Click here to switch to the map view.

The map label for this gene is 116328304

Identifier: 116328304

GI number: 116328304

Start: 1923115

End: 1923744

Strand: Reverse

Name: 116328304

Synonym: LBL_1640

Alternate gene names: NA

Gene position: 1923744-1923115 (Counterclockwise)

Preceding gene: 116328305

Following gene: 116328303

Centisome position: 53.22

GC content: 44.44

Gene sequence:

>630_bases
ATGATACCGAACAGCAACAGCCGTAAATCCGTTTCTTTCCGGATCGCAAAAATCATACGTCAATTCGGATTCTACAAAAC
GAATTTGCATCGTAACGACGAAACTCGTTCGATCGGAGATTGCGCACATTCGTCGAAATTGATCCGAAGCGGTTTTAATT
TGATCGAGGTTTCCATCGCACTCGCGTTAGCCGGAATTTCGATGACATACACGTACATGGTTATCGCCAACGGAATCAGA
CAACAAAGAATGGCGACTGTAATCTCGAACGCGGTTCATCTCGCTAAAATTAAAATGGCCCAAATCGATTCCGTATCGGT
TCTTCAATCCGATAAAACCACGGGTGATATTCCGGGTTATCCCGGATACAGTTTTGAAACGATGATTAATGAGGAAGAGA
TGGATCTTATGAAACTTGCCGGAAAAGAAAACAAAAAACCGGAGGATCTGCTCGGTGGTCGGGATTCGGAGATGAATAAA
TTGATCATGCAGAGATCGGGACAGGCAAATCAGGGAGCGGCTACCGTCGGAATCATCCGAGTTTTCAGAATTAAGGTCAC
GATTAAATACCCCACTGGAAATGGAACGGAATCCTATACGGCGGAAACGTTTAAGTCCGCGCAATATTAA

Upstream 100 bases:

>100_bases
TTAATCCTTTATCGATATGGAGGGAAAGTTTCCGTGTTGGAAGGAGAGCAGTTTCATACTTCTTCGAATTTGACGACCGA
TAAAAATTGGAAAGAGCAGG

Downstream 100 bases:

>100_bases
GAATTTAAAATGAAAATGAAGAATGCCCACTTCAAACGAAACGGTTTTACCTTGATCGAAATTTCGATCGTGGTGATGAT
TTTGGGCGTCATATTTGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MIPNSNSRKSVSFRIAKIIRQFGFYKTNLHRNDETRSIGDCAHSSKLIRSGFNLIEVSIALALAGISMTYTYMVIANGIR
QQRMATVISNAVHLAKIKMAQIDSVSVLQSDKTTGDIPGYPGYSFETMINEEEMDLMKLAGKENKKPEDLLGGRDSEMNK
LIMQRSGQANQGAATVGIIRVFRIKVTIKYPTGNGTESYTAETFKSAQY

Sequences:

>Translated_209_residues
MIPNSNSRKSVSFRIAKIIRQFGFYKTNLHRNDETRSIGDCAHSSKLIRSGFNLIEVSIALALAGISMTYTYMVIANGIR
QQRMATVISNAVHLAKIKMAQIDSVSVLQSDKTTGDIPGYPGYSFETMINEEEMDLMKLAGKENKKPEDLLGGRDSEMNK
LIMQRSGQANQGAATVGIIRVFRIKVTIKYPTGNGTESYTAETFKSAQY
>Mature_209_residues
MIPNSNSRKSVSFRIAKIIRQFGFYKTNLHRNDETRSIGDCAHSSKLIRSGFNLIEVSIALALAGISMTYTYMVIANGIR
QQRMATVISNAVHLAKIKMAQIDSVSVLQSDKTTGDIPGYPGYSFETMINEEEMDLMKLAGKENKKPEDLLGGRDSEMNK
LIMQRSGQANQGAATVGIIRVFRIKVTIKYPTGNGTESYTAETFKSAQY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23172; Mature: 23172

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPNSNSRKSVSFRIAKIIRQFGFYKTNLHRNDETRSIGDCAHSSKLIRSGFNLIEVSIA
CCCCCCCCCHHHHHHHHHHHHHCCEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
LALAGISMTYTYMVIANGIRQQRMATVISNAVHLAKIKMAQIDSVSVLQSDKTTGDIPGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCC
PGYSFETMINEEEMDLMKLAGKENKKPEDLLGGRDSEMNKLIMQRSGQANQGAATVGIIR
CCCCHHHHCCHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHEEE
VFRIKVTIKYPTGNGTESYTAETFKSAQY
EEEEEEEEEECCCCCCCCHHHHHHHCCCC
>Mature Secondary Structure
MIPNSNSRKSVSFRIAKIIRQFGFYKTNLHRNDETRSIGDCAHSSKLIRSGFNLIEVSIA
CCCCCCCCCHHHHHHHHHHHHHCCEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
LALAGISMTYTYMVIANGIRQQRMATVISNAVHLAKIKMAQIDSVSVLQSDKTTGDIPGY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCC
PGYSFETMINEEEMDLMKLAGKENKKPEDLLGGRDSEMNKLIMQRSGQANQGAATVGIIR
CCCCHHHHCCHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHEEE
VFRIKVTIKYPTGNGTESYTAETFKSAQY
EEEEEEEEEECCCCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA