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The map label for this gene is 116328298

Identifier: 116328298

GI number: 116328298

Start: 1915969

End: 1916499

Strand: Direct

Name: 116328298

Synonym: LBL_1633

Alternate gene names: NA

Gene position: 1915969-1916499 (Clockwise)

Preceding gene: 116328297

Following gene: 116328341

Centisome position: 53.01

GC content: 34.09

Gene sequence:

>531_bases
ATGAAACTATCTTTAGAGGAACGTAAGGTTATGATTAAGGTATTTCGAGAAAGATACAGATACGCCACTAAGAAAGAAAA
GATAAGCATACTCAACGAGTTCGTGAGCCTGTCGGGCTTTAACAGAAATTATGCTTCTCAAGTTCTTAGAAAAAAAGAAG
TTCTAAAAAAACTTTCGACTAAACCCAAAGCACAGAATAAAAGAACAGTTTACTATGATGCATCTGTTCGAAAAGTTTTA
GAAGATCTCTGGAAACTTTTGGATCACATTTGTAGTAAAAGATTAGTCCACGCAATTCCAGAAACAATTAAGAATCTAGA
GAGGTTTCAGACCTATAAAATTTCTAAAGAAATAAAACAAAAACTGTTAAAAATCAGTGCTTCCACAATTGAAAGGCTTT
TAGTTCCAATTCAAAAAAAGCTTGGAATCAAAGGAACCTCGATGACGAAAAAGTGGACACCTTTAAAGCGAAGAATAGAG
GTAAAAGGTGAGAATGAAAGGCAGAAGAAAATATTCCCCGGAATTTCGTGA

Upstream 100 bases:

>100_bases
CATTTAAAAATATACTTGAAACACTGAACGTTTCCTCAACTAAAAACCTACACGAAACCTAATCAAAAATCAGCACTCTT
TTAAGTGAGAGGCTGTAAAC

Downstream 100 bases:

>100_bases
ACAAGCGGTAAACCGGACGTTAAGCGGATCGTTTACGATAAAAGAAGTAGCGAATTCATTAGAAATTAGTTACTTTATAT
TGAGACAATGGAGGGCAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MKLSLEERKVMIKVFRERYRYATKKEKISILNEFVSLSGFNRNYASQVLRKKEVLKKLSTKPKAQNKRTVYYDASVRKVL
EDLWKLLDHICSKRLVHAIPETIKNLERFQTYKISKEIKQKLLKISASTIERLLVPIQKKLGIKGTSMTKKWTPLKRRIE
VKGENERQKKIFPGIS

Sequences:

>Translated_176_residues
MKLSLEERKVMIKVFRERYRYATKKEKISILNEFVSLSGFNRNYASQVLRKKEVLKKLSTKPKAQNKRTVYYDASVRKVL
EDLWKLLDHICSKRLVHAIPETIKNLERFQTYKISKEIKQKLLKISASTIERLLVPIQKKLGIKGTSMTKKWTPLKRRIE
VKGENERQKKIFPGIS
>Mature_176_residues
MKLSLEERKVMIKVFRERYRYATKKEKISILNEFVSLSGFNRNYASQVLRKKEVLKKLSTKPKAQNKRTVYYDASVRKVL
EDLWKLLDHICSKRLVHAIPETIKNLERFQTYKISKEIKQKLLKISASTIERLLVPIQKKLGIKGTSMTKKWTPLKRRIE
VKGENERQKKIFPGIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 20820; Mature: 20820

Theoretical pI: Translated: 11.07; Mature: 11.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSLEERKVMIKVFRERYRYATKKEKISILNEFVSLSGFNRNYASQVLRKKEVLKKLST
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
KPKAQNKRTVYYDASVRKVLEDLWKLLDHICSKRLVHAIPETIKNLERFQTYKISKEIKQ
CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLLKISASTIERLLVPIQKKLGIKGTSMTKKWTPLKRRIEVKGENERQKKIFPGIS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCC
>Mature Secondary Structure
MKLSLEERKVMIKVFRERYRYATKKEKISILNEFVSLSGFNRNYASQVLRKKEVLKKLST
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
KPKAQNKRTVYYDASVRKVLEDLWKLLDHICSKRLVHAIPETIKNLERFQTYKISKEIKQ
CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLLKISASTIERLLVPIQKKLGIKGTSMTKKWTPLKRRIEVKGENERQKKIFPGIS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]