Click here to switch to the map view.

The map label for this gene is 116328015

Identifier: 116328015

GI number: 116328015

Start: 1535288

End: 1536307

Strand: Reverse

Name: 116328015

Synonym: LBL_1305

Alternate gene names: NA

Gene position: 1536307-1535288 (Counterclockwise)

Preceding gene: 116328016

Following gene: 116328014

Centisome position: 42.5

GC content: 36.86

Gene sequence:

>1020_bases
TTGGATTTCCCCGAATTACGTAGAATTCAGGATTTTTCGGTGGTTCATTTAAACGATTCTATTCGTGATACGAGTCTTTT
ACAGGCCGATGTGAATCTTTTCATTCTAGATTCGCCAAAAGGAAACGTTATTTATTCCAATTCAAATCAAAGTATTCGGT
ATTTTCATGACGATCGTATCGAAAACTATAAACAAATTTACGTTCTTCCCAACGGAAAAATCCTCTTCATTTCCTCCGAT
AACTTTTTAGATCTGTGTTACACATACAGTGCAACTGGTAACATTACCTTCACTCCAAACTGTACCAAAACGAACATAGG
CGCCTATTCAATTTTTGAATTTAAGCCGGATAACGGAGAAGTGATTTTATTGGATCACCAGAAGCGTTTAAAAAAATTCA
ATATAACCGACAATTCTTTAACCGCTTTGAACATAAATCCGCAACCGGTAGAAATTTTTTCTTTAGCCTATATAGCCTAT
AATAACGGTTTCCTAGGTATTTTAGAAAACAAAGGGACCAAGTTAACTTTATTCTCCGAAGGAAACGGACGATTCAATTT
TACAAACTCCTTAGAAGACTTTTCCTTCGTTACACAAAAAGGAATCAGGTACAACTCCCCTCAGTTTTTAGGCATCGCAG
TCAACTCAAGCGGCGTCATTTACACAACTTGCCCTTCCGAAGATGCGATCTACTCATTCAACGAAGATTTAAAAATCACC
GACGTTTACGAATTTCTCCCCGAGATAAGGCCTTATAAAAAAATTATCAATCCCCATAAGATCTTAATCTCAAAAAGGAA
CGAATACCTTTATGTTTCCAATCGATCCGCCTTAGAAATTTTGAAAGACTCTGCAAATAATCCAAGCGAAGACTTTCAAT
GGATTTTACCGGTTCAATCGGATTCCATTGAAAACGCATTTAAGAATTTAGTGAACTCAGGCGGATATGATCCAAACAAA
AGTACCTTCGATCAGCCCGGCATAAAAGAAATCGTTCAATCTTGGAAGGGGAATTTGTGA

Upstream 100 bases:

>100_bases
AAACGGCGAATCAACAAACCTCCAGGGTTCTCGGTTAGTTTCCAAATTCCAACTCAATCCGGAAATTTTCGAGAACGTAG
GTTTCCTTTACACCCGAAAC

Downstream 100 bases:

>100_bases
AAAAGAACTATTTTCCGAAACTATTAGTAATCGTCGCAGTTATTGGTTTAGGCTACAGTTATTACAATTGTAAAATCAGC
AAAGAACAATTAAAAAACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MDFPELRRIQDFSVVHLNDSIRDTSLLQADVNLFILDSPKGNVIYSNSNQSIRYFHDDRIENYKQIYVLPNGKILFISSD
NFLDLCYTYSATGNITFTPNCTKTNIGAYSIFEFKPDNGEVILLDHQKRLKKFNITDNSLTALNINPQPVEIFSLAYIAY
NNGFLGILENKGTKLTLFSEGNGRFNFTNSLEDFSFVTQKGIRYNSPQFLGIAVNSSGVIYTTCPSEDAIYSFNEDLKIT
DVYEFLPEIRPYKKIINPHKILISKRNEYLYVSNRSALEILKDSANNPSEDFQWILPVQSDSIENAFKNLVNSGGYDPNK
STFDQPGIKEIVQSWKGNL

Sequences:

>Translated_339_residues
MDFPELRRIQDFSVVHLNDSIRDTSLLQADVNLFILDSPKGNVIYSNSNQSIRYFHDDRIENYKQIYVLPNGKILFISSD
NFLDLCYTYSATGNITFTPNCTKTNIGAYSIFEFKPDNGEVILLDHQKRLKKFNITDNSLTALNINPQPVEIFSLAYIAY
NNGFLGILENKGTKLTLFSEGNGRFNFTNSLEDFSFVTQKGIRYNSPQFLGIAVNSSGVIYTTCPSEDAIYSFNEDLKIT
DVYEFLPEIRPYKKIINPHKILISKRNEYLYVSNRSALEILKDSANNPSEDFQWILPVQSDSIENAFKNLVNSGGYDPNK
STFDQPGIKEIVQSWKGNL
>Mature_339_residues
MDFPELRRIQDFSVVHLNDSIRDTSLLQADVNLFILDSPKGNVIYSNSNQSIRYFHDDRIENYKQIYVLPNGKILFISSD
NFLDLCYTYSATGNITFTPNCTKTNIGAYSIFEFKPDNGEVILLDHQKRLKKFNITDNSLTALNINPQPVEIFSLAYIAY
NNGFLGILENKGTKLTLFSEGNGRFNFTNSLEDFSFVTQKGIRYNSPQFLGIAVNSSGVIYTTCPSEDAIYSFNEDLKIT
DVYEFLPEIRPYKKIINPHKILISKRNEYLYVSNRSALEILKDSANNPSEDFQWILPVQSDSIENAFKNLVNSGGYDPNK
STFDQPGIKEIVQSWKGNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38660; Mature: 38660

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFPELRRIQDFSVVHLNDSIRDTSLLQADVNLFILDSPKGNVIYSNSNQSIRYFHDDRI
CCCHHHHCCCCEEEEEECCCCCCCEEEEECCEEEEEECCCCCEEEECCCCCEEEEECCCC
ENYKQIYVLPNGKILFISSDNFLDLCYTYSATGNITFTPNCTKTNIGAYSIFEFKPDNGE
CCEEEEEEEECCEEEEEECCCEEEEEEEEECCCCEEECCCCCCCCCCEEEEEEEECCCCC
VILLDHQKRLKKFNITDNSLTALNINPQPVEIFSLAYIAYNNGFLGILENKGTKLTLFSE
EEEEECHHHCEEECCCCCCEEEEECCCCCEEEEEEEEEEECCCEEEEEECCCCEEEEEEC
GNGRFNFTNSLEDFSFVTQKGIRYNSPQFLGIAVNSSGVIYTTCPSEDAIYSFNEDLKIT
CCCEEEECCCCHHHHHHHHCCCEECCCCEEEEEECCCCEEEEECCCCCCEEECCCCCEEE
DVYEFLPEIRPYKKIINPHKILISKRNEYLYVSNRSALEILKDSANNPSEDFQWILPVQS
HHHHHHHCCCHHHHHCCCEEEEEECCCCEEEEECCCHHHHHHHCCCCCCCCCEEEEEECC
DSIENAFKNLVNSGGYDPNKSTFDQPGIKEIVQSWKGNL
CHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MDFPELRRIQDFSVVHLNDSIRDTSLLQADVNLFILDSPKGNVIYSNSNQSIRYFHDDRI
CCCHHHHCCCCEEEEEECCCCCCCEEEEECCEEEEEECCCCCEEEECCCCCEEEEECCCC
ENYKQIYVLPNGKILFISSDNFLDLCYTYSATGNITFTPNCTKTNIGAYSIFEFKPDNGE
CCEEEEEEEECCEEEEEECCCEEEEEEEEECCCCEEECCCCCCCCCCEEEEEEEECCCCC
VILLDHQKRLKKFNITDNSLTALNINPQPVEIFSLAYIAYNNGFLGILENKGTKLTLFSE
EEEEECHHHCEEECCCCCCEEEEECCCCCEEEEEEEEEEECCCEEEEEECCCCEEEEEEC
GNGRFNFTNSLEDFSFVTQKGIRYNSPQFLGIAVNSSGVIYTTCPSEDAIYSFNEDLKIT
CCCEEEECCCCHHHHHHHHCCCEECCCCEEEEEECCCCEEEEECCCCCCEEECCCCCEEE
DVYEFLPEIRPYKKIINPHKILISKRNEYLYVSNRSALEILKDSANNPSEDFQWILPVQS
HHHHHHHCCCHHHHHCCCEEEEEECCCCEEEEECCCHHHHHHHCCCCCCCCCEEEEEECC
DSIENAFKNLVNSGGYDPNKSTFDQPGIKEIVQSWKGNL
CHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA