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The map label for this gene is ygfA [C]

Identifier: 116328734

GI number: 116328734

Start: 2468631

End: 2469155

Strand: Reverse

Name: ygfA [C]

Synonym: LBL_2108

Alternate gene names: 116328734

Gene position: 2469155-2468631 (Counterclockwise)

Preceding gene: 116328735

Following gene: 116328733

Centisome position: 68.31

GC content: 42.86

Gene sequence:

>525_bases
TTGAAATTTCAGTCTAGAAATGCGCTTCGAACTTTACTTACCCTTTTGGCAGAAAGGGAAAAAAAAGATCTGATTATTCT
TGGGTTTTTGAAAAAAATTACGGCCAATGCGCGAAAGATCATCGCCTACGTTCCCGATAAATGGGAAGTGAAGATTGATC
CGAAAACTTTGGATTGGACCGAGAAGGAAATTTATTTCCCAAAGATTACGGATCGGGAATTGGAGTTCGTTCTTCCGGAA
GTTTGGGAAAACGGTCCATTCGGTATTTTGGAACCCAATGGAACAAAAATTCTGAGTCCTCACGAAGCTGAGTGGATTAT
CGTGCCTGCCTTAGGTTATGATGAGTTTGGTTATCGTCTCGGACGCGGAGGGGGCTTTTATGACAGAACCCTTTGTGCAG
TGGATCCGAGTAAGTTGATTGGGCTTACTTACGAGGAACTCTTCCCCGCAAGTTTTGCAAAAGAAGATCACGACATAAGA
GTGGGCCGGGTCATTACAGAGAAAAAAAACTATCAAATCGTCTGA

Upstream 100 bases:

>100_bases
GAAGAGAAAACTCGTAAATTAATTACGATGTTGGAAGAAGGGATCATTGGGGATCTTTGATTTTTCTTTTATTCAAAATT
AAATCCGTTTAACAATCTCG

Downstream 100 bases:

>100_bases
AAAAACGTTAAAATATTGTCTATTTGATAGTATATTGGCTATTCATGTTGTTAGGTTCGACGGCAAGCGGCATGATGAGT
GAATACGATTGCAAGAAACT

Product: 5-formyltetrahydrofolate cyclo-ligase

Products: ADP; phosphate; 5,10-methenyltetrahydrofolate

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKFQSRNALRTLLTLLAEREKKDLIILGFLKKITANARKIIAYVPDKWEVKIDPKTLDWTEKEIYFPKITDRELEFVLPE
VWENGPFGILEPNGTKILSPHEAEWIIVPALGYDEFGYRLGRGGGFYDRTLCAVDPSKLIGLTYEELFPASFAKEDHDIR
VGRVITEKKNYQIV

Sequences:

>Translated_174_residues
MKFQSRNALRTLLTLLAEREKKDLIILGFLKKITANARKIIAYVPDKWEVKIDPKTLDWTEKEIYFPKITDRELEFVLPE
VWENGPFGILEPNGTKILSPHEAEWIIVPALGYDEFGYRLGRGGGFYDRTLCAVDPSKLIGLTYEELFPASFAKEDHDIR
VGRVITEKKNYQIV
>Mature_174_residues
MKFQSRNALRTLLTLLAEREKKDLIILGFLKKITANARKIIAYVPDKWEVKIDPKTLDWTEKEIYFPKITDRELEFVLPE
VWENGPFGILEPNGTKILSPHEAEWIIVPALGYDEFGYRLGRGGGFYDRTLCAVDPSKLIGLTYEELFPASFAKEDHDIR
VGRVITEKKNYQIV

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 6.3.3.2

Molecular weight: Translated: 20103; Mature: 20103

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFQSRNALRTLLTLLAEREKKDLIILGFLKKITANARKIIAYVPDKWEVKIDPKTLDWT
CCCCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHHCCCEEEEEECCCCEEEEECCCCCCCC
EKEIYFPKITDRELEFVLPEVWENGPFGILEPNGTKILSPHEAEWIIVPALGYDEFGYRL
CCEEECCCCCCCCCEEEEHHHHCCCCEEEECCCCCEEECCCCCCEEEEEECCCCHHCEEE
GRGGGFYDRTLCAVDPSKLIGLTYEELFPASFAKEDHDIRVGRVITEKKNYQIV
CCCCCCCCCEEEEECHHHHCCCCHHHHCCHHHCCCCCCEEEEEEEECCCCEEEC
>Mature Secondary Structure
MKFQSRNALRTLLTLLAEREKKDLIILGFLKKITANARKIIAYVPDKWEVKIDPKTLDWT
CCCCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHHCCCEEEEEECCCCEEEEECCCCCCCC
EKEIYFPKITDRELEFVLPEVWENGPFGILEPNGTKILSPHEAEWIIVPALGYDEFGYRL
CCEEECCCCCCCCCEEEEHHHHCCCCEEEECCCCCEEECCCCCCEEEEEECCCCHHCEEE
GRGGGFYDRTLCAVDPSKLIGLTYEELFPASFAKEDHDIRVGRVITEKKNYQIV
CCCCCCCCCEEEEECHHHHCCCCHHHHCCHHHCCCCCCEEEEEEEECCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; 5-formyltetrahydrofolate

Specific reaction: ATP + 5-formyltetrahydrofolate = ADP + phosphate + 5,10-methenyltetrahydrofolate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA