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The map label for this gene is yfgC [C]

Identifier: 116328035

GI number: 116328035

Start: 1563896

End: 1564744

Strand: Direct

Name: yfgC [C]

Synonym: LBL_1330

Alternate gene names: 116328035

Gene position: 1563896-1564744 (Clockwise)

Preceding gene: 116328034

Following gene: 116328036

Centisome position: 43.27

GC content: 42.17

Gene sequence:

>849_bases
ATGAAAAGGTTTTTTTCGAAGATATTTCTACTTTCCACCTTCTTTTTGTTTTCCGCGTGCGACGCGATCATTGATGCCGT
GGTTCCGATCGAATTGGATCTACAGATCGGAAAATCGTTTTTAGAAAACGCAAAAGACGGAAAGGAAGGAATGCATATTC
TAAAGAACGTTGTCCTTGAAAAATACGTAAAGTCCGTTTCGGACCGAATTCTAAAATCGGATCAGATCAAATACAAAAAA
GAATTCCCCTATAAGATTTCGATTTTGGACGACGACGATACGATCAACGCGGTTTGCACACCGGGCGGCTATATTTTCGT
TTATACCGGACTTTTAAAACTCATCCAAGACGAGGCAACGTTAGCCGCAATACTTGCGCACGAAATCGCACACGCGGAAA
AAAGGCATTCTGTAAAACAAATCATCAGTTCTTTAGGGATCTATTTTACGATCTATATTGGTCTGACGATTTTTCTGGGG
TCGGACGCGGCTAATCTCATCAACTTGGGTTCTCGAGTCGGAGGGGAAATTCTCACCCTGGCCAACAGCCGTTCTTCGGA
GGCGGAGGCGGACTCAATGAGTTTTGAATATTTGAAATCCACGAAATACTATCCCGGCGCTCTCGAATCATTTTTTATAC
TCATTGAAAAAAAGGAAAAGGAAGAAGGGGGAACGAGTCCGGATAAGAGAATTATAAAATTTTTATCCACACATCCTTTG
AACGACGAAAGAATTGCAGAAAATGCCAAAAGGCTCAAGAGTATCGGAAATCCGAAAGCTACTCGGGAAAATCTGTATAC
AGAACGTTATCAAGCCGTTATGAAACGTACGTCTGGAGAGGAGGACTGA

Upstream 100 bases:

>100_bases
AAGAGAGTTATTCTTTATGGCCGACACGGACCCATTTTAAAAAGAAATAACTCAAAATTCTGCTATGAATCTTTCGTTCT
TTTAAAAATAAATGCTTTCG

Downstream 100 bases:

>100_bases
CTCGTTTATACGAACTCAAAGGCATATTCTAAAATCGGATTGGAAGAAAATAACGTGGAAAAAGATTTCAAGGGCGGCTC
TATAAAATAGATTTCGGTTT

Product: Zinc dependent protease/lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MKRFFSKIFLLSTFFLFSACDAIIDAVVPIELDLQIGKSFLENAKDGKEGMHILKNVVLEKYVKSVSDRILKSDQIKYKK
EFPYKISILDDDDTINAVCTPGGYIFVYTGLLKLIQDEATLAAILAHEIAHAEKRHSVKQIISSLGIYFTIYIGLTIFLG
SDAANLINLGSRVGGEILTLANSRSSEAEADSMSFEYLKSTKYYPGALESFFILIEKKEKEEGGTSPDKRIIKFLSTHPL
NDERIAENAKRLKSIGNPKATRENLYTERYQAVMKRTSGEED

Sequences:

>Translated_282_residues
MKRFFSKIFLLSTFFLFSACDAIIDAVVPIELDLQIGKSFLENAKDGKEGMHILKNVVLEKYVKSVSDRILKSDQIKYKK
EFPYKISILDDDDTINAVCTPGGYIFVYTGLLKLIQDEATLAAILAHEIAHAEKRHSVKQIISSLGIYFTIYIGLTIFLG
SDAANLINLGSRVGGEILTLANSRSSEAEADSMSFEYLKSTKYYPGALESFFILIEKKEKEEGGTSPDKRIIKFLSTHPL
NDERIAENAKRLKSIGNPKATRENLYTERYQAVMKRTSGEED
>Mature_282_residues
MKRFFSKIFLLSTFFLFSACDAIIDAVVPIELDLQIGKSFLENAKDGKEGMHILKNVVLEKYVKSVSDRILKSDQIKYKK
EFPYKISILDDDDTINAVCTPGGYIFVYTGLLKLIQDEATLAAILAHEIAHAEKRHSVKQIISSLGIYFTIYIGLTIFLG
SDAANLINLGSRVGGEILTLANSRSSEAEADSMSFEYLKSTKYYPGALESFFILIEKKEKEEGGTSPDKRIIKFLSTHPL
NDERIAENAKRLKSIGNPKATRENLYTERYQAVMKRTSGEED

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=236, Percent_Identity=21.6101694915254, Blast_Score=67, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6322940, Length=181, Percent_Identity=28.7292817679558, Blast_Score=66, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011716
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48; PF07720 TPR_3 [H]

EC number: NA

Molecular weight: Translated: 31674; Mature: 31674

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFFSKIFLLSTFFLFSACDAIIDAVVPIELDLQIGKSFLENAKDGKEGMHILKNVVLE
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHH
KYVKSVSDRILKSDQIKYKKEFPYKISILDDDDTINAVCTPGGYIFVYTGLLKLIQDEAT
HHHHHHHHHHHHHCCCHHHHCCCEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHH
LAAILAHEIAHAEKRHSVKQIISSLGIYFTIYIGLTIFLGSDAANLINLGSRVGGEILTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEE
ANSRSSEAEADSMSFEYLKSTKYYPGALESFFILIEKKEKEEGGTSPDKRIIKFLSTHPL
ECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
NDERIAENAKRLKSIGNPKATRENLYTERYQAVMKRTSGEED
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKRFFSKIFLLSTFFLFSACDAIIDAVVPIELDLQIGKSFLENAKDGKEGMHILKNVVLE
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHH
KYVKSVSDRILKSDQIKYKKEFPYKISILDDDDTINAVCTPGGYIFVYTGLLKLIQDEAT
HHHHHHHHHHHHHCCCHHHHCCCEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHH
LAAILAHEIAHAEKRHSVKQIISSLGIYFTIYIGLTIFLGSDAANLINLGSRVGGEILTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEE
ANSRSSEAEADSMSFEYLKSTKYYPGALESFFILIEKKEKEEGGTSPDKRIIKFLSTHPL
ECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
NDERIAENAKRLKSIGNPKATRENLYTERYQAVMKRTSGEED
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]