Click here to switch to the map view.

The map label for this gene is 116328587

Identifier: 116328587

GI number: 116328587

Start: 2266968

End: 2268224

Strand: Reverse

Name: 116328587

Synonym: LBL_1944

Alternate gene names: NA

Gene position: 2268224-2266968 (Counterclockwise)

Preceding gene: 116328588

Following gene: 116328586

Centisome position: 62.75

GC content: 36.04

Gene sequence:

>1257_bases
ATGAAACCGAGCGCTTTTACTCGGAATCGTCAACTAACCCTACCGAGGTTGCTGATAGCCATGATAAACTTATTAAACAA
AAGCTTAGCGGTCGAGTTATATAGATATTTTAAGAATTTAGGAAAGAAAGCTGTAACGAAACAGGCGTTTTCCTTTGCGC
GGGAGAATTTAAATCCGCAAGTGTTTGAATCGTTAAACGAAATATTTGTAAACAGCTACTACAAAAATGTAACGAATTGC
AAAACGCATAAAGGTTATATAGTTGCAGCTTGCGACGCAACAGGAATAAGCCTACCTAAAACGAAGGAGTTCGTGAAAGA
TTTTGGCTGTGTAAAAAATCAACTAGGGGAATCGGAATCGCCGAATGCCAATAGTTCGATTATATTTGATATTTATAATG
ATATAATATTAAGTTCTACCGTTGGTCCGCATAGAACGAGTGAAAGGTCAATGGCGTTGCATCATATCGAGAAACTTAGA
TCGATCTCGGCTCTTCAAAATAAGAAATTGATTCTTCTTTTCGACAGGGGCTATCCATCGATGGAACTAATCGGAAAGTT
AATGGCAAACGGAATCCATTTTATCGTTAGAAGCAACACTCGTTGGCTCAAAGAGGCAAAAATTGCAGGGGAATACAAAG
AATACGACAAAGTTAAAAACATTCTTATCACTAACAATATGCAAAAGAAGAAGGAATGGCTTAAGGAATATGCGAATACG
AAAGGAAATCTGTTTTCATTACGTTTTGTCGGCTCAAGATATAAAGACGGACAAGTCGGAATTTTTGTCACCGATCTTCC
CGATTCCGAATTTTCAAGAGAAGCTATTGTTTCCCTCTACGGCAAGCGTTGGAATATAGAAACTCATTTTCGTTTCGAAA
AATATTCTCTTGAATTGGAGAATGTAGCACCCAAAACTTCAATCCGATTTCTTCAAGAATATTATGCAAAAATCTTAACA
TTTAATCTTGCCTCTCTTCTAATCCAAGAAGCGCAAGAAGAATACGATCAATCGATTCAAAACAAAAAAGTAAAAACAAA
ATATGATTATAAAATTACTAGAAATATCGCGATCGGCATTCTAAAAGGAGAACTTCCAAGGTTACTTTCTGGAACTGAAC
CGATGAACTTCGTTTTTGATGAAATGAAAGCCGTACTTATAAAACATCGGCTATCTGTCATTCCAAATAGAACCTTCAAT
AGAAAACATAAAGTTCGAAAACGTAAGTTTGAAATTTATTACGGCAGAGTCTCTTAA

Upstream 100 bases:

>100_bases
AGAATTTAGTACGACAAGAAGACATGGGCAAGAAAGAATTACAATCATAGTCGAATTAGAAGCTTGGATTTATTCCAGAA
AGATTCTGGAAATCGCGCGA

Downstream 100 bases:

>100_bases
ATTGACAGCATTGACCCTTAGGAAGCGTTCCGTTGAGTTGCTACTTGTTTTTGATTATTTTTTGTACTGTTGTCAGCTGT
TTCTCCTTATTTATTTTAAA

Product: transposase ISLbp1

Products: NA

Alternate protein names: Transposase IS4 Family Protein; Transposase; Transposase DDE Domain-Containing Protein; LOW QUALITY PROTEIN Transposase; Transposase IS4 Family; ISLbp1 Transposase

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MKPSAFTRNRQLTLPRLLIAMINLLNKSLAVELYRYFKNLGKKAVTKQAFSFARENLNPQVFESLNEIFVNSYYKNVTNC
KTHKGYIVAACDATGISLPKTKEFVKDFGCVKNQLGESESPNANSSIIFDIYNDIILSSTVGPHRTSERSMALHHIEKLR
SISALQNKKLILLFDRGYPSMELIGKLMANGIHFIVRSNTRWLKEAKIAGEYKEYDKVKNILITNNMQKKKEWLKEYANT
KGNLFSLRFVGSRYKDGQVGIFVTDLPDSEFSREAIVSLYGKRWNIETHFRFEKYSLELENVAPKTSIRFLQEYYAKILT
FNLASLLIQEAQEEYDQSIQNKKVKTKYDYKITRNIAIGILKGELPRLLSGTEPMNFVFDEMKAVLIKHRLSVIPNRTFN
RKHKVRKRKFEIYYGRVS

Sequences:

>Translated_418_residues
MKPSAFTRNRQLTLPRLLIAMINLLNKSLAVELYRYFKNLGKKAVTKQAFSFARENLNPQVFESLNEIFVNSYYKNVTNC
KTHKGYIVAACDATGISLPKTKEFVKDFGCVKNQLGESESPNANSSIIFDIYNDIILSSTVGPHRTSERSMALHHIEKLR
SISALQNKKLILLFDRGYPSMELIGKLMANGIHFIVRSNTRWLKEAKIAGEYKEYDKVKNILITNNMQKKKEWLKEYANT
KGNLFSLRFVGSRYKDGQVGIFVTDLPDSEFSREAIVSLYGKRWNIETHFRFEKYSLELENVAPKTSIRFLQEYYAKILT
FNLASLLIQEAQEEYDQSIQNKKVKTKYDYKITRNIAIGILKGELPRLLSGTEPMNFVFDEMKAVLIKHRLSVIPNRTFN
RKHKVRKRKFEIYYGRVS
>Mature_418_residues
MKPSAFTRNRQLTLPRLLIAMINLLNKSLAVELYRYFKNLGKKAVTKQAFSFARENLNPQVFESLNEIFVNSYYKNVTNC
KTHKGYIVAACDATGISLPKTKEFVKDFGCVKNQLGESESPNANSSIIFDIYNDIILSSTVGPHRTSERSMALHHIEKLR
SISALQNKKLILLFDRGYPSMELIGKLMANGIHFIVRSNTRWLKEAKIAGEYKEYDKVKNILITNNMQKKKEWLKEYANT
KGNLFSLRFVGSRYKDGQVGIFVTDLPDSEFSREAIVSLYGKRWNIETHFRFEKYSLELENVAPKTSIRFLQEYYAKILT
FNLASLLIQEAQEEYDQSIQNKKVKTKYDYKITRNIAIGILKGELPRLLSGTEPMNFVFDEMKAVLIKHRLSVIPNRTFN
RKHKVRKRKFEIYYGRVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48499; Mature: 48499

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPSAFTRNRQLTLPRLLIAMINLLNKSLAVELYRYFKNLGKKAVTKQAFSFARENLNPQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VFESLNEIFVNSYYKNVTNCKTHKGYIVAACDATGISLPKTKEFVKDFGCVKNQLGESES
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCC
PNANSSIIFDIYNDIILSSTVGPHRTSERSMALHHIEKLRSISALQNKKLILLFDRGYPS
CCCCCEEEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
MELIGKLMANGIHFIVRSNTRWLKEAKIAGEYKEYDKVKNILITNNMQKKKEWLKEYANT
HHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHCC
KGNLFSLRFVGSRYKDGQVGIFVTDLPDSEFSREAIVSLYGKRWNIETHFRFEKYSLELE
CCCEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEEHEEEHH
NVAPKTSIRFLQEYYAKILTFNLASLLIQEAQEEYDQSIQNKKVKTKYDYKITRNIAIGI
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECEEEECCEEEEE
LKGELPRLLSGTEPMNFVFDEMKAVLIKHRLSVIPNRTFNRKHKVRKRKFEIYYGRVS
ECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEEEEEECC
>Mature Secondary Structure
MKPSAFTRNRQLTLPRLLIAMINLLNKSLAVELYRYFKNLGKKAVTKQAFSFARENLNPQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VFESLNEIFVNSYYKNVTNCKTHKGYIVAACDATGISLPKTKEFVKDFGCVKNQLGESES
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCC
PNANSSIIFDIYNDIILSSTVGPHRTSERSMALHHIEKLRSISALQNKKLILLFDRGYPS
CCCCCEEEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
MELIGKLMANGIHFIVRSNTRWLKEAKIAGEYKEYDKVKNILITNNMQKKKEWLKEYANT
HHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHCC
KGNLFSLRFVGSRYKDGQVGIFVTDLPDSEFSREAIVSLYGKRWNIETHFRFEKYSLELE
CCCEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEEHEEEHH
NVAPKTSIRFLQEYYAKILTFNLASLLIQEAQEEYDQSIQNKKVKTKYDYKITRNIAIGI
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECEEEECCEEEEE
LKGELPRLLSGTEPMNFVFDEMKAVLIKHRLSVIPNRTFNRKHKVRKRKFEIYYGRVS
ECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA