAAFSFHPLEAIVE
SGIVPLVSFVLPLHPGAMIVFFVYMTSLNVLGHLSYEFFPSWFLKSKFTSWHNTTTHHNMHHKYFNCNYSLYFNFWDRIM
GTNHEKYKEKFEEVASRVPEKAKVILGK
>Mature_267_residues
GELLSRFGYSGFFGIIWGIFLIRYLVFSGIAFLVVWVFCGKTLSHKLIQSKKPEKEKIFYEIKYSMLTFFIFGLSGIFVV
WAKVNGFNRIYDNVGDYGIVYLIFSLFVLVLLHDTYFYWTHRMMHHKLFFKYFHLVHHKSINPSPWAAFSFHPLEAIVES
GIVPLVSFVLPLHPGAMIVFFVYMTSLNVLGHLSYEFFPSWFLKSKFTSWHNTTTHHNMHHKYFNCNYSLYFNFWDRIMG
TNHEKYKEKFEEVASRVPEKAKVILGK

Specific function: Unknown

COG id: COG3000

COG function: function code I; Sterol desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI68160945, Length=227, Percent_Identity=24.6696035242291, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI68160941, Length=227, Percent_Identity=24.6696035242291, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI5803157, Length=261, Percent_Identity=27.2030651340996, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI62865628, Length=164, Percent_Identity=29.2682926829268, Blast_Score=65, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6323085, Length=191, Percent_Identity=27.7486910994764, Blast_Score=75, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6321497, Length=224, Percent_Identity=26.3392857142857, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31748; Mature: 31616

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCHHHHHHHHHHHHHHCCHHHHHCCCC
>Mature Secondary Structure 
GELLSRFGYSGFFGIIWGIFLIRYLVFSGIAFLVVWVFCGKTLSHKLIQSKKPEKEKIF
CHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHH
YEIKYSMLTFFIFGLSGIFVVWAKVNGFNRIYDNVGDYGIVYLIFSLFVLVLLHDTYFYW
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
THRMMHHKLFFKYFHLVHHKSINPSPWAAFSFHPLEAIVESGIVPLVSFVLPLHPGAMIV
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHCCHHHHHHHHHCCCCHHHHH
FFVYMTSLNVLGHLSYEFFPSWFLKSKFTSWHNTTTHHNMHHKYFNCNYSLYFNFWDRIM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCEEEEHHHHHHHH
GTNHEKYKEKFEEVASRVPEKAKVILGK
CCCHHHHHHHHHHHHHHCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA