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The map label for this gene is 116328012

Identifier: 116328012

GI number: 116328012

Start: 1532708

End: 1533133

Strand: Reverse

Name: 116328012

Synonym: LBL_1303

Alternate gene names: NA

Gene position: 1533133-1532708 (Counterclockwise)

Preceding gene: 116328014

Following gene: 116328011

Centisome position: 42.42

GC content: 38.97

Gene sequence:

>426_bases
ATGAAAAACCACATCTACATGCTCCGTAAAAAACGGGGAATAAAACAATACGATATGGCGAGAGCGCTCGGAGTTTCTCC
AAGTTACCTTTCAAAAATCGAAACCGGAAGCCAGGATCCTACCGAAAAGTTCAAGCAATCCTGCGTTAAATATTTGAAAA
CCACTCTTGAAAGATTGTTTAACGAGCAGCCCGTTGAGGATGTTTATCCTGAATTTACGGAAGGGCTCACCAATAGGCTC
TGGGCAAAACGTAGGGAATTGGGAATCAAACAATACGATATGGCTAAAAAACTAAAGGTCTCCACTCCTTTTCTTTCTAA
GGTAGAACTCGGACTTTTAGAACCGCCGGAAGATTTTAAAAATATGGCGTCTAAAGCCTTAAAGATGAAAAAGGAAGAAT
TATTTCTTCAAAAAGTTGAATATTAA

Upstream 100 bases:

>100_bases
ACTAAATAATGAAATCATAATTTTGTCCAAAGTGTGTTGGAAATTTTTTCTTGAATTTACGTTTAACCGAAATACCCTTG
TCGATCGAGAGGGGAATTGA

Downstream 100 bases:

>100_bases
AATAAACTAAAGTTTTGCAAAAAAGGGAAGCAGACGCTTCCCTTTTTTACGTACGGTGATATTCGAGATTATGAAGTTGA
ATGTTTTTTTTGAACCAAGG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MKNHIYMLRKKRGIKQYDMARALGVSPSYLSKIETGSQDPTEKFKQSCVKYLKTTLERLFNEQPVEDVYPEFTEGLTNRL
WAKRRELGIKQYDMAKKLKVSTPFLSKVELGLLEPPEDFKNMASKALKMKKEELFLQKVEY

Sequences:

>Translated_141_residues
MKNHIYMLRKKRGIKQYDMARALGVSPSYLSKIETGSQDPTEKFKQSCVKYLKTTLERLFNEQPVEDVYPEFTEGLTNRL
WAKRRELGIKQYDMAKKLKVSTPFLSKVELGLLEPPEDFKNMASKALKMKKEELFLQKVEY
>Mature_141_residues
MKNHIYMLRKKRGIKQYDMARALGVSPSYLSKIETGSQDPTEKFKQSCVKYLKTTLERLFNEQPVEDVYPEFTEGLTNRL
WAKRRELGIKQYDMAKKLKVSTPFLSKVELGLLEPPEDFKNMASKALKMKKEELFLQKVEY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16574; Mature: 16574

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNHIYMLRKKRGIKQYDMARALGVSPSYLSKIETGSQDPTEKFKQSCVKYLKTTLERLF
CCCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
NEQPVEDVYPEFTEGLTNRLWAKRRELGIKQYDMAKKLKVSTPFLSKVELGLLEPPEDFK
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHH
NMASKALKMKKEELFLQKVEY
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKNHIYMLRKKRGIKQYDMARALGVSPSYLSKIETGSQDPTEKFKQSCVKYLKTTLERLF
CCCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
NEQPVEDVYPEFTEGLTNRLWAKRRELGIKQYDMAKKLKVSTPFLSKVELGLLEPPEDFK
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHH
NMASKALKMKKEELFLQKVEY
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA