| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116328628
Identifier: 116328628
GI number: 116328628
Start: 2319758
End: 2320447
Strand: Direct
Name: 116328628
Synonym: LBL_1989
Alternate gene names: NA
Gene position: 2319758-2320447 (Clockwise)
Preceding gene: 116328627
Following gene: 116328629
Centisome position: 64.18
GC content: 40.14
Gene sequence:
>690_bases TTGTCCATTTCACAAGTAAATAATTACGATTCAAAAGTACAACCAGTTTTGAGACACGCTCTTAGTAAATTTCTTAAAAA TTCGTCAGAAGGCATTGGGGGCAGCATACCCTTTGTAAGCCAAGATTGGTCGAGCACTAAGGCCGCCTACCGTTTTCTCT CTAACGATCGCGTAAGCGAAAAGGAAATATTGGGAGGCCATTTTCAATCAACACAAGAAAGATGTAATACAGAGAATGGG CCGATTTTAATATTGCATGGTACGACTGAATTTTCGTTTAAGCGAAAGGAAGCAACGGAAGTAGGATTCACTCGACTTGC CATAGCAGGCAAATATTCAGACGGACGGTTGAGATATTACACTGCAAGCGGTATTCTAATGCATTCAAGTTTATCTATTA CAGCGGACGGACTTCCACTTGGTTTGGCCTCAATTAAATTCTGGAATAGGAAGAAATTTAAAGGTTGTAAGGCATTAAAG AAGAAAATCAATCCTACGAGAATGCCGATCGAAAAAAAGGAAAGCTTTCGTTGGTTAGAGAATCTCAAACAATCTACCGC TCTACTGGACCGTCCTGAAAATTGTGTGCATATAGGAGATCGAGAAAGCGACATTTATGAGCTATTTTACTTAGCGAACC AATTGAAAACGAATTTTCTCGTAAGATCCTGCGGGATCGTCTCGCAATAG
Upstream 100 bases:
>100_bases TGTAGGTAATCGATTGCGACCTCCTTGGAGATTTGCCCTAACTTTTGGGATTAATGGTTCTATTTTTTCCCAAAGTCCAT CGGGGATCTCTGAATAATAT
Downstream 100 bases:
>100_bases ACGGGATCATACGATCCGTAAAGTAATGAAAAATTCCAGAGTTAAAGTAACACATCAAATTAAAATCAGAGATGAAAAAG GAATATCGAAAGTTTCGGTC
Product: transposase ISLbp9
Products: NA
Alternate protein names: Transposase IS4 Family Protein; Transposase IS4 Family; IS4 Family Transposase
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MSISQVNNYDSKVQPVLRHALSKFLKNSSEGIGGSIPFVSQDWSSTKAAYRFLSNDRVSEKEILGGHFQSTQERCNTENG PILILHGTTEFSFKRKEATEVGFTRLAIAGKYSDGRLRYYTASGILMHSSLSITADGLPLGLASIKFWNRKKFKGCKALK KKINPTRMPIEKKESFRWLENLKQSTALLDRPENCVHIGDRESDIYELFYLANQLKTNFLVRSCGIVSQ
Sequences:
>Translated_229_residues MSISQVNNYDSKVQPVLRHALSKFLKNSSEGIGGSIPFVSQDWSSTKAAYRFLSNDRVSEKEILGGHFQSTQERCNTENG PILILHGTTEFSFKRKEATEVGFTRLAIAGKYSDGRLRYYTASGILMHSSLSITADGLPLGLASIKFWNRKKFKGCKALK KKINPTRMPIEKKESFRWLENLKQSTALLDRPENCVHIGDRESDIYELFYLANQLKTNFLVRSCGIVSQ >Mature_228_residues SISQVNNYDSKVQPVLRHALSKFLKNSSEGIGGSIPFVSQDWSSTKAAYRFLSNDRVSEKEILGGHFQSTQERCNTENGP ILILHGTTEFSFKRKEATEVGFTRLAIAGKYSDGRLRYYTASGILMHSSLSITADGLPLGLASIKFWNRKKFKGCKALKK KINPTRMPIEKKESFRWLENLKQSTALLDRPENCVHIGDRESDIYELFYLANQLKTNFLVRSCGIVSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25878; Mature: 25747
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISQVNNYDSKVQPVLRHALSKFLKNSSEGIGGSIPFVSQDWSSTKAAYRFLSNDRVSE CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCH KEILGGHFQSTQERCNTENGPILILHGTTEFSFKRKEATEVGFTRLAIAGKYSDGRLRYY HHHHCCHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHCCEEEEEEEECCCCEEEEE TASGILMHSSLSITADGLPLGLASIKFWNRKKFKGCKALKKKINPTRMPIEKKESFRWLE EECCEEEECCCEEEECCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH NLKQSTALLDRPENCVHIGDRESDIYELFYLANQLKTNFLVRSCGIVSQ HHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SISQVNNYDSKVQPVLRHALSKFLKNSSEGIGGSIPFVSQDWSSTKAAYRFLSNDRVSE CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCH KEILGGHFQSTQERCNTENGPILILHGTTEFSFKRKEATEVGFTRLAIAGKYSDGRLRYY HHHHCCHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHCCEEEEEEEECCCCEEEEE TASGILMHSSLSITADGLPLGLASIKFWNRKKFKGCKALKKKINPTRMPIEKKESFRWLE EECCEEEECCCEEEECCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH NLKQSTALLDRPENCVHIGDRESDIYELFYLANQLKTNFLVRSCGIVSQ HHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA