| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116328814
Identifier: 116328814
GI number: 116328814
Start: 2580056
End: 2581420
Strand: Reverse
Name: 116328814
Synonym: LBL_2190
Alternate gene names: NA
Gene position: 2581420-2580056 (Counterclockwise)
Preceding gene: 116328815
Following gene: 116328813
Centisome position: 71.42
GC content: 30.04
Gene sequence:
>1365_bases ATGGCAAAATGGAAATTAACCTATGAAGCGTTAGAATTTATAGGTAGGGACGGGGCCGGATGGCCCATTATTAATCTAAT ATCTGATTCTTATAATGTTGAAGATAACTCTATAGTCCGTGTCTCTGTAAAAGCAAAGAATATGGTTTTGAAGACCTTAC CAGAGAACATTGTTGGAGTTCGAGTTTTGGATATTGAAAGAATTGATAAAATGACGGGCAAAAACTACTTTGAAAGCTAT CAAATTGAAGATCTTAATTTTGAATTAGAAGAAAGTGATGTTAAGAAGTTACGAAAAATACAATTTGATCTATTATCCAT TGACGGCGGTTCATTAGATTTCGATTATCTAAGACTTTTTAATCCAGATTTGTTTGTTATGAATTTAATGAATGTGAAAG CATTCTTTGTTGATGGTTATGGGGTACTAAGTCATGAAGAAGGAGTTTTAGTATTAGAAAATTTAAATAACTTTTATAAT TCATTTACTTCTGATCAAATCAACGTTTTAAGAATTAATCCCAAAAGTGTCTCTTATGATGAAAACGAATTAATTCGTAA ATTTCTCGAACAAGATCGACAAGTCGTAGATTCATCTAGTAAACAAAATTACGTTAAAAATGGAAGTAAAGTTAATCTAA AATTTCTAGAAGAAAAAATTAAAGATTCGGAAATAATTTCTGATATAATTGATTGGATAGTTGAAAACGAGGAAAATCCT GAATTATTAAAAAACTTCAGCAAACTTACTCCGGAAAATTTAAGCAAACTAAATACATTATCCGGTATTGTAACTTTAAA GAATTGTTTACTACGATGGGAGGAAAATCTACTCCATTCTTCCGAAGACTTTTGGCAAAAAGAGTTTGAAGATAACTCAT ACGTAATTTCTCAACTTTTTACATCTCCAGTTACAATTATGAAATCTAAAGCTTACTTAGGTGGCAAGAGTATTCATAAT ACTGGAGGATCGTTAGTGGATTATCTTTTCGTTAATAAATTAACAAAGAACACAAGTATAATTGAATTAAAAACCCCGGC CACAAGATTATTAGGCTCGAATTATCGTAATACCATTTATAATATTTCTGCTGAATTATCTGGAGCGATTGTACAGCTTT CTAATTATAAAGACGAACTTTTAAAAAACTATTACCCGCTGACAAATTTAAATAAAAGAATATTTCATGCATATGATCCT TCTTGCATACTCATAGTGGGAAATTTCGCGACGGAATTAGATTCCGAAGAAAAAGTAAAATCTTTCGAGTTATTTCGACA ACAACTACAGAATATTCAAATAATTACTTTCGATGAACTTTTTGAAAAAATGCGACTATTAATACATTTATTAGAAGGTA GTTAG
Upstream 100 bases:
>100_bases TGTACTAGAATAAATTTAAGTGAAAAAATCGTTCACGGCTTTTAGGGCCGCTTCCCGATCCATGACATCGGGAAAATTAG GTTATGGTTAAGAAAAAATT
Downstream 100 bases:
>100_bases TCTTCCCAGAAAAAGAGTTACAATAGCGAATAACGCAAATAGAATGCTATCCAAGTAGAAAAACTTAGAAACAAAATCCC CATAAAACATCCAGAAACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MAKWKLTYEALEFIGRDGAGWPIINLISDSYNVEDNSIVRVSVKAKNMVLKTLPENIVGVRVLDIERIDKMTGKNYFESY QIEDLNFELEESDVKKLRKIQFDLLSIDGGSLDFDYLRLFNPDLFVMNLMNVKAFFVDGYGVLSHEEGVLVLENLNNFYN SFTSDQINVLRINPKSVSYDENELIRKFLEQDRQVVDSSSKQNYVKNGSKVNLKFLEEKIKDSEIISDIIDWIVENEENP ELLKNFSKLTPENLSKLNTLSGIVTLKNCLLRWEENLLHSSEDFWQKEFEDNSYVISQLFTSPVTIMKSKAYLGGKSIHN TGGSLVDYLFVNKLTKNTSIIELKTPATRLLGSNYRNTIYNISAELSGAIVQLSNYKDELLKNYYPLTNLNKRIFHAYDP SCILIVGNFATELDSEEKVKSFELFRQQLQNIQIITFDELFEKMRLLIHLLEGS
Sequences:
>Translated_454_residues MAKWKLTYEALEFIGRDGAGWPIINLISDSYNVEDNSIVRVSVKAKNMVLKTLPENIVGVRVLDIERIDKMTGKNYFESY QIEDLNFELEESDVKKLRKIQFDLLSIDGGSLDFDYLRLFNPDLFVMNLMNVKAFFVDGYGVLSHEEGVLVLENLNNFYN SFTSDQINVLRINPKSVSYDENELIRKFLEQDRQVVDSSSKQNYVKNGSKVNLKFLEEKIKDSEIISDIIDWIVENEENP ELLKNFSKLTPENLSKLNTLSGIVTLKNCLLRWEENLLHSSEDFWQKEFEDNSYVISQLFTSPVTIMKSKAYLGGKSIHN TGGSLVDYLFVNKLTKNTSIIELKTPATRLLGSNYRNTIYNISAELSGAIVQLSNYKDELLKNYYPLTNLNKRIFHAYDP SCILIVGNFATELDSEEKVKSFELFRQQLQNIQIITFDELFEKMRLLIHLLEGS >Mature_453_residues AKWKLTYEALEFIGRDGAGWPIINLISDSYNVEDNSIVRVSVKAKNMVLKTLPENIVGVRVLDIERIDKMTGKNYFESYQ IEDLNFELEESDVKKLRKIQFDLLSIDGGSLDFDYLRLFNPDLFVMNLMNVKAFFVDGYGVLSHEEGVLVLENLNNFYNS FTSDQINVLRINPKSVSYDENELIRKFLEQDRQVVDSSSKQNYVKNGSKVNLKFLEEKIKDSEIISDIIDWIVENEENPE LLKNFSKLTPENLSKLNTLSGIVTLKNCLLRWEENLLHSSEDFWQKEFEDNSYVISQLFTSPVTIMKSKAYLGGKSIHNT GGSLVDYLFVNKLTKNTSIIELKTPATRLLGSNYRNTIYNISAELSGAIVQLSNYKDELLKNYYPLTNLNKRIFHAYDPS CILIVGNFATELDSEEKVKSFELFRQQLQNIQIITFDELFEKMRLLIHLLEGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52393; Mature: 52262
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKWKLTYEALEFIGRDGAGWPIINLISDSYNVEDNSIVRVSVKAKNMVLKTLPENIVGV CCCEEHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCEEEEEEECHHHHHHHCCCCHHEE RVLDIERIDKMTGKNYFESYQIEDLNFELEESDVKKLRKIQFDLLSIDGGSLDFDYLRLF EEEEHHHHHHHCCCCHHHCEEEECCCEEECHHHHHHHHHHHHEEEEECCCCCCHHHHHHC NPDLFVMNLMNVKAFFVDGYGVLSHEEGVLVLENLNNFYNSFTSDQINVLRINPKSVSYD CCCEEEHHHHCEEEEEEECCEEEECCCCEEEEHHHHHHHHCCCCCCEEEEEECCCCCCCC ENELIRKFLEQDRQVVDSSSKQNYVKNGSKVNLKFLEEKIKDSEIISDIIDWIVENEENP HHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCH ELLKNFSKLTPENLSKLNTLSGIVTLKNCLLRWEENLLHSSEDFWQKEFEDNSYVISQLF HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHH TSPVTIMKSKAYLGGKSIHNTGGSLVDYLFVNKLTKNTSIIELKTPATRLLGSNYRNTIY CCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCCCEE NISAELSGAIVQLSNYKDELLKNYYPLTNLNKRIFHAYDPSCILIVGNFATELDSEEKVK EEEHHHCCEEEEECCHHHHHHHHCCCCCCCCCCEEEEECCEEEEEEECHHHHCCCHHHHH SFELFRQQLQNIQIITFDELFEKMRLLIHLLEGS HHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AKWKLTYEALEFIGRDGAGWPIINLISDSYNVEDNSIVRVSVKAKNMVLKTLPENIVGV CCEEHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCEEEEEEECHHHHHHHCCCCHHEE RVLDIERIDKMTGKNYFESYQIEDLNFELEESDVKKLRKIQFDLLSIDGGSLDFDYLRLF EEEEHHHHHHHCCCCHHHCEEEECCCEEECHHHHHHHHHHHHEEEEECCCCCCHHHHHHC NPDLFVMNLMNVKAFFVDGYGVLSHEEGVLVLENLNNFYNSFTSDQINVLRINPKSVSYD CCCEEEHHHHCEEEEEEECCEEEECCCCEEEEHHHHHHHHCCCCCCEEEEEECCCCCCCC ENELIRKFLEQDRQVVDSSSKQNYVKNGSKVNLKFLEEKIKDSEIISDIIDWIVENEENP HHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCH ELLKNFSKLTPENLSKLNTLSGIVTLKNCLLRWEENLLHSSEDFWQKEFEDNSYVISQLF HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHH TSPVTIMKSKAYLGGKSIHNTGGSLVDYLFVNKLTKNTSIIELKTPATRLLGSNYRNTIY CCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCCCEE NISAELSGAIVQLSNYKDELLKNYYPLTNLNKRIFHAYDPSCILIVGNFATELDSEEKVK EEEHHHCCEEEEECCHHHHHHHHCCCCCCCCCCEEEEECCEEEEEEECHHHHCCCHHHHH SFELFRQQLQNIQIITFDELFEKMRLLIHLLEGS HHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA