Click here to switch to the map view.

The map label for this gene is 116328243

Identifier: 116328243

GI number: 116328243

Start: 1834453

End: 1835265

Strand: Reverse

Name: 116328243

Synonym: LBL_1570

Alternate gene names: NA

Gene position: 1835265-1834453 (Counterclockwise)

Preceding gene: 116328252

Following gene: 116328242

Centisome position: 50.78

GC content: 35.67

Gene sequence:

>813_bases
ATGAAACGTTTCTTTTTTGTATCCACTTTCTTCCTGTTATTTTGGAACCAATCAATAGCGTCGGAAACGTTTCCTATTGA
GCTGATAACGCTGTTAGGAGATCCGACAGCCGTGGAAAAATCTTGGCTCGTAGAGTGGATTCCCGTTTGGAAAAAAGAGG
AAGAATCCAGACTAGAAACATATTTAAAAAAAATTCTTTCTATCCAATTGAAAAATCCTTCTTTCCCTCCCAAAGAAAAG
CTCAAAACCGAACTCAAAAAAATCCCGAATTTAGGCGGAATACGAATTAGAAATCAAAAGTCCACTCTGTTTTATCAAGT
TTCTTACGGAGTGGAATTTCCGAATCTTTCTCAGATTCGTAGTTTTACGATAAAAGGCTACTACGTCGATTTTTATCTCG
GAAGACAAACCGGAATTGTACCTGTGGAATTCCTAAAAACCGGTTTAACATGTGCATTTTATTATTTCTCGGAAAATGAA
ACCCTTCTCTACTCTCAAGAATCTCCCGAATGGAAAATTAAAACTGAAAAATCTTTAGGAGAATTGAACTCCTTTTTCAA
AATTCGAAATACAAATTGTCAGGGTTGTGAAAAGATTCGATTGGTTGACGGCACGTTATTTTTCTTTCCCTCCCAGTCGG
GAATTTCCTTTTGGTTTCGCTTGGGAATCAATTTTTTTCTTTTAGTCTGTGCCTTTATTCTTACTATTTTTTTCTTTCGA
AATTTTTGGATTCGCAATAGGGAAACACTCCGAAAAGCGATCCAAACTAAAAAGAACTTGGATCAAGAAAAAAAATCGAT
TCTTTCTCAATAA

Upstream 100 bases:

>100_bases
ATTCATCTTCATTTCCGTTCTTTAAGTTTTAGGAGAAACATTGAATTCTCATGTTTTAGACAAGACTTGAACTTATCGTG
ACATCATTCAGAGGCCTCCT

Downstream 100 bases:

>100_bases
TACTCAAATTTTTGCTATACAAATAATTACATATATTTTACATTCGTTTTCAGAAAACCGGGTGACATAAACCCGAGCTT
GTGAAAAAAATTGAAACAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MKRFFFVSTFFLLFWNQSIASETFPIELITLLGDPTAVEKSWLVEWIPVWKKEEESRLETYLKKILSIQLKNPSFPPKEK
LKTELKKIPNLGGIRIRNQKSTLFYQVSYGVEFPNLSQIRSFTIKGYYVDFYLGRQTGIVPVEFLKTGLTCAFYYFSENE
TLLYSQESPEWKIKTEKSLGELNSFFKIRNTNCQGCEKIRLVDGTLFFFPSQSGISFWFRLGINFFLLVCAFILTIFFFR
NFWIRNRETLRKAIQTKKNLDQEKKSILSQ

Sequences:

>Translated_270_residues
MKRFFFVSTFFLLFWNQSIASETFPIELITLLGDPTAVEKSWLVEWIPVWKKEEESRLETYLKKILSIQLKNPSFPPKEK
LKTELKKIPNLGGIRIRNQKSTLFYQVSYGVEFPNLSQIRSFTIKGYYVDFYLGRQTGIVPVEFLKTGLTCAFYYFSENE
TLLYSQESPEWKIKTEKSLGELNSFFKIRNTNCQGCEKIRLVDGTLFFFPSQSGISFWFRLGINFFLLVCAFILTIFFFR
NFWIRNRETLRKAIQTKKNLDQEKKSILSQ
>Mature_270_residues
MKRFFFVSTFFLLFWNQSIASETFPIELITLLGDPTAVEKSWLVEWIPVWKKEEESRLETYLKKILSIQLKNPSFPPKEK
LKTELKKIPNLGGIRIRNQKSTLFYQVSYGVEFPNLSQIRSFTIKGYYVDFYLGRQTGIVPVEFLKTGLTCAFYYFSENE
TLLYSQESPEWKIKTEKSLGELNSFFKIRNTNCQGCEKIRLVDGTLFFFPSQSGISFWFRLGINFFLLVCAFILTIFFFR
NFWIRNRETLRKAIQTKKNLDQEKKSILSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31932; Mature: 31932

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFFFVSTFFLLFWNQSIASETFPIELITLLGDPTAVEKSWLVEWIPVWKKEEESRLET
CCEEHHHHHHHHHHHCHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHH
YLKKILSIQLKNPSFPPKEKLKTELKKIPNLGGIRIRNQKSTLFYQVSYGVEFPNLSQIR
HHHHHHEEEECCCCCCCHHHHHHHHHHCCCCCCEEEECCCCEEEEEEECCCCCCCHHHHH
SFTIKGYYVDFYLGRQTGIVPVEFLKTGLTCAFYYFSENETLLYSQESPEWKIKTEKSLG
EEEEEEEEEEEEECCCCCCEEHHHHHCCCEEEEEEEECCCEEEEECCCCCEEEEEHHHHH
ELNSFFKIRNTNCQGCEKIRLVDGTLFFFPSQSGISFWFRLGINFFLLVCAFILTIFFFR
HHHHHEEECCCCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NFWIRNRETLRKAIQTKKNLDQEKKSILSQ
HHHCCCHHHHHHHHHHHHCCCHHHHHHHCC
>Mature Secondary Structure
MKRFFFVSTFFLLFWNQSIASETFPIELITLLGDPTAVEKSWLVEWIPVWKKEEESRLET
CCEEHHHHHHHHHHHCHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHH
YLKKILSIQLKNPSFPPKEKLKTELKKIPNLGGIRIRNQKSTLFYQVSYGVEFPNLSQIR
HHHHHHEEEECCCCCCCHHHHHHHHHHCCCCCCEEEECCCCEEEEEEECCCCCCCHHHHH
SFTIKGYYVDFYLGRQTGIVPVEFLKTGLTCAFYYFSENETLLYSQESPEWKIKTEKSLG
EEEEEEEEEEEEECCCCCCEEHHHHHCCCEEEEEEEECCCEEEEECCCCCEEEEEHHHHH
ELNSFFKIRNTNCQGCEKIRLVDGTLFFFPSQSGISFWFRLGINFFLLVCAFILTIFFFR
HHHHHEEECCCCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NFWIRNRETLRKAIQTKKNLDQEKKSILSQ
HHHCCCHHHHHHHHHHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA