| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116328067
Identifier: 116328067
GI number: 116328067
Start: 1594834
End: 1595274
Strand: Reverse
Name: 116328067
Synonym: LBL_1362
Alternate gene names: NA
Gene position: 1595274-1594834 (Counterclockwise)
Preceding gene: 116328068
Following gene: 116328065
Centisome position: 44.14
GC content: 37.64
Gene sequence:
>441_bases ATGAAACAAAAAAGAATCTATTTTTATCAATTGGACGGAAGAGGAAAACTTTACCATGATTTTTCGGAGCTGAAAGACCC GGAATTTTTGGATTTTTTCATTTCAAGAATTCGTAAGAACGACACCGGAGAACATCCCGAGTTTCCTTATCTTGCAGTCT GTAATGGAGAATGGAATTTCATTCAACCTACGACTACGATTTTTATCTTTCGCAAATTAGAAAACGAGAAACTATTTTAC TCTCCCGGGTTGACCGTTCCCTTTCAGCCTGAAAATCTAACAACCTTTCGAGAGTCCCTAGCTCATCCGGCACCTCTTGG AGAACTGGGTTCTTTTTCTAGCGAACTTCTTTTGGATTTTTCTAAGAACGTTTTTCAAAGAGAAAATCAACTCATCTTTG AATACCTTGGAAAGGAATTCCTGATTTCGAAAGAGAAGTAA
Upstream 100 bases:
>100_bases CAGTGTCAATAGAAAAGTCTTTACAACGCGCCTTGGAACTTAGTTTTACTTTATCAAATAGATCGGTTGCAAGTTTGTGT CCCGATCGGGGCAAATTCTT
Downstream 100 bases:
>100_bases AGGTCCATTCTAAAACCTCCGCCTTACGTCTGAAACGGGATACTCAATCTGACTTTTTAGAAAAAGTCTGAATTATCGAT TATGGTAACCAAAATCTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MKQKRIYFYQLDGRGKLYHDFSELKDPEFLDFFISRIRKNDTGEHPEFPYLAVCNGEWNFIQPTTTIFIFRKLENEKLFY SPGLTVPFQPENLTTFRESLAHPAPLGELGSFSSELLLDFSKNVFQRENQLIFEYLGKEFLISKEK
Sequences:
>Translated_146_residues MKQKRIYFYQLDGRGKLYHDFSELKDPEFLDFFISRIRKNDTGEHPEFPYLAVCNGEWNFIQPTTTIFIFRKLENEKLFY SPGLTVPFQPENLTTFRESLAHPAPLGELGSFSSELLLDFSKNVFQRENQLIFEYLGKEFLISKEK >Mature_146_residues MKQKRIYFYQLDGRGKLYHDFSELKDPEFLDFFISRIRKNDTGEHPEFPYLAVCNGEWNFIQPTTTIFIFRKLENEKLFY SPGLTVPFQPENLTTFRESLAHPAPLGELGSFSSELLLDFSKNVFQRENQLIFEYLGKEFLISKEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17304; Mature: 17304
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQKRIYFYQLDGRGKLYHDFSELKDPEFLDFFISRIRKNDTGEHPEFPYLAVCNGEWNF CCCCEEEEEEECCCCCEEECHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCE IQPTTTIFIFRKLENEKLFYSPGLTVPFQPENLTTFRESLAHPAPLGELGSFSSELLLDF ECCCEEEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHH SKNVFQRENQLIFEYLGKEFLISKEK HHHHHHHHHHHHHHHCCHHHEEECCC >Mature Secondary Structure MKQKRIYFYQLDGRGKLYHDFSELKDPEFLDFFISRIRKNDTGEHPEFPYLAVCNGEWNF CCCCEEEEEEECCCCCEEECHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCE IQPTTTIFIFRKLENEKLFYSPGLTVPFQPENLTTFRESLAHPAPLGELGSFSSELLLDF ECCCEEEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHH SKNVFQRENQLIFEYLGKEFLISKEK HHHHHHHHHHHHHHHCCHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA