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The map label for this gene is 116328220

Identifier: 116328220

GI number: 116328220

Start: 1806278

End: 1807597

Strand: Reverse

Name: 116328220

Synonym: LBL_1544

Alternate gene names: NA

Gene position: 1807597-1806278 (Counterclockwise)

Preceding gene: 116328222

Following gene: 116328216

Centisome position: 50.01

GC content: 40.68

Gene sequence:

>1320_bases
ATGGAAGCCACAGATTCAATCCGCCAAAATTCTACCATTCCACTTCTGGAAGAAATGGAAAGGAAATACAAATTCATTCC
TATGGAGGCCATCGTCAAACAAGATATCCTCAGACAAGGAATCCATTTTCTTAAAGAAGCCTTTGATGTAACAGGAAAAT
ACAAAACCAAAGATTATTTCATATTCTCCTTTGATCATATTCCATTTTCAGAATTAGGAGAAGGTACAGACGTCAAAGCT
CCCGAAGAGATAAAAGTTTCTAATGGTCATTTCAGTCTTCTTCCTACGGTAATTTCCACACGGAACAACCCAAATTCTCC
CTACAAAGTCAAAAAGTCTCCGGATGGGAATCCTTCCCTCTATCTTGGTGAAACGTTTTTAGGGGATGTTGAGTTTCCAC
CTCTTCCCGCTTGGTATCGTCACAGAACAAAAAACGGAAAACTTCCCGGTGAGATTGCACCCGTAATTGAATGGGGATAT
TTGATCTATCTTACTGTTTTTAGAAACTGTCAGTATTTTGGAAAAGAAGAGGAATGTGCATATTGTGATATCAATCATAA
CTATCGCCAACAGAAAAATGCAGGGCGTCCCTACACCGGTATAAAAGATATCGAGGATATCTTGGAAGTTTTATCCTGGA
TCGATGCAGAAGATCAAACCGCGAAGGTTTATACGATTACCGGCGGAAGTGTAATCACATCCTTAAGGAAAAAAAATGAA
ATCGATTTTTATTTGGATTACGCGCGGGCAATTGAATCTAAATTTCCGGGAAGATGGATGGGTAAGATCGTCTCTCAGGC
TTGGGAAATAGAAGATTGTAGGAAATTCAAAAATGCGGGCATTCAGGTTTATCATCCGAATTATGAAGTTTGGGATAAGA
ATTTATTTCAAAAAATCTGTCCCGGTAAAGAAGCCTACATTGGGAGAGACAACTGGATTCGAAGAGTCGTGGATTCCGCG
GAAGTTTTCGGCCCTTCTTGTGTAATTCCAAATTTTGTGGGCGGAGTGGAACTTTCCAAACCGTACGGATTTACAACTGT
TAGGGAAGCAATTGCTTCCACAGAGGAAGGTCTGGATTTCTTTATGTCAAAAGGAATCATGCCACGGTTTACTGCCTGGT
GCCCTGAACCTTATACAACTCTTGGAACACAAGCGGGTCCTCCTTTGGAATATTTCTGTGAGCTCTTGACTGTATGGAAA
GCTACATTCGAAAAATATAATTTACCGGTTCCTCCCGGTTATGGTGAACCAGGTCCGGGTAAAGCTGTTTTTTCCGTTTC
CGCTTTTATGGATGTGATTGGTTATCAGCAAAGAAGCTAA

Upstream 100 bases:

>100_bases
AAGATGATTTCTTTTTTAAATTTCTTCTTAAAATCGGATCCGTTTTCCGAAAAAAACTGCGTGTCATTTCAGTTCCTTTG
GAGACATTGTCTTTATCAAG

Downstream 100 bases:

>100_bases
AACGGCGCTTGCTTTCATTATCATCTATGTACGTACATTTTACTTGTTCTTCTATAACATTTTTTTGATATTGGGTTGAT
CGGAGTCCGTCTCAAATCCT

Product: hypothetical protein

Products: NA

Alternate protein names: Elongator /MiaB/NifB; Fe-S Protein; Radical SAM Domain Protein; Radical SAM Family Protein; Radical SAM Family Fe-S Protein

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MEATDSIRQNSTIPLLEEMERKYKFIPMEAIVKQDILRQGIHFLKEAFDVTGKYKTKDYFIFSFDHIPFSELGEGTDVKA
PEEIKVSNGHFSLLPTVISTRNNPNSPYKVKKSPDGNPSLYLGETFLGDVEFPPLPAWYRHRTKNGKLPGEIAPVIEWGY
LIYLTVFRNCQYFGKEEECAYCDINHNYRQQKNAGRPYTGIKDIEDILEVLSWIDAEDQTAKVYTITGGSVITSLRKKNE
IDFYLDYARAIESKFPGRWMGKIVSQAWEIEDCRKFKNAGIQVYHPNYEVWDKNLFQKICPGKEAYIGRDNWIRRVVDSA
EVFGPSCVIPNFVGGVELSKPYGFTTVREAIASTEEGLDFFMSKGIMPRFTAWCPEPYTTLGTQAGPPLEYFCELLTVWK
ATFEKYNLPVPPGYGEPGPGKAVFSVSAFMDVIGYQQRS

Sequences:

>Translated_439_residues
MEATDSIRQNSTIPLLEEMERKYKFIPMEAIVKQDILRQGIHFLKEAFDVTGKYKTKDYFIFSFDHIPFSELGEGTDVKA
PEEIKVSNGHFSLLPTVISTRNNPNSPYKVKKSPDGNPSLYLGETFLGDVEFPPLPAWYRHRTKNGKLPGEIAPVIEWGY
LIYLTVFRNCQYFGKEEECAYCDINHNYRQQKNAGRPYTGIKDIEDILEVLSWIDAEDQTAKVYTITGGSVITSLRKKNE
IDFYLDYARAIESKFPGRWMGKIVSQAWEIEDCRKFKNAGIQVYHPNYEVWDKNLFQKICPGKEAYIGRDNWIRRVVDSA
EVFGPSCVIPNFVGGVELSKPYGFTTVREAIASTEEGLDFFMSKGIMPRFTAWCPEPYTTLGTQAGPPLEYFCELLTVWK
ATFEKYNLPVPPGYGEPGPGKAVFSVSAFMDVIGYQQRS
>Mature_439_residues
MEATDSIRQNSTIPLLEEMERKYKFIPMEAIVKQDILRQGIHFLKEAFDVTGKYKTKDYFIFSFDHIPFSELGEGTDVKA
PEEIKVSNGHFSLLPTVISTRNNPNSPYKVKKSPDGNPSLYLGETFLGDVEFPPLPAWYRHRTKNGKLPGEIAPVIEWGY
LIYLTVFRNCQYFGKEEECAYCDINHNYRQQKNAGRPYTGIKDIEDILEVLSWIDAEDQTAKVYTITGGSVITSLRKKNE
IDFYLDYARAIESKFPGRWMGKIVSQAWEIEDCRKFKNAGIQVYHPNYEVWDKNLFQKICPGKEAYIGRDNWIRRVVDSA
EVFGPSCVIPNFVGGVELSKPYGFTTVREAIASTEEGLDFFMSKGIMPRFTAWCPEPYTTLGTQAGPPLEYFCELLTVWK
ATFEKYNLPVPPGYGEPGPGKAVFSVSAFMDVIGYQQRS

Specific function: Unknown

COG id: COG2516

COG function: function code R; Biotin synthase-related enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50111; Mature: 50111

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEATDSIRQNSTIPLLEEMERKYKFIPMEAIVKQDILRQGIHFLKEAFDVTGKYKTKDYF
CCCCHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCEEE
IFSFDHIPFSELGEGTDVKAPEEIKVSNGHFSLLPTVISTRNNPNSPYKVKKSPDGNPSL
EEEECCCCHHHCCCCCCCCCCCCEEECCCCEEEHHHHHHCCCCCCCCEEEECCCCCCCCE
YLGETFLGDVEFPPLPAWYRHRTKNGKLPGEIAPVIEWGYLIYLTVFRNCQYFGKEEECA
EECHHHCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
YCDINHNYRQQKNAGRPYTGIKDIEDILEVLSWIDAEDQTAKVYTITGGSVITSLRKKNE
EEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHCCC
IDFYLDYARAIESKFPGRWMGKIVSQAWEIEDCRKFKNAGIQVYHPNYEVWDKNLFQKIC
CHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHCCEEEECCCHHHHHHHHHHHHC
PGKEAYIGRDNWIRRVVDSAEVFGPSCVIPNFVGGVELSKPYGFTTVREAIASTEEGLDF
CCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHH
FMSKGIMPRFTAWCPEPYTTLGTQAGPPLEYFCELLTVWKATFEKYNLPVPPGYGEPGPG
HHHCCCCCHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
KAVFSVSAFMDVIGYQQRS
CHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEATDSIRQNSTIPLLEEMERKYKFIPMEAIVKQDILRQGIHFLKEAFDVTGKYKTKDYF
CCCCHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCEEE
IFSFDHIPFSELGEGTDVKAPEEIKVSNGHFSLLPTVISTRNNPNSPYKVKKSPDGNPSL
EEEECCCCHHHCCCCCCCCCCCCEEECCCCEEEHHHHHHCCCCCCCCEEEECCCCCCCCE
YLGETFLGDVEFPPLPAWYRHRTKNGKLPGEIAPVIEWGYLIYLTVFRNCQYFGKEEECA
EECHHHCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
YCDINHNYRQQKNAGRPYTGIKDIEDILEVLSWIDAEDQTAKVYTITGGSVITSLRKKNE
EEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHCCC
IDFYLDYARAIESKFPGRWMGKIVSQAWEIEDCRKFKNAGIQVYHPNYEVWDKNLFQKIC
CHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHCCEEEECCCHHHHHHHHHHHHC
PGKEAYIGRDNWIRRVVDSAEVFGPSCVIPNFVGGVELSKPYGFTTVREAIASTEEGLDF
CCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHH
FMSKGIMPRFTAWCPEPYTTLGTQAGPPLEYFCELLTVWKATFEKYNLPVPPGYGEPGPG
HHHCCCCCHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
KAVFSVSAFMDVIGYQQRS
CHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA