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The map label for this gene is pdtaS [H]

Identifier: 116328549

GI number: 116328549

Start: 2220277

End: 2221689

Strand: Direct

Name: pdtaS [H]

Synonym: LBL_1904

Alternate gene names: 116328549

Gene position: 2220277-2221689 (Clockwise)

Preceding gene: 116328547

Following gene: 116328550

Centisome position: 61.43

GC content: 41.26

Gene sequence:

>1413_bases
ATGGAGTCGATCTCGATCACGGAAAAACACTATCAACTTCTTTTTGATTTTTCCCAGGACGGACTCGTGATTCACTCTGA
AGGTAAAGTTTTAAAAGCGAACGATGCATTGATTCGAATGCTCGGCTACGACTCGATTGAGGAAGTGATCGGAAGACCGA
TTCTCCAATTCATTCACCACCGGTCCCAAAATATCGTTAAACAAAGAATTCAGAAAATGATCCAGGAAGGAGTGGGAGTC
GGAATCGTTGAAGAGGAATTTATCAGAAAAGACGGTTCTACTTTATTCGTGGAAGTAGCCTCTACCACTTTTTTTGAAAG
TGATCGTCAGTATTTCCAGGCAATCGTACGAGATATCAATTCTAAAAAACGGGCCGAACTTGAACTAGAAAGGCTTCGTT
CCAAACTGAAGGTAACTCAAGAGAGGCTTTGTGGAGTGATCGAAGGAACGAAGGATGCCATCTGTGCGGTGGACATTAAC
TTTCGTGTGATCGCTTTTAATTCTTCCTTTGAACTTAGTTTTTGGAAACTCTACGGCAAAAAAATCGAAGAAGGAAATCT
TCTTCCCGAGCTCATTTGGGATCCCCTCGAGCGGAGTGTGGTGATCGAAAATTGGAGCCGCGCTCTTCGGGGAGAAGTAT
ATACCACGGAAAGAACGATGCACGGTTTAGTTCAGGATGTCGCGATATTCGAAATCAGCTATAGTTCCATTCGAGATTCT
TCTCATAACCTAATCGGCGCGACTCAGATCATTCGGGATATTACCGAAAGAAAGAATGATGAGGAAAAACTGAAAAAAAC
TCTGGAAGAAAAGGAAGTAATGTTGAAAGAGATTCATCATAGAGTGAAGAACAATCTTCAAGTGGTGGCAAGTCTTTTGG
GTTTACAGGCCGAATATTCTCAAAACGAAAAGATCTCTCTGATTCTCAAGGAATGCGAACGTAGAATTCAGTCTATGGCT
TTGATTCATAAAGAACTCTATCAATCCGAGAATATTACAAAAATCGATTTTTGTGATTATCTCAACACCCTTTTGATCAG
CCTTCTTCATTCTTTTGGAAAAGAGAAGAAAGTGGAATTCGATATCTCTTCCAAACCGAATTTTGTCTCGATCGAAACGG
CGATTCCATTGGGACTTATCGTAAACGAACTCGTGACTAATTCCTTGAAGTATGCGTTTTTGAACGAAAGGGAAGGTCGA
ATTTCAGTGAAACTTAGATTGGACATGGGAGAATCCGTTTTGGAAATTGGAGACAACGGGATCGGTATGCCTGAAAAATT
CGACCTTGACAAATCCGAGTCGTTGGGGCTCAGACTCGTGGAAATTCTTTCCAAACAACTCAGGGGTAAGTTTGTGCTTC
TACCCACAGGAGAGGAAAGAGGAACGAAATTTCAAATCCGATTTAAAACTTAA

Upstream 100 bases:

>100_bases
TTCGGGAATAAGGCATCCGGTTTCAAGGAAACATGGCGCTTGAGCTTTCATCAGATATTTTGTAATAAAAAAATCAATTT
TGAGGATAGTCGTAAATAAA

Downstream 100 bases:

>100_bases
AAACACTTGTCTTCAGTAATTCACTCCGGAATCTGAAAGTATCCGGTCTATGAATTTAATATCTGTCGACAAGATCTCCA
AAGAAATCGGTTCTAAAGTT

Product: Signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MESISITEKHYQLLFDFSQDGLVIHSEGKVLKANDALIRMLGYDSIEEVIGRPILQFIHHRSQNIVKQRIQKMIQEGVGV
GIVEEEFIRKDGSTLFVEVASTTFFESDRQYFQAIVRDINSKKRAELELERLRSKLKVTQERLCGVIEGTKDAICAVDIN
FRVIAFNSSFELSFWKLYGKKIEEGNLLPELIWDPLERSVVIENWSRALRGEVYTTERTMHGLVQDVAIFEISYSSIRDS
SHNLIGATQIIRDITERKNDEEKLKKTLEEKEVMLKEIHHRVKNNLQVVASLLGLQAEYSQNEKISLILKECERRIQSMA
LIHKELYQSENITKIDFCDYLNTLLISLLHSFGKEKKVEFDISSKPNFVSIETAIPLGLIVNELVTNSLKYAFLNEREGR
ISVKLRLDMGESVLEIGDNGIGMPEKFDLDKSESLGLRLVEILSKQLRGKFVLLPTGEERGTKFQIRFKT

Sequences:

>Translated_470_residues
MESISITEKHYQLLFDFSQDGLVIHSEGKVLKANDALIRMLGYDSIEEVIGRPILQFIHHRSQNIVKQRIQKMIQEGVGV
GIVEEEFIRKDGSTLFVEVASTTFFESDRQYFQAIVRDINSKKRAELELERLRSKLKVTQERLCGVIEGTKDAICAVDIN
FRVIAFNSSFELSFWKLYGKKIEEGNLLPELIWDPLERSVVIENWSRALRGEVYTTERTMHGLVQDVAIFEISYSSIRDS
SHNLIGATQIIRDITERKNDEEKLKKTLEEKEVMLKEIHHRVKNNLQVVASLLGLQAEYSQNEKISLILKECERRIQSMA
LIHKELYQSENITKIDFCDYLNTLLISLLHSFGKEKKVEFDISSKPNFVSIETAIPLGLIVNELVTNSLKYAFLNEREGR
ISVKLRLDMGESVLEIGDNGIGMPEKFDLDKSESLGLRLVEILSKQLRGKFVLLPTGEERGTKFQIRFKT
>Mature_470_residues
MESISITEKHYQLLFDFSQDGLVIHSEGKVLKANDALIRMLGYDSIEEVIGRPILQFIHHRSQNIVKQRIQKMIQEGVGV
GIVEEEFIRKDGSTLFVEVASTTFFESDRQYFQAIVRDINSKKRAELELERLRSKLKVTQERLCGVIEGTKDAICAVDIN
FRVIAFNSSFELSFWKLYGKKIEEGNLLPELIWDPLERSVVIENWSRALRGEVYTTERTMHGLVQDVAIFEISYSSIRDS
SHNLIGATQIIRDITERKNDEEKLKKTLEEKEVMLKEIHHRVKNNLQVVASLLGLQAEYSQNEKISLILKECERRIQSMA
LIHKELYQSENITKIDFCDYLNTLLISLLHSFGKEKKVEFDISSKPNFVSIETAIPLGLIVNELVTNSLKYAFLNEREGR
ISVKLRLDMGESVLEIGDNGIGMPEKFDLDKSESLGLRLVEILSKQLRGKFVLLPTGEERGTKFQIRFKT

Specific function: Member of the two-component regulatory system pdtaR/pdtaS. Autophosphorylates, probably on a histidine residue, and transfers its phosphate group to pdtaR [H]

COG id: COG3920

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR022066
- InterPro:   IPR011495
- InterPro:   IPR005467 [H]

Pfam domain/function: PF12282 H_kinase_N; PF02518 HATPase_c; PF07568 HisKA_2 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 54046; Mature: 54046

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESISITEKHYQLLFDFSQDGLVIHSEGKVLKANDALIRMLGYDSIEEVIGRPILQFIHH
CCCCCCCHHHHHEEEEECCCCEEEECCCCEEECCHHHHHHHCCCHHHHHHHHHHHHHHHH
RSQNIVKQRIQKMIQEGVGVGIVEEEFIRKDGSTLFVEVASTTFFESDRQYFQAIVRDIN
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCC
SKKRAELELERLRSKLKVTQERLCGVIEGTKDAICAVDINFRVIAFNSSFELSFWKLYGK
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCCHHHHHHCC
KIEEGNLLPELIWDPLERSVVIENWSRALRGEVYTTERTMHGLVQDVAIFEISYSSIRDS
CCCCCCCCHHHHHCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHEEEEHHHHCCC
SHNLIGATQIIRDITERKNDEEKLKKTLEEKEVMLKEIHHRVKNNLQVVASLLGLQAEYS
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC
QNEKISLILKECERRIQSMALIHKELYQSENITKIDFCDYLNTLLISLLHSFGKEKKVEF
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCEEEE
DISSKPNFVSIETAIPLGLIVNELVTNSLKYAFLNEREGRISVKLRLDMGESVLEIGDNG
EECCCCCEEEEEHHCHHHHHHHHHHHHHHHEEEECCCCCEEEEEEEECCCCHHHHHCCCC
IGMPEKFDLDKSESLGLRLVEILSKQLRGKFVLLPTGEERGTKFQIRFKT
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECC
>Mature Secondary Structure
MESISITEKHYQLLFDFSQDGLVIHSEGKVLKANDALIRMLGYDSIEEVIGRPILQFIHH
CCCCCCCHHHHHEEEEECCCCEEEECCCCEEECCHHHHHHHCCCHHHHHHHHHHHHHHHH
RSQNIVKQRIQKMIQEGVGVGIVEEEFIRKDGSTLFVEVASTTFFESDRQYFQAIVRDIN
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCC
SKKRAELELERLRSKLKVTQERLCGVIEGTKDAICAVDINFRVIAFNSSFELSFWKLYGK
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCCHHHHHHCC
KIEEGNLLPELIWDPLERSVVIENWSRALRGEVYTTERTMHGLVQDVAIFEISYSSIRDS
CCCCCCCCHHHHHCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHEEEEHHHHCCC
SHNLIGATQIIRDITERKNDEEKLKKTLEEKEVMLKEIHHRVKNNLQVVASLLGLQAEYS
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC
QNEKISLILKECERRIQSMALIHKELYQSENITKIDFCDYLNTLLISLLHSFGKEKKVEF
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCEEEE
DISSKPNFVSIETAIPLGLIVNELVTNSLKYAFLNEREGRISVKLRLDMGESVLEIGDNG
EECCCCCEEEEEHHCHHHHHHHHHHHHHHHEEEECCCCCEEEEEEEECCCCHHHHHCCCC
IGMPEKFDLDKSESLGLRLVEILSKQLRGKFVLLPTGEERGTKFQIRFKT
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]