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The map label for this gene is aspC [H]

Identifier: 116328127

GI number: 116328127

Start: 1659258

End: 1660373

Strand: Direct

Name: aspC [H]

Synonym: LBL_1425

Alternate gene names: 116328127

Gene position: 1659258-1660373 (Clockwise)

Preceding gene: 116328126

Following gene: 116328129

Centisome position: 45.91

GC content: 40.23

Gene sequence:

>1116_bases
ATGGAACCTCGGGAATTTTGGATCGAAGAAAGACTTGAAAGATATAGAAAAATTTCTCCGTGCAATCTAGGCGAAAGTGG
AATTCGAAATATCACACTTGGTGAATTGTTTTCTAGTTTGGATCTTTCCGCCGAGGTTTTGAATTCTATTTCTTTAGAGG
ACTCTCCCAATCGAGGCGATCTCGTCTTAAGAGAAGAAATTGCAAAACTTTATCCAGGTTTGGACGCGGATCAAATTTTA
GTTACGACCGGAACCGGAGAAGCGCTTTATATTTTGTTTCATATTCTTTGTCAAAAAGATTCCGTCGTTTCTTATTTTTC
TCCCGCCTTTCAAGCGTTATACGAAATACCTAAGATGATAGGCGCTCGGTTGGAAGCGGTTTCTTTACTGGAGGATTTAG
ATAAAAATTTAAAATCCTCATTATCGGTGAATTTGATCCGTGAATTGTTCCAAAGAGGAAAGGATTTAGTAGTTTTCAAT
CATCCACACAATCCGAGTGGTTTGTCTCTGGATAAAAGTTCAATTGAAACGATCCGACAAGCGGCACATTTACATAAAGG
TTGGATTTTTTTTGATGAACACTACCGCTTCTTGGACTTTCAGAACGATCTCAGTTGGACCGGCGCAGGACTTACGGAGC
ATACGGTGAGTACCGGTTCGATCACGAAATGTTTTGGAGTGATGGGACTTAGAATTGGATGGATGACAGGGCCGAAAGAG
ATAATTGAAAGGGCCAGGTCGTTCAAGGATTACTTAACACATACGGTTTCTCCGATTTCCGAATTTTTGACTCTTCGAAT
TCTGCAAAATCGAGAGTGTTTAATAGCCCCGATCAAAATATCTATTTTAAAGAATATTCAATTTTTTGAAAGTGCTTGGA
AAGAACTTCCCGGTTTGGAAAATTTTATAAAACCCGGGGGAGGAGTCGTTTCTTTTGTTAAACTAAAAGAAGGAGTCGAT
TCTTTTCGTTATGCAGATCTTTTGTTGGATCGATGCGGGGTTTTTGTACTTCCGGGGCGGGATTTTGAGTGTGAAGGTTG
GATCCGAATCGGCTTCGGAGAAACTCCCGAACGATTTCAAGCCGGAATAAAAAGGTGGGAGAATTTAAACTTGTGA

Upstream 100 bases:

>100_bases
GTCTTCGTAGTTTGCGAATTCATTTTTGGGTTCAGATTTCCTTTGGATTTTTTGCAATTCTATTTCTCTTAGGAGGGGCG
ATTCTTACTCTTGTCTCTTG

Downstream 100 bases:

>100_bases
CGAATGGCTATATTCATTATTTTGGCGGCAGAAAGATCTAAAAATAACGTGAGTTAACAAATGCGAAAGCAATTATTATG
TTGCGATCCACGGCGAGCAG

Product: aspartate/tyrosine/aromatic aminotransferase

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MEPREFWIEERLERYRKISPCNLGESGIRNITLGELFSSLDLSAEVLNSISLEDSPNRGDLVLREEIAKLYPGLDADQIL
VTTGTGEALYILFHILCQKDSVVSYFSPAFQALYEIPKMIGARLEAVSLLEDLDKNLKSSLSVNLIRELFQRGKDLVVFN
HPHNPSGLSLDKSSIETIRQAAHLHKGWIFFDEHYRFLDFQNDLSWTGAGLTEHTVSTGSITKCFGVMGLRIGWMTGPKE
IIERARSFKDYLTHTVSPISEFLTLRILQNRECLIAPIKISILKNIQFFESAWKELPGLENFIKPGGGVVSFVKLKEGVD
SFRYADLLLDRCGVFVLPGRDFECEGWIRIGFGETPERFQAGIKRWENLNL

Sequences:

>Translated_371_residues
MEPREFWIEERLERYRKISPCNLGESGIRNITLGELFSSLDLSAEVLNSISLEDSPNRGDLVLREEIAKLYPGLDADQIL
VTTGTGEALYILFHILCQKDSVVSYFSPAFQALYEIPKMIGARLEAVSLLEDLDKNLKSSLSVNLIRELFQRGKDLVVFN
HPHNPSGLSLDKSSIETIRQAAHLHKGWIFFDEHYRFLDFQNDLSWTGAGLTEHTVSTGSITKCFGVMGLRIGWMTGPKE
IIERARSFKDYLTHTVSPISEFLTLRILQNRECLIAPIKISILKNIQFFESAWKELPGLENFIKPGGGVVSFVKLKEGVD
SFRYADLLLDRCGVFVLPGRDFECEGWIRIGFGETPERFQAGIKRWENLNL
>Mature_371_residues
MEPREFWIEERLERYRKISPCNLGESGIRNITLGELFSSLDLSAEVLNSISLEDSPNRGDLVLREEIAKLYPGLDADQIL
VTTGTGEALYILFHILCQKDSVVSYFSPAFQALYEIPKMIGARLEAVSLLEDLDKNLKSSLSVNLIRELFQRGKDLVVFN
HPHNPSGLSLDKSSIETIRQAAHLHKGWIFFDEHYRFLDFQNDLSWTGAGLTEHTVSTGSITKCFGVMGLRIGWMTGPKE
IIERARSFKDYLTHTVSPISEFLTLRILQNRECLIAPIKISILKNIQFFESAWKELPGLENFIKPGGGVVSFVKLKEGVD
SFRYADLLLDRCGVFVLPGRDFECEGWIRIGFGETPERFQAGIKRWENLNL

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Escherichia coli, GI1786816, Length=213, Percent_Identity=27.2300469483568, Blast_Score=66, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71994472, Length=210, Percent_Identity=26.6666666666667, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI71994476, Length=210, Percent_Identity=26.6666666666667, Blast_Score=75, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17567369, Length=202, Percent_Identity=25.2475247524752, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28573069, Length=327, Percent_Identity=26.605504587156, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24646114, Length=327, Percent_Identity=26.605504587156, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI28573067, Length=327, Percent_Identity=26.605504587156, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI28573065, Length=327, Percent_Identity=26.605504587156, Blast_Score=75, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 42136; Mature: 42136

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPREFWIEERLERYRKISPCNLGESGIRNITLGELFSSLDLSAEVLNSISLEDSPNRGD
CCCHHHHHHHHHHHHHCCCCCCCCCHHCCCCCHHHHHHHHCHHHHHHHHCCCCCCCCCCC
LVLREEIAKLYPGLDADQILVTTGTGEALYILFHILCQKDSVVSYFSPAFQALYEIPKMI
CHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
GARLEAVSLLEDLDKNLKSSLSVNLIRELFQRGKDLVVFNHPHNPSGLSLDKSSIETIRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHH
AAHLHKGWIFFDEHYRFLDFQNDLSWTGAGLTEHTVSTGSITKCFGVMGLRIGWMTGPKE
HHHHHCCEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCHHH
IIERARSFKDYLTHTVSPISEFLTLRILQNRECLIAPIKISILKNIQFFESAWKELPGLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCH
NFIKPGGGVVSFVKLKEGVDSFRYADLLLDRCGVFVLPGRDFECEGWIRIGFGETPERFQ
HHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCEEEECCCCCHHHHH
AGIKRWENLNL
HHHHHHHCCCC
>Mature Secondary Structure
MEPREFWIEERLERYRKISPCNLGESGIRNITLGELFSSLDLSAEVLNSISLEDSPNRGD
CCCHHHHHHHHHHHHHCCCCCCCCCHHCCCCCHHHHHHHHCHHHHHHHHCCCCCCCCCCC
LVLREEIAKLYPGLDADQILVTTGTGEALYILFHILCQKDSVVSYFSPAFQALYEIPKMI
CHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
GARLEAVSLLEDLDKNLKSSLSVNLIRELFQRGKDLVVFNHPHNPSGLSLDKSSIETIRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHH
AAHLHKGWIFFDEHYRFLDFQNDLSWTGAGLTEHTVSTGSITKCFGVMGLRIGWMTGPKE
HHHHHCCEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCHHH
IIERARSFKDYLTHTVSPISEFLTLRILQNRECLIAPIKISILKNIQFFESAWKELPGLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCH
NFIKPGGGVVSFVKLKEGVDSFRYADLLLDRCGVFVLPGRDFECEGWIRIGFGETPERFQ
HHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCEEEECCCCCHHHHH
AGIKRWENLNL
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]