Click here to switch to the map view.

The map label for this gene is 116328017

Identifier: 116328017

GI number: 116328017

Start: 1539613

End: 1540857

Strand: Direct

Name: 116328017

Synonym: LBL_1311

Alternate gene names: NA

Gene position: 1539613-1540857 (Clockwise)

Preceding gene: 116328013

Following gene: 116328018

Centisome position: 42.6

GC content: 44.1

Gene sequence:

>1245_bases
ATGATTATTCGAAAATCGATATGTTTGTTTTTAATCGGGTTTTTGTCACAGTGTAATGGGATTATAGATAATAAAAATAG
AAGCGTTATCAATAATTTGGCGCTCTTTTTACGTTCGGATTCATTTACGTATTCTCCGGAAGGAAACCCGGTAAGACTTT
TTGAAACAAAAGTAGTAGAAACGAATTTTCTCTACCAACTGAATCCAGAGTTGGTCGCGCGAGTGGGAGCTTTTTTTACG
ATCGATGCCTCTGATCCGCCGCGCGCGACTACATTTTCTCATGTCGCAGGAATTACTTTAGCTCCAAATCTTCGACCTGC
AAATTTTCAGTCCGTGGACTTTACTATCTTCATGTTAGATTCAGTCGGAGGAAATCTTTACTTCTCTGTCGGCGCTAACA
GACTTTACTATAAATCAAACACGGATTTTATCGGCGCAAGACGAATTTCTCTGGAAGAGAATGGACGAATCGCTTTTCTC
AAATCCGAAGCCGTCAATCTTTGTTGGTCCTTTGATGGGCAGACCTCCCAACGTATAAACGGATGTCAAAATACTGTTTC
TATATCCGGTGCCCAAGAATTGGTTTCGTTCGGTCCTTCCGCCTTTCTTGTTTACGGACCAAACATTGGTTTTCGTCGAT
TAGGAATCGATGGAGCGGTAACGACGATTTCAAGTCCGGTTCCGATTACAGGATTGCGAAGTGTATGGGCGGATCCAAGC
CTCATTCTCGTAGTCGATCAGGATGGCAAAAGGATAGTCGGTTGGGACCCAAGAGATCGGTCTATAATTTTCAAATGGAC
CGATCAAAAGCTCGTTACAGACACTGCTACTTTGGAACTGACTTTTACTGTTGCGGCCCCATTGCCCGGTGGTATGGGTT
TGGCGGTACTTCCGGAAAATTCAGATACGGTACTGTTCGTGAATCGTAGTTTCCAATTGATAGGAGGTTTAACGTCCCCG
AGCAGCGCTTATCCTCTCAGACGTATCAATCCGATTCAAGGAGTGTCTGTAAATTTATTGGGAGGGACGATCGGGATTTG
GTCTTCTCGCGGAGTGAACGTTTCTGCAATTGATCAAAATGCAAATTATGATTTCACGTATCTGTTACCCGATAGTCTCA
CTACGTTACCTCAAGTGCTCAATGATCCAACCGTGAGTGGTGCGCTTCAAGCTGATCCAAGGACGGACTTGCTGGATGTG
CCCGCTGTACGGAATTCGCTTACGAATTTAAGGAGTCAGCTATGA

Upstream 100 bases:

>100_bases
GTTATTCTAAATGTGACATATATAATAAATATAATATAAAAAAATAAGAAATAATAAAAATTGTATTGAATAAAAACAGA
ATATCTCTTAGGTAGTCGCC

Downstream 100 bases:

>100_bases
AGTTGAGAAAAATCGCATTTGTACTTTCGATATTTATAATTATCAATTCGAGTATTGGCTGTAATGAAGTAATGGTAAGT
ATGGAGATAGCAAATCGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MIIRKSICLFLIGFLSQCNGIIDNKNRSVINNLALFLRSDSFTYSPEGNPVRLFETKVVETNFLYQLNPELVARVGAFFT
IDASDPPRATTFSHVAGITLAPNLRPANFQSVDFTIFMLDSVGGNLYFSVGANRLYYKSNTDFIGARRISLEENGRIAFL
KSEAVNLCWSFDGQTSQRINGCQNTVSISGAQELVSFGPSAFLVYGPNIGFRRLGIDGAVTTISSPVPITGLRSVWADPS
LILVVDQDGKRIVGWDPRDRSIIFKWTDQKLVTDTATLELTFTVAAPLPGGMGLAVLPENSDTVLFVNRSFQLIGGLTSP
SSAYPLRRINPIQGVSVNLLGGTIGIWSSRGVNVSAIDQNANYDFTYLLPDSLTTLPQVLNDPTVSGALQADPRTDLLDV
PAVRNSLTNLRSQL

Sequences:

>Translated_414_residues
MIIRKSICLFLIGFLSQCNGIIDNKNRSVINNLALFLRSDSFTYSPEGNPVRLFETKVVETNFLYQLNPELVARVGAFFT
IDASDPPRATTFSHVAGITLAPNLRPANFQSVDFTIFMLDSVGGNLYFSVGANRLYYKSNTDFIGARRISLEENGRIAFL
KSEAVNLCWSFDGQTSQRINGCQNTVSISGAQELVSFGPSAFLVYGPNIGFRRLGIDGAVTTISSPVPITGLRSVWADPS
LILVVDQDGKRIVGWDPRDRSIIFKWTDQKLVTDTATLELTFTVAAPLPGGMGLAVLPENSDTVLFVNRSFQLIGGLTSP
SSAYPLRRINPIQGVSVNLLGGTIGIWSSRGVNVSAIDQNANYDFTYLLPDSLTTLPQVLNDPTVSGALQADPRTDLLDV
PAVRNSLTNLRSQL
>Mature_414_residues
MIIRKSICLFLIGFLSQCNGIIDNKNRSVINNLALFLRSDSFTYSPEGNPVRLFETKVVETNFLYQLNPELVARVGAFFT
IDASDPPRATTFSHVAGITLAPNLRPANFQSVDFTIFMLDSVGGNLYFSVGANRLYYKSNTDFIGARRISLEENGRIAFL
KSEAVNLCWSFDGQTSQRINGCQNTVSISGAQELVSFGPSAFLVYGPNIGFRRLGIDGAVTTISSPVPITGLRSVWADPS
LILVVDQDGKRIVGWDPRDRSIIFKWTDQKLVTDTATLELTFTVAAPLPGGMGLAVLPENSDTVLFVNRSFQLIGGLTSP
SSAYPLRRINPIQGVSVNLLGGTIGIWSSRGVNVSAIDQNANYDFTYLLPDSLTTLPQVLNDPTVSGALQADPRTDLLDV
PAVRNSLTNLRSQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45111; Mature: 45111

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIRKSICLFLIGFLSQCNGIIDNKNRSVINNLALFLRSDSFTYSPEGNPVRLFETKVVE
CEEHHHHHHHHHHHHHHCCCEECCCCHHHHHHEEEEEECCCEEECCCCCEEEEEEEEEEE
TNFLYQLNPELVARVGAFFTIDASDPPRATTFSHVAGITLAPNLRPANFQSVDFTIFMLD
EEEEEEECHHHHHHCCEEEEEECCCCCCCCCHHHHCCEEECCCCCCCCCCEEEEEEEEEE
SVGGNLYFSVGANRLYYKSNTDFIGARRISLEENGRIAFLKSEAVNLCWSFDGQTSQRIN
CCCCEEEEEECCCEEEEECCCCEEEEEEEEEECCCCEEEEECCCEEEEEECCCCCHHHHC
GCQNTVSISGAQELVSFGPSAFLVYGPNIGFRRLGIDGAVTTISSPVPITGLRSVWADPS
CCCCEEEECCHHHHHHCCCCEEEEECCCCCEEEECCCCEEEECCCCCCCCHHHHHCCCCC
LILVVDQDGKRIVGWDPRDRSIIFKWTDQKLVTDTATLELTFTVAAPLPGGMGLAVLPEN
EEEEECCCCCEEECCCCCCCEEEEEECCCEEEEEEEEEEEEEEEECCCCCCCEEEEEECC
SDTVLFVNRSFQLIGGLTSPSSAYPLRRINPIQGVSVNLLGGTIGIWSSRGVNVSAIDQN
CCEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCEEEEECCC
ANYDFTYLLPDSLTTLPQVLNDPTVSGALQADPRTDLLDVPAVRNSLTNLRSQL
CCCEEEEECCCCHHHHHHHHCCCCCCCEEECCCCCCEEECCHHHHHHHHHHHCC
>Mature Secondary Structure
MIIRKSICLFLIGFLSQCNGIIDNKNRSVINNLALFLRSDSFTYSPEGNPVRLFETKVVE
CEEHHHHHHHHHHHHHHCCCEECCCCHHHHHHEEEEEECCCEEECCCCCEEEEEEEEEEE
TNFLYQLNPELVARVGAFFTIDASDPPRATTFSHVAGITLAPNLRPANFQSVDFTIFMLD
EEEEEEECHHHHHHCCEEEEEECCCCCCCCCHHHHCCEEECCCCCCCCCCEEEEEEEEEE
SVGGNLYFSVGANRLYYKSNTDFIGARRISLEENGRIAFLKSEAVNLCWSFDGQTSQRIN
CCCCEEEEEECCCEEEEECCCCEEEEEEEEEECCCCEEEEECCCEEEEEECCCCCHHHHC
GCQNTVSISGAQELVSFGPSAFLVYGPNIGFRRLGIDGAVTTISSPVPITGLRSVWADPS
CCCCEEEECCHHHHHHCCCCEEEEECCCCCEEEECCCCEEEECCCCCCCCHHHHHCCCCC
LILVVDQDGKRIVGWDPRDRSIIFKWTDQKLVTDTATLELTFTVAAPLPGGMGLAVLPEN
EEEEECCCCCEEECCCCCCCEEEEEECCCEEEEEEEEEEEEEEEECCCCCCCEEEEEECC
SDTVLFVNRSFQLIGGLTSPSSAYPLRRINPIQGVSVNLLGGTIGIWSSRGVNVSAIDQN
CCEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCEEEEECCC
ANYDFTYLLPDSLTTLPQVLNDPTVSGALQADPRTDLLDVPAVRNSLTNLRSQL
CCCEEEEECCCCHHHHHHHHCCCCCCCEEECCCCCCEEECCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA