| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116328059
Identifier: 116328059
GI number: 116328059
Start: 1587272
End: 1587901
Strand: Direct
Name: 116328059
Synonym: LBL_1354
Alternate gene names: NA
Gene position: 1587272-1587901 (Clockwise)
Preceding gene: 116328058
Following gene: 116328060
Centisome position: 43.91
GC content: 41.27
Gene sequence:
>630_bases ATGACATTTACACCGGATAAAATCCAGGCAAAGAATTATCTTACAGTGATTCAAGAACTGGCGAATTATTCTTCCACCAG CGACACGAGTCGTATTTTAGAGCGATTGTCCGTACTCCAGGTGCATGATCAGGATTCGAGAACCGCGGTCTTGGAAGCGA GCGAAGGGAAAAATCTTCCGGATCGTTTAGTCGAAATCATAAAACTTTTTCGGATTATCCATTCCAAACGTCAGGAAATA CATTCTTTTTACGAAACCGCGATTTCAAAATACGGAACGATCAACACTTTAACCGCAAAAAGAAAACCTACGGACGACGA GGCGCGCATCAAACAGATTCTCACGGATTATATTCTAAAAATTGAATCTTTTTTCGAAAAAAACGACATAGGAGACGAAG CGCTCATTAAGGAAATCAATCGGTTCTTAAATGAACTCGAATCTCTGAATTTATTAAACGAGGACAATCTTACGGCATTG ATCCTTTCTTCAAAGGCGGTTTCTCTCATACAACCTCCGATGGAAAAGTTGGCCTCTTGTTACCAAGACTACGATAAAAT AGAGGTTATTCTCAAACGACTCGTCCGAATCGCAGAGATGATCATAGAGGATGCCAAGGTTCCGCGCTGA
Upstream 100 bases:
>100_bases GCGCGGATGTTGTGGACAAAATCGTAAAGATGGGAAACTCCAAAACTTCGATCAAAAAAGTTCTCATATTAGATAAGAGA ACGGCGGCTACGGCGGTGCA
Downstream 100 bases:
>100_bases TCTAAAAGTCCTTATTTTTTTGCTGGTTTTGAGGGAATTTGCCGAAAATAAATTAGAATGATTCGGATTTTTCTCGCAAT TTTACTGACCCCTTCGTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MTFTPDKIQAKNYLTVIQELANYSSTSDTSRILERLSVLQVHDQDSRTAVLEASEGKNLPDRLVEIIKLFRIIHSKRQEI HSFYETAISKYGTINTLTAKRKPTDDEARIKQILTDYILKIESFFEKNDIGDEALIKEINRFLNELESLNLLNEDNLTAL ILSSKAVSLIQPPMEKLASCYQDYDKIEVILKRLVRIAEMIIEDAKVPR
Sequences:
>Translated_209_residues MTFTPDKIQAKNYLTVIQELANYSSTSDTSRILERLSVLQVHDQDSRTAVLEASEGKNLPDRLVEIIKLFRIIHSKRQEI HSFYETAISKYGTINTLTAKRKPTDDEARIKQILTDYILKIESFFEKNDIGDEALIKEINRFLNELESLNLLNEDNLTAL ILSSKAVSLIQPPMEKLASCYQDYDKIEVILKRLVRIAEMIIEDAKVPR >Mature_208_residues TFTPDKIQAKNYLTVIQELANYSSTSDTSRILERLSVLQVHDQDSRTAVLEASEGKNLPDRLVEIIKLFRIIHSKRQEIH SFYETAISKYGTINTLTAKRKPTDDEARIKQILTDYILKIESFFEKNDIGDEALIKEINRFLNELESLNLLNEDNLTALI LSSKAVSLIQPPMEKLASCYQDYDKIEVILKRLVRIAEMIIEDAKVPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24058; Mature: 23927
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFTPDKIQAKNYLTVIQELANYSSTSDTSRILERLSVLQVHDQDSRTAVLEASEGKNLP CCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCH DRLVEIIKLFRIIHSKRQEIHSFYETAISKYGTINTLTAKRKPTDDEARIKQILTDYILK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHH IESFFEKNDIGDEALIKEINRFLNELESLNLLNEDNLTALILSSKAVSLIQPPMEKLASC HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH YQDYDKIEVILKRLVRIAEMIIEDAKVPR HHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TFTPDKIQAKNYLTVIQELANYSSTSDTSRILERLSVLQVHDQDSRTAVLEASEGKNLP CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCH DRLVEIIKLFRIIHSKRQEIHSFYETAISKYGTINTLTAKRKPTDDEARIKQILTDYILK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHH IESFFEKNDIGDEALIKEINRFLNELESLNLLNEDNLTALILSSKAVSLIQPPMEKLASC HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH YQDYDKIEVILKRLVRIAEMIIEDAKVPR HHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA