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The map label for this gene is 116328756

Identifier: 116328756

GI number: 116328756

Start: 2494192

End: 2495787

Strand: Reverse

Name: 116328756

Synonym: LBL_2130

Alternate gene names: NA

Gene position: 2495787-2494192 (Counterclockwise)

Preceding gene: 116328757

Following gene: 116328755

Centisome position: 69.05

GC content: 42.54

Gene sequence:

>1596_bases
ATGGTATCTTCACAGAATGTTTTAAGAACTCCGAGAGGAGAACCGTTTTTTAAAAACGAACCTTTCCGGAAGGTAAGGAA
TTTTGCGAAACAGTATTGGGATCAAGTTGGGATTTTGGGTCGTTTTCAGTTTCTGATTTTCGGGAAAACGGAAAGCCCAA
GACGCGGGTTCAAACTTGGAAAGTTCGTAAATACAATTTTTGTTTTCGGTTTTCTCGGATTCGTTTTCCCATTCTCTTGG
ATTTACCCGGAAGTAATTCCTTTCGAATCTGATTCCGTAACGGAAAAGAAAAAGTTTGACGAAAAAAAATCTCAAATTTT
TCAAGAAGGACAAACGCAAGCGGAAGTCGAGACGAATCCGATTCCGTCTTTTTCCGGAAAGGTCATAAACTGGGATGTGG
AAAAATTGACGGAGTATGCGGTTGCAAATAATCCCCTTTACCTCGCGGAAAAACAAAATATGAGAATCGAAAGGGGGAAG
GTGATCACAGCTTCTCTCTATAGAAATCCGGTCATACAACTCCAACAGCAGTTCATCGGAGTCCCCGGAGGAAGCGGATC
ATCCGGTCCACAAGTTCTCGGAGCCAACGGCTCTCAAGGAGGACATATGGAAGTGGCGCCTGCGCTTTATCAGGATCTGG
ATGTTTATGGAGTGGTTTCGCTTCGTTCCAAGGTGGCAAAAAAATCTTTTGAAGCGGTTTTGGGGGAATTCGACAACTTT
GATAGGCTTTTTCGGCTCAGACTCAGGCAGAACTATTGGGCTTATATCTTTCTTACAAATTTAGTAGATTATAATAAAGA
ATTTTATGAAAATTATAGTGATCTTCTGGAACTTACAAAATTTCGAGTTGAAAAGGGGGATATCTCTCCTCTCGAATACG
AAAGACTCGAGTTGGAAAGGATTCAGGTTGAAAAATTCTACCGCGATGCGCTTGTTCGTAGACAGCTCGTGGAAAAAGAA
CTTCGAATCCTTTCCGGAATTCGGGAAGCGGAAGGAATCTTTGCGTTTAAGACGGAAATGAGATTTAAATCCTTGGAAGA
CTTGGGACTTAGACTCAGGGAGATTACCACGGTCAATCGTCCCGATATCGCCGCACTTGAAGAAAGAGTCAAAGAGAAAA
AACTGAACATCGATCTCCAGAGAAGGGAAGCCCTCGGTTATGTACAAGTCGGGGGAGAATGGAGAATCAAAGGCAATGAA
CACTATGCGGGTGTTTTTGCGACTCTTCCCCTTCCTTTAAACGACAGGGGTCAGGGTAAGGTTCTTTCCGCAAAAGAAGA
ACACAAGAAGTTCGAACTTGCACTCGAGGCAAAAAAAAGAGAAGTCGACGAAGAGATCGAGGCTTCCAAGAAGGAACTTC
TTGCGAGAGAGGATCTTCTTGCAAAGTACGAAAGAATTAATCTATTACAAAAAAACAAACAATTGGAACAAAAATCCAGG
ATAGCATATGTCCGCGGCGCGTCCGATCAAGTAACCTTTCTCCAAGCCGAGAAAAATTATCTTACGGTTCTCAGGGATTA
TTACGAAGTGTTGTATCTCTATTACAACGCGGTTGAAATATATAAGGCGGCGGTAGGAAAAAAAACGGAGAGGTAA

Upstream 100 bases:

>100_bases
ATGAAAGTATGACGGAATGCGAATTGAAACTTAAATTCAAAGATAATATACGGCTGGAGAAGGAACTCATCAATCCATAC
TTTAAGAAAGTGCAGGGGAA

Downstream 100 bases:

>100_bases
TAAATCCTATCTCGGAGATTCGTATGTTCATAAGACGATACAAGATTATTCTCGTTCTTCTCGCGGCTTTAAGCGCCGGA
TATTTCGGATACAAAAAATT

Product: TolC related protein

Products: NA

Alternate protein names: LC Superfamily Outer Membrane Protein; LC Related Protein; Cation Efflux System Protein CzcC

Number of amino acids: Translated: 531; Mature: 531

Protein sequence:

>531_residues
MVSSQNVLRTPRGEPFFKNEPFRKVRNFAKQYWDQVGILGRFQFLIFGKTESPRRGFKLGKFVNTIFVFGFLGFVFPFSW
IYPEVIPFESDSVTEKKKFDEKKSQIFQEGQTQAEVETNPIPSFSGKVINWDVEKLTEYAVANNPLYLAEKQNMRIERGK
VITASLYRNPVIQLQQQFIGVPGGSGSSGPQVLGANGSQGGHMEVAPALYQDLDVYGVVSLRSKVAKKSFEAVLGEFDNF
DRLFRLRLRQNYWAYIFLTNLVDYNKEFYENYSDLLELTKFRVEKGDISPLEYERLELERIQVEKFYRDALVRRQLVEKE
LRILSGIREAEGIFAFKTEMRFKSLEDLGLRLREITTVNRPDIAALEERVKEKKLNIDLQRREALGYVQVGGEWRIKGNE
HYAGVFATLPLPLNDRGQGKVLSAKEEHKKFELALEAKKREVDEEIEASKKELLAREDLLAKYERINLLQKNKQLEQKSR
IAYVRGASDQVTFLQAEKNYLTVLRDYYEVLYLYYNAVEIYKAAVGKKTER

Sequences:

>Translated_531_residues
MVSSQNVLRTPRGEPFFKNEPFRKVRNFAKQYWDQVGILGRFQFLIFGKTESPRRGFKLGKFVNTIFVFGFLGFVFPFSW
IYPEVIPFESDSVTEKKKFDEKKSQIFQEGQTQAEVETNPIPSFSGKVINWDVEKLTEYAVANNPLYLAEKQNMRIERGK
VITASLYRNPVIQLQQQFIGVPGGSGSSGPQVLGANGSQGGHMEVAPALYQDLDVYGVVSLRSKVAKKSFEAVLGEFDNF
DRLFRLRLRQNYWAYIFLTNLVDYNKEFYENYSDLLELTKFRVEKGDISPLEYERLELERIQVEKFYRDALVRRQLVEKE
LRILSGIREAEGIFAFKTEMRFKSLEDLGLRLREITTVNRPDIAALEERVKEKKLNIDLQRREALGYVQVGGEWRIKGNE
HYAGVFATLPLPLNDRGQGKVLSAKEEHKKFELALEAKKREVDEEIEASKKELLAREDLLAKYERINLLQKNKQLEQKSR
IAYVRGASDQVTFLQAEKNYLTVLRDYYEVLYLYYNAVEIYKAAVGKKTER
>Mature_531_residues
MVSSQNVLRTPRGEPFFKNEPFRKVRNFAKQYWDQVGILGRFQFLIFGKTESPRRGFKLGKFVNTIFVFGFLGFVFPFSW
IYPEVIPFESDSVTEKKKFDEKKSQIFQEGQTQAEVETNPIPSFSGKVINWDVEKLTEYAVANNPLYLAEKQNMRIERGK
VITASLYRNPVIQLQQQFIGVPGGSGSSGPQVLGANGSQGGHMEVAPALYQDLDVYGVVSLRSKVAKKSFEAVLGEFDNF
DRLFRLRLRQNYWAYIFLTNLVDYNKEFYENYSDLLELTKFRVEKGDISPLEYERLELERIQVEKFYRDALVRRQLVEKE
LRILSGIREAEGIFAFKTEMRFKSLEDLGLRLREITTVNRPDIAALEERVKEKKLNIDLQRREALGYVQVGGEWRIKGNE
HYAGVFATLPLPLNDRGQGKVLSAKEEHKKFELALEAKKREVDEEIEASKKELLAREDLLAKYERINLLQKNKQLEQKSR
IAYVRGASDQVTFLQAEKNYLTVLRDYYEVLYLYYNAVEIYKAAVGKKTER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61688; Mature: 61688

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSSQNVLRTPRGEPFFKNEPFRKVRNFAKQYWDQVGILGRFQFLIFGKTESPRRGFKLG
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHEEEEEEEEECCCCCCCCHHHH
KFVNTIFVFGFLGFVFPFSWIYPEVIPFESDSVTEKKKFDEKKSQIFQEGQTQAEVETNP
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCC
IPSFSGKVINWDVEKLTEYAVANNPLYLAEKQNMRIERGKVITASLYRNPVIQLQQQFIG
CCCCCCCEEEECHHHHHHHHHCCCCEEEEECCCCEEECCCEEEHHHHHCHHHHHHHHHHC
VPGGSGSSGPQVLGANGSQGGHMEVAPALYQDLDVYGVVSLRSKVAKKSFEAVLGEFDNF
CCCCCCCCCCEEEECCCCCCCCEEECHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCH
DRLFRLRLRQNYWAYIFLTNLVDYNKEFYENYSDLLELTKFRVEKGDISPLEYERLELER
HHHHHHHHHCCCEEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
IQVEKFYRDALVRRQLVEKELRILSGIREAEGIFAFKTEMRFKSLEDLGLRLREITTVNR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHCCCC
PDIAALEERVKEKKLNIDLQRREALGYVQVGGEWRIKGNEHYAGVFATLPLPLNDRGQGK
CCHHHHHHHHHHHHCCCCEEHHHCCCEEEECCEEEECCCCEEEEEEEEECCCCCCCCCCC
VLSAKEEHKKFELALEAKKREVDEEIEASKKELLAREDLLAKYERINLLQKNKQLEQKSR
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
IAYVRGASDQVTFLQAEKNYLTVLRDYYEVLYLYYNAVEIYKAAVGKKTER
EEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVSSQNVLRTPRGEPFFKNEPFRKVRNFAKQYWDQVGILGRFQFLIFGKTESPRRGFKLG
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHEEEEEEEEECCCCCCCCHHHH
KFVNTIFVFGFLGFVFPFSWIYPEVIPFESDSVTEKKKFDEKKSQIFQEGQTQAEVETNP
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCC
IPSFSGKVINWDVEKLTEYAVANNPLYLAEKQNMRIERGKVITASLYRNPVIQLQQQFIG
CCCCCCCEEEECHHHHHHHHHCCCCEEEEECCCCEEECCCEEEHHHHHCHHHHHHHHHHC
VPGGSGSSGPQVLGANGSQGGHMEVAPALYQDLDVYGVVSLRSKVAKKSFEAVLGEFDNF
CCCCCCCCCCEEEECCCCCCCCEEECHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCH
DRLFRLRLRQNYWAYIFLTNLVDYNKEFYENYSDLLELTKFRVEKGDISPLEYERLELER
HHHHHHHHHCCCEEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
IQVEKFYRDALVRRQLVEKELRILSGIREAEGIFAFKTEMRFKSLEDLGLRLREITTVNR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHCCCC
PDIAALEERVKEKKLNIDLQRREALGYVQVGGEWRIKGNEHYAGVFATLPLPLNDRGQGK
CCHHHHHHHHHHHHCCCCEEHHHCCCEEEECCEEEECCCCEEEEEEEEECCCCCCCCCCC
VLSAKEEHKKFELALEAKKREVDEEIEASKKELLAREDLLAKYERINLLQKNKQLEQKSR
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
IAYVRGASDQVTFLQAEKNYLTVLRDYYEVLYLYYNAVEIYKAAVGKKTER
EEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA