Click here to switch to the map view.

The map label for this gene is 116328438

Identifier: 116328438

GI number: 116328438

Start: 2074821

End: 2075378

Strand: Reverse

Name: 116328438

Synonym: LBL_1780

Alternate gene names: NA

Gene position: 2075378-2074821 (Counterclockwise)

Preceding gene: 116328439

Following gene: 116328437

Centisome position: 57.42

GC content: 39.25

Gene sequence:

>558_bases
TTGGATTCCTCAAAGAAGAATACGCCTATCAAGGGAAAATTGGCCAAACCACCCGGAGCTTCTTTTTTTATCGTGGTCGT
TTACGAGAATGCGGAAATCTTCTATTCAATCAAAACAAAGACCGAAAAAAAATTTTCCGCAACTTTGTATGAAAGTAACT
CAATGCCTGCTTGGAAGGATCCGGAAGAGGAACTTTGGAATCAGTCTCCTGGAAGACACACTAAAATCCTTTCCTTCAAA
AGAAGAATTCATAGGGAAGAACTTCCTTCCATTCAGAAAGAATGTCTCTCGATTCAAAACGCTGCAATTGAAAGAGATAG
GGGCGTTCGTATTTTTCCGGGATATCTTTGCAACCATTCCGTCGTGATTTCGAGTATCCAAGACGATTTCCATAGGATTT
ATCTATTCAACGGAGTGTATGCCGAAACGGTTTACAACTATCAAAAACAAAAAATGGTCTATCGTGAAACGGCGCCTTCC
TTTTTCAAAACGACGGAAGCGGTTTACTTTTTTACGAGTTTAAGAGAATCCTATGTTCAGAATATCAGTAAAGCATAA

Upstream 100 bases:

>100_bases
GGATTTTTGACGGATCCCACCCCGGAAATTCCGGATGGAAGGTGGTTGAATAAAATAATTCTGGATTATTTCGATTCGAA
AACGAATTCTGGGAGTTGAT

Downstream 100 bases:

>100_bases
TATTGTTCCTTTTGCATTCTTATTTCACCTGTTGTCTTTTTCGGGGGCCTGTGTTCCCGTGCAACTGGAAATAACTTCCG
TCACTCTCTGCGATCATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MDSSKKNTPIKGKLAKPPGASFFIVVVYENAEIFYSIKTKTEKKFSATLYESNSMPAWKDPEEELWNQSPGRHTKILSFK
RRIHREELPSIQKECLSIQNAAIERDRGVRIFPGYLCNHSVVISSIQDDFHRIYLFNGVYAETVYNYQKQKMVYRETAPS
FFKTTEAVYFFTSLRESYVQNISKA

Sequences:

>Translated_185_residues
MDSSKKNTPIKGKLAKPPGASFFIVVVYENAEIFYSIKTKTEKKFSATLYESNSMPAWKDPEEELWNQSPGRHTKILSFK
RRIHREELPSIQKECLSIQNAAIERDRGVRIFPGYLCNHSVVISSIQDDFHRIYLFNGVYAETVYNYQKQKMVYRETAPS
FFKTTEAVYFFTSLRESYVQNISKA
>Mature_185_residues
MDSSKKNTPIKGKLAKPPGASFFIVVVYENAEIFYSIKTKTEKKFSATLYESNSMPAWKDPEEELWNQSPGRHTKILSFK
RRIHREELPSIQKECLSIQNAAIERDRGVRIFPGYLCNHSVVISSIQDDFHRIYLFNGVYAETVYNYQKQKMVYRETAPS
FFKTTEAVYFFTSLRESYVQNISKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21547; Mature: 21547

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSSKKNTPIKGKLAKPPGASFFIVVVYENAEIFYSIKTKTEKKFSATLYESNSMPAWKD
CCCCCCCCCCCCEECCCCCCCEEEEEEEECCEEEEEEECCCCCHHEEEEEECCCCCCCCC
PEEELWNQSPGRHTKILSFKRRIHREELPSIQKECLSIQNAAIERDRGVRIFPGYLCNHS
CHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEECCCHHCCCH
VVISSIQDDFHRIYLFNGVYAETVYNYQKQKMVYRETAPSFFKTTEAVYFFTSLRESYVQ
HEEHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
NISKA
HHHCC
>Mature Secondary Structure
MDSSKKNTPIKGKLAKPPGASFFIVVVYENAEIFYSIKTKTEKKFSATLYESNSMPAWKD
CCCCCCCCCCCCEECCCCCCCEEEEEEEECCEEEEEEECCCCCHHEEEEEECCCCCCCCC
PEEELWNQSPGRHTKILSFKRRIHREELPSIQKECLSIQNAAIERDRGVRIFPGYLCNHS
CHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEECCCHHCCCH
VVISSIQDDFHRIYLFNGVYAETVYNYQKQKMVYRETAPSFFKTTEAVYFFTSLRESYVQ
HEEHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
NISKA
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA