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The map label for this gene is yliI [C]

Identifier: 116328186

GI number: 116328186

Start: 1768132

End: 1769502

Strand: Direct

Name: yliI [C]

Synonym: LBL_1510

Alternate gene names: 116328186

Gene position: 1768132-1769502 (Clockwise)

Preceding gene: 116328185

Following gene: 116328188

Centisome position: 48.92

GC content: 39.68

Gene sequence:

>1371_bases
ATGTTTTGTACAATCGAATTCGGCTCGTTCTGTTTCATTAAAATAAAATCAAATATCGTTCAGAATCCGTTTTCAAAATT
GATTTTAAGCTTTTTGAGATCTAAGAACGTTTTCCAGTGGATTCGAAAAATTTCCATTTATATTCTTGTTTCGGGTGCCC
TGTTTTTGACGAACGGTTGCGAGCAGATTCAAAATATTCTCGTGGAAATTTTAGGAGCGTCTGACAAGTATAAGGCGGAA
GGAAATGCGAATTTTCTTCAGCCCATTTATTCCGGAAAAGACGAGACTAAGGAAAAAATTTCTATTTCTCTCAAAGAAAT
ATCTGCGGGTTTCAGGCAACCTACGGATATACAGTTTCCGCCGGGAGAAACGGAATTTTTTTTGGTTACCGAACAAAAGG
GGAAACTTCGTTGGGGTAAGGTTCGCAAAAATGAAACCGGAATATTATTGATTTTGAATGTTCTTTCTGAATCGGAGCAA
GGTTTGCTTGGCCTTGCGTTTCATCCCGATTTTGCAAAGAATGGGAAATTCTATCTTAATTACGTCCTAAAAGTAAACGG
AAAAGATACGAGTCGAGTCAGCGAATGGGTCGCGTCTTCCCCAAAAGATTTAGCGAATTCTAAAATTACTTCCGAACGGA
TTATTATGGAAGTGATTCAACCTTACCCGAATCACAACGCGGGACAACTTGCGTTTGGTCCGGATCAGTATCTCTACGTA
GGTTGGGGAGATGGAGGTTGGATGGGCGACCCAAAGAAAAATGGACAAAATCCTAAAACGTTTTTAGGAAGTATGCTCCG
TATAGATGTAAACTCAACGGAAAATGGAAAGGGTTATAAGGTTCCTCAGGATAATCCTTTTGTAAAAGATTCCTGCTGTG
TTCCAGAGACATTCGCATACGGTTTTCGAAATCCTTGGAGGTATAGTTTTGATCCTAAGGGAAGGCTGATTGTTGCGGAT
GTGGGGCAAGATCTTTGGGAAGAAATCAATATAGTAGAGCGTGGGAAAAATTACGGATGGAACATTAGAGAAGCGAATCA
TTGTTTCGATCCGAAGCAGAATTGCAGAACAGAGGGCCTAACCGACCCGATTTACGAGTACGGTCGTGAAGAAGGACAAT
CGATCACAGGTGGCTATGTATATTCGAATTCAGAAATTTCAGATTTGAATGGAAAATACATTTTTGCGGACTTTGTTTCA
GGTAGAATTTGGGCATTGGAACTTCCAGAACAATTGGGCCAACCTGCAAAAAAAGTTTATACACTTGGAAAATGGCCGTT
ACTTATTTCTTCCTTTGGAAAAGATTCAACCGGAAAAGTATATTTAAGCGATTTTGGGAGTGGAAAAATCTATCGAATCG
ATCCAAAGTAA

Upstream 100 bases:

>100_bases
CTCCAAATCGTTTCTTTTAGATTTTGATTTCTTCGCCGTTCACGTAAAAAGTTTCCAATTTGATTTGACTCGTCTTCGAG
AAATAGAATTCTGTGACGCT

Downstream 100 bases:

>100_bases
AAATTTTGATTTTATTATGAAGAACCGGTCTTAAAACCTAACCCCCACGAGCTGTAGGAACTCTTACAAATTCAAATCAC
GGCAAAAACTACAAATAGTC

Product: dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 456; Mature: 456

Protein sequence:

>456_residues
MFCTIEFGSFCFIKIKSNIVQNPFSKLILSFLRSKNVFQWIRKISIYILVSGALFLTNGCEQIQNILVEILGASDKYKAE
GNANFLQPIYSGKDETKEKISISLKEISAGFRQPTDIQFPPGETEFFLVTEQKGKLRWGKVRKNETGILLILNVLSESEQ
GLLGLAFHPDFAKNGKFYLNYVLKVNGKDTSRVSEWVASSPKDLANSKITSERIIMEVIQPYPNHNAGQLAFGPDQYLYV
GWGDGGWMGDPKKNGQNPKTFLGSMLRIDVNSTENGKGYKVPQDNPFVKDSCCVPETFAYGFRNPWRYSFDPKGRLIVAD
VGQDLWEEINIVERGKNYGWNIREANHCFDPKQNCRTEGLTDPIYEYGREEGQSITGGYVYSNSEISDLNGKYIFADFVS
GRIWALELPEQLGQPAKKVYTLGKWPLLISSFGKDSTGKVYLSDFGSGKIYRIDPK

Sequences:

>Translated_456_residues
MFCTIEFGSFCFIKIKSNIVQNPFSKLILSFLRSKNVFQWIRKISIYILVSGALFLTNGCEQIQNILVEILGASDKYKAE
GNANFLQPIYSGKDETKEKISISLKEISAGFRQPTDIQFPPGETEFFLVTEQKGKLRWGKVRKNETGILLILNVLSESEQ
GLLGLAFHPDFAKNGKFYLNYVLKVNGKDTSRVSEWVASSPKDLANSKITSERIIMEVIQPYPNHNAGQLAFGPDQYLYV
GWGDGGWMGDPKKNGQNPKTFLGSMLRIDVNSTENGKGYKVPQDNPFVKDSCCVPETFAYGFRNPWRYSFDPKGRLIVAD
VGQDLWEEINIVERGKNYGWNIREANHCFDPKQNCRTEGLTDPIYEYGREEGQSITGGYVYSNSEISDLNGKYIFADFVS
GRIWALELPEQLGQPAKKVYTLGKWPLLISSFGKDSTGKVYLSDFGSGKIYRIDPK
>Mature_456_residues
MFCTIEFGSFCFIKIKSNIVQNPFSKLILSFLRSKNVFQWIRKISIYILVSGALFLTNGCEQIQNILVEILGASDKYKAE
GNANFLQPIYSGKDETKEKISISLKEISAGFRQPTDIQFPPGETEFFLVTEQKGKLRWGKVRKNETGILLILNVLSESEQ
GLLGLAFHPDFAKNGKFYLNYVLKVNGKDTSRVSEWVASSPKDLANSKITSERIIMEVIQPYPNHNAGQLAFGPDQYLYV
GWGDGGWMGDPKKNGQNPKTFLGSMLRIDVNSTENGKGYKVPQDNPFVKDSCCVPETFAYGFRNPWRYSFDPKGRLIVAD
VGQDLWEEINIVERGKNYGWNIREANHCFDPKQNCRTEGLTDPIYEYGREEGQSITGGYVYSNSEISDLNGKYIFADFVS
GRIWALELPEQLGQPAKKVYTLGKWPLLISSFGKDSTGKVYLSDFGSGKIYRIDPK

Specific function: Unknown

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PQQ oxidoreductase gdhB family [H]

Homologues:

Organism=Homo sapiens, GI187936953, Length=399, Percent_Identity=39.0977443609023, Blast_Score=249, Evalue=3e-66,
Organism=Homo sapiens, GI187936955, Length=399, Percent_Identity=39.0977443609023, Blast_Score=249, Evalue=3e-66,
Organism=Homo sapiens, GI124248546, Length=378, Percent_Identity=39.4179894179894, Blast_Score=238, Evalue=6e-63,
Organism=Homo sapiens, GI20143973, Length=394, Percent_Identity=26.1421319796954, Blast_Score=116, Evalue=4e-26,
Organism=Escherichia coli, GI1787060, Length=247, Percent_Identity=27.9352226720648, Blast_Score=83, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 51479; Mature: 51479

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFCTIEFGSFCFIKIKSNIVQNPFSKLILSFLRSKNVFQWIRKISIYILVSGALFLTNGC
CEEEEEECCEEEEEEECHHHCCHHHHHHHHHHHCCCHHHHHHHHEEEEEEECHHEECCCH
EQIQNILVEILGASDKYKAEGNANFLQPIYSGKDETKEKISISLKEISAGFRQPTDIQFP
HHHHHHHHHHHCCCCCEECCCCCCHHHHHHCCCCCCCHHHEEEHHHHHCCCCCCCCCCCC
PGETEFFLVTEQKGKLRWGKVRKNETGILLILNVLSESEQGLLGLAFHPDFAKNGKFYLN
CCCCEEEEEECCCCCEEECCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCEEEE
YVLKVNGKDTSRVSEWVASSPKDLANSKITSERIIMEVIQPYPNHNAGQLAFGPDQYLYV
EEEEECCCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEE
GWGDGGWMGDPKKNGQNPKTFLGSMLRIDVNSTENGKGYKVPQDNPFVKDSCCVPETFAY
EECCCCCCCCCCCCCCCHHHHHCCEEEEEECCCCCCCCEECCCCCCCCCCCCCCCHHHHH
GFRNPWRYSFDPKGRLIVADVGQDLWEEINIVERGKNYGWNIREANHCFDPKQNCRTEGL
CCCCCCCCCCCCCCCEEEECCCHHHHHHCCHHHCCCCCCCCCCCCCCCCCCHHHCCCCCC
TDPIYEYGREEGQSITGGYVYSNSEISDLNGKYIFADFVSGRIWALELPEQLGQPAKKVY
CCHHHHHHHHCCCEEECCEEEECCCCCCCCCCEEEEEECCCCEEEEECHHHHCCCHHHHE
TLGKWPLLISSFGKDSTGKVYLSDFGSGKIYRIDPK
ECCCCHHHHHHCCCCCCCEEEEEECCCCEEEEECCC
>Mature Secondary Structure
MFCTIEFGSFCFIKIKSNIVQNPFSKLILSFLRSKNVFQWIRKISIYILVSGALFLTNGC
CEEEEEECCEEEEEEECHHHCCHHHHHHHHHHHCCCHHHHHHHHEEEEEEECHHEECCCH
EQIQNILVEILGASDKYKAEGNANFLQPIYSGKDETKEKISISLKEISAGFRQPTDIQFP
HHHHHHHHHHHCCCCCEECCCCCCHHHHHHCCCCCCCHHHEEEHHHHHCCCCCCCCCCCC
PGETEFFLVTEQKGKLRWGKVRKNETGILLILNVLSESEQGLLGLAFHPDFAKNGKFYLN
CCCCEEEEEECCCCCEEECCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCEEEE
YVLKVNGKDTSRVSEWVASSPKDLANSKITSERIIMEVIQPYPNHNAGQLAFGPDQYLYV
EEEEECCCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEE
GWGDGGWMGDPKKNGQNPKTFLGSMLRIDVNSTENGKGYKVPQDNPFVKDSCCVPETFAY
EECCCCCCCCCCCCCCCHHHHHCCEEEEEECCCCCCCCEECCCCCCCCCCCCCCCHHHHH
GFRNPWRYSFDPKGRLIVADVGQDLWEEINIVERGKNYGWNIREANHCFDPKQNCRTEGL
CCCCCCCCCCCCCCCEEEECCCHHHHHHCCHHHCCCCCCCCCCCCCCCCCCHHHCCCCCC
TDPIYEYGREEGQSITGGYVYSNSEISDLNGKYIFADFVSGRIWALELPEQLGQPAKKVY
CCHHHHHHHHCCCEEECCEEEECCCCCCCCCCEEEEEECCCCEEEEECHHHHCCCHHHHE
TLGKWPLLISSFGKDSTGKVYLSDFGSGKIYRIDPK
ECCCCHHHHHHCCCCCCCEEEEEECCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]