| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
Click here to switch to the map view.
The map label for this gene is 116328758
Identifier: 116328758
GI number: 116328758
Start: 2496560
End: 2497621
Strand: Reverse
Name: 116328758
Synonym: LBL_2132
Alternate gene names: NA
Gene position: 2497621-2496560 (Counterclockwise)
Preceding gene: 116328759
Following gene: 116328757
Centisome position: 69.1
GC content: 43.41
Gene sequence:
>1062_bases ATGGCGGCTAAGAGAAAGAACTGGCTTCTATATGGAGCAAACGGTTACAGCGGGGAATTGATCGCAAGAAAGGCTGTTGA AAGGGGACAAAAACCTATCCTTGCAGGAAGAGCCGAATCGAAGATTCAGCCTCTTGCAGAAGAACTTGGTCTCCCATTCA GGATTTTTTCTTTGGAGAATTCGAAGGAAGTTCAGGCCCAAATCTTGGATTGTTTTTTGGTTTTGAATTGTGCCGGACCT TTTACGGAAACCGCACTTCCAATGGCGGAAACTTGTATCGAATCCGGGGTTCATTATCTGGATATCACGGGAGAAATTTC CGTATATGAAACGCTTTATTCTCTATCTTCCAAAGCGCTTGCAAAAAAAGTAATGCTTCTTCCGGGAGTAGGCTTCGATG TCGTGCCTACGGATTGTCTTGCCGTGATGCTCAAGGAAAAACTTCCCAAGGCACATTCTTTGGAACTCGGCTTTTCGGGT TTTACGGATATTTCCGGAGGAACCTTAAAAAGTATGCTCGCTCAACTTCCTCATGGAAGTAGGGTGAGAAGAAACGGAAA GATCGAAACGATTCCCCAATTGAGTTTGAAAAAGGTCGTGGAGATCAGTGGAAAATATGCGGAGTTTTTTGCGATTCCTT GGGGGGACGTTTTTACTTCTTTTATCTCCACCGGAATTTCGAATATCACGGTATATTCTTCTTTGCCTGAATTTCAAACT AAGATTTTGAAACTGTTACAGCCTACGGCTTTATTTTTAAAAAACTCTCTGATTCTCAAAGGAATGCAGAAACTCGTAGA ACTGACCGTCCGAGGTCCCGATGAAGAAAAAAGAAAAAAGGGGACGGTTCTTCTTTGGGGTGAGGCATGGACCGAAGCGA ATTCGAAAAAAGTTTCGATTCGAATGCGTTGTGCGGAAGCCTACGAGTTTACGGTCGAATCCGCATTAGCTGCCGTTGCC AAAGTGGGGAAAGGAAAATTCCAAGCGGGTTTTACGACTCCCGGTAAAGTGTTCGGTTCTAAATTCGTATTAGAAATTCC TGGTACTAAAATTTTACCTTAA
Upstream 100 bases:
>100_bases GCTTCGAAGTCGGTTCTCGGAATCGATTCTTGGATCGTATCTTGTGAAAATTTCCGTCAAAACTTGACGAATTCTTCCGA TTGAGAAAAATCTGGCCTTT
Downstream 100 bases:
>100_bases AATTCCGTGGAATGTCGTCGTATATAAGTTTATCGTAAAACCGATTTTTGTTTTGGAACGGACTCTAAACTTCGAAAATG TGTTCTATCCGAAAGAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein; Saccharopine Dehydrogenase Family Protein; UbiD Family Decarboxylase
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MAAKRKNWLLYGANGYSGELIARKAVERGQKPILAGRAESKIQPLAEELGLPFRIFSLENSKEVQAQILDCFLVLNCAGP FTETALPMAETCIESGVHYLDITGEISVYETLYSLSSKALAKKVMLLPGVGFDVVPTDCLAVMLKEKLPKAHSLELGFSG FTDISGGTLKSMLAQLPHGSRVRRNGKIETIPQLSLKKVVEISGKYAEFFAIPWGDVFTSFISTGISNITVYSSLPEFQT KILKLLQPTALFLKNSLILKGMQKLVELTVRGPDEEKRKKGTVLLWGEAWTEANSKKVSIRMRCAEAYEFTVESALAAVA KVGKGKFQAGFTTPGKVFGSKFVLEIPGTKILP
Sequences:
>Translated_353_residues MAAKRKNWLLYGANGYSGELIARKAVERGQKPILAGRAESKIQPLAEELGLPFRIFSLENSKEVQAQILDCFLVLNCAGP FTETALPMAETCIESGVHYLDITGEISVYETLYSLSSKALAKKVMLLPGVGFDVVPTDCLAVMLKEKLPKAHSLELGFSG FTDISGGTLKSMLAQLPHGSRVRRNGKIETIPQLSLKKVVEISGKYAEFFAIPWGDVFTSFISTGISNITVYSSLPEFQT KILKLLQPTALFLKNSLILKGMQKLVELTVRGPDEEKRKKGTVLLWGEAWTEANSKKVSIRMRCAEAYEFTVESALAAVA KVGKGKFQAGFTTPGKVFGSKFVLEIPGTKILP >Mature_352_residues AAKRKNWLLYGANGYSGELIARKAVERGQKPILAGRAESKIQPLAEELGLPFRIFSLENSKEVQAQILDCFLVLNCAGPF TETALPMAETCIESGVHYLDITGEISVYETLYSLSSKALAKKVMLLPGVGFDVVPTDCLAVMLKEKLPKAHSLELGFSGF TDISGGTLKSMLAQLPHGSRVRRNGKIETIPQLSLKKVVEISGKYAEFFAIPWGDVFTSFISTGISNITVYSSLPEFQTK ILKLLQPTALFLKNSLILKGMQKLVELTVRGPDEEKRKKGTVLLWGEAWTEANSKKVSIRMRCAEAYEFTVESALAAVAK VGKGKFQAGFTTPGKVFGSKFVLEIPGTKILP
Specific function: Unknown
COG id: COG3268
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI24646278, Length=160, Percent_Identity=30.625, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI24644140, Length=160, Percent_Identity=29.375, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI24644142, Length=160, Percent_Identity=29.375, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI21356081, Length=160, Percent_Identity=29.375, Blast_Score=75, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38586; Mature: 38454
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAKRKNWLLYGANGYSGELIARKAVERGQKPILAGRAESKIQPLAEELGLPFRIFSLEN CCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCCEEEEECCC SKEVQAQILDCFLVLNCAGPFTETALPMAETCIESGVHYLDITGEISVYETLYSLSSKAL CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHH AKKVMLLPGVGFDVVPTDCLAVMLKEKLPKAHSLELGFSGFTDISGGTLKSMLAQLPHGS HHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCC RVRRNGKIETIPQLSLKKVVEISGKYAEFFAIPWGDVFTSFISTGISNITVYSSLPEFQT CCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCEEEECCCHHHHH KILKLLQPTALFLKNSLILKGMQKLVELTVRGPDEEKRKKGTVLLWGEAWTEANSKKVSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEECHHCCCCCCEEEE RMRCAEAYEFTVESALAAVAKVGKGKFQAGFTTPGKVFGSKFVLEIPGTKILP EEEEHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHCCEEEEECCCCCCCC >Mature Secondary Structure AAKRKNWLLYGANGYSGELIARKAVERGQKPILAGRAESKIQPLAEELGLPFRIFSLEN CCCCCCEEEECCCCCCCHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCCEEEEECCC SKEVQAQILDCFLVLNCAGPFTETALPMAETCIESGVHYLDITGEISVYETLYSLSSKAL CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHH AKKVMLLPGVGFDVVPTDCLAVMLKEKLPKAHSLELGFSGFTDISGGTLKSMLAQLPHGS HHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCC RVRRNGKIETIPQLSLKKVVEISGKYAEFFAIPWGDVFTSFISTGISNITVYSSLPEFQT CCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCEEEECCCHHHHH KILKLLQPTALFLKNSLILKGMQKLVELTVRGPDEEKRKKGTVLLWGEAWTEANSKKVSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEECHHCCCCCCEEEE RMRCAEAYEFTVESALAAVAKVGKGKFQAGFTTPGKVFGSKFVLEIPGTKILP EEEEHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA