| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116328219
Identifier: 116328219
GI number: 116328219
Start: 1805214
End: 1805897
Strand: Direct
Name: 116328219
Synonym: LBL_1543
Alternate gene names: NA
Gene position: 1805214-1805897 (Clockwise)
Preceding gene: 116328218
Following gene: 116328221
Centisome position: 49.94
GC content: 42.54
Gene sequence:
>684_bases ATGAAATATGAAATATTATTAAAACCTGATTTTCCAATCGTTCAAGTTCAATTAGAAGATGGAGAATCCATCCGAGCCGA ATCCGGTGCAATGGTAGCGATGAGTCCAACGATAAAGATGGTTACAAAAGCAGAGGGTGGAATTTGGGCTTCTGCAAAAC GCGCTCTCTTGAGTGGGGAATCTTTTTTCCAAAACACGTTCAAAGCGGAAAATGGAAAAGGAATGATTTTCCTAACGAGC GCTACTCAAGGCGATATAGAACACCGTAAGATGAACGGAGAGGATCTGATTCTTAGTCGAGGAGCTTATGTTGCCGGTTC CGAATCCCTTTTGATCGACAGCAAATGGGGAGGATTCAAAGGTTTTTTTTCGGGCGAAGGTCTGTTCTTCTTAAAGGTAA GCGGAATTGGAGATCTTTTCTTCTCGAGTTTTGGTGCGATTCATACAATCGACGTGAACGGTCAGTATATCGTGGATACA GGTCATATAGTTGGTTTTGAAGGATCATTGAATTATACGATTCAAAAGGTAGGAGGGCTTAAATCCCTTTTCCTCAGTGG AGAAGGTTTGGTGGCGGTGTTTTCCGGCACCGGGAAATTATATATTCAATCCAGAAATCAAAATTCGTTCGCGGCATGGG CCAATCAGTGGAGAAGGGTGGAAAAATCCTCTTCTTCAAGTTGA
Upstream 100 bases:
>100_bases GAAAGGTTTGGATTCAATCCAGAAACGTTCCTTCTTTGGGTAGTTGGTTCAGAGACCAATTACCTCCGATCAAAAGATAA GGAAGAATGAATCGTGAAAC
Downstream 100 bases:
>100_bases ACTAAACGTGAATTCGATATAGAAAACTTGTTTAATCTACAGGAATTCCTTCGTTTTGGGAAAAGTTCACGATGATACTT CAATTTATGTGGAGATTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MKYEILLKPDFPIVQVQLEDGESIRAESGAMVAMSPTIKMVTKAEGGIWASAKRALLSGESFFQNTFKAENGKGMIFLTS ATQGDIEHRKMNGEDLILSRGAYVAGSESLLIDSKWGGFKGFFSGEGLFFLKVSGIGDLFFSSFGAIHTIDVNGQYIVDT GHIVGFEGSLNYTIQKVGGLKSLFLSGEGLVAVFSGTGKLYIQSRNQNSFAAWANQWRRVEKSSSSS
Sequences:
>Translated_227_residues MKYEILLKPDFPIVQVQLEDGESIRAESGAMVAMSPTIKMVTKAEGGIWASAKRALLSGESFFQNTFKAENGKGMIFLTS ATQGDIEHRKMNGEDLILSRGAYVAGSESLLIDSKWGGFKGFFSGEGLFFLKVSGIGDLFFSSFGAIHTIDVNGQYIVDT GHIVGFEGSLNYTIQKVGGLKSLFLSGEGLVAVFSGTGKLYIQSRNQNSFAAWANQWRRVEKSSSSS >Mature_227_residues MKYEILLKPDFPIVQVQLEDGESIRAESGAMVAMSPTIKMVTKAEGGIWASAKRALLSGESFFQNTFKAENGKGMIFLTS ATQGDIEHRKMNGEDLILSRGAYVAGSESLLIDSKWGGFKGFFSGEGLFFLKVSGIGDLFFSSFGAIHTIDVNGQYIVDT GHIVGFEGSLNYTIQKVGGLKSLFLSGEGLVAVFSGTGKLYIQSRNQNSFAAWANQWRRVEKSSSSS
Specific function: Unknown
COG id: COG2013
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002838 - InterPro: IPR016031 [H]
Pfam domain/function: PF01987 DUF124 [H]
EC number: NA
Molecular weight: Translated: 24596; Mature: 24596
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYEILLKPDFPIVQVQLEDGESIRAESGAMVAMSPTIKMVTKAEGGIWASAKRALLSGE CCEEEEECCCCCEEEEEECCCCEEECCCCCEEEECCCEEEEEECCCCEEHHHHHHHHCCC SFFQNTFKAENGKGMIFLTSATQGDIEHRKMNGEDLILSRGAYVAGSESLLIDSKWGGFK HHHHHHHCCCCCCEEEEEEECCCCCCHHHCCCCCEEEEECCCEEECCCEEEEECCCCCCC GFFSGEGLFFLKVSGIGDLFFSSFGAIHTIDVNGQYIVDTGHIVGFEGSLNYTIQKVGGL EEECCCCEEEEEECCCCHHHHHCCCCEEEEECCCEEEEECCEEEEECCCCCEEEEECCCE KSLFLSGEGLVAVFSGTGKLYIQSRNQNSFAAWANQWRRVEKSSSSS EEEEECCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKYEILLKPDFPIVQVQLEDGESIRAESGAMVAMSPTIKMVTKAEGGIWASAKRALLSGE CCEEEEECCCCCEEEEEECCCCEEECCCCCEEEECCCEEEEEECCCCEEHHHHHHHHCCC SFFQNTFKAENGKGMIFLTSATQGDIEHRKMNGEDLILSRGAYVAGSESLLIDSKWGGFK HHHHHHHCCCCCCEEEEEEECCCCCCHHHCCCCCEEEEECCCEEECCCEEEEECCCCCCC GFFSGEGLFFLKVSGIGDLFFSSFGAIHTIDVNGQYIVDTGHIVGFEGSLNYTIQKVGGL EEECCCCEEEEEECCCCHHHHHCCCCEEEEECCCEEEEECCEEEEECCCCCEEEEECCCE KSLFLSGEGLVAVFSGTGKLYIQSRNQNSFAAWANQWRRVEKSSSSS EEEEECCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA