| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is ylmA [H]
Identifier: 116327990
GI number: 116327990
Start: 1503895
End: 1504686
Strand: Reverse
Name: ylmA [H]
Synonym: LBL_1280
Alternate gene names: 116327990
Gene position: 1504686-1503895 (Counterclockwise)
Preceding gene: 116327991
Following gene: 116327985
Centisome position: 41.63
GC content: 36.87
Gene sequence:
>792_bases TTGAAAATTGATTCTTTATTGTCCATCGAGAAAATCAGTTATAGACCGACTGGAAAAACGATTTTAGATTCGGTGAGTTT TGAAATCAAAACAAACGAACATTGCGTTCTTTTGGGAAGGAATGAAGCCGGAAAAAGTACCCTTGTCAATCTGATCTACG GTATGATCTGGCCTACCTCAGGTAAAATCCGATTGTTTCAAGAAATCTACGGAGAAATACCAATCCAGGATTTAAGAAAA CGAATCGGCACCCTGGACTCCTCTCAACTAGAAAATTCACTTCAAAGAAAACTTACGGTAAAAGATGTAATACTAACAGG ATTCTTTCATACGATCGGTTATTACCGTGACCCATCCTCGAAAGAAGAAGCTAAAGCGTTACAAATCCTAAAAGATGCGA ATCTATCTTCCAAAAAAGATCAGCTCTATACGACTCTTTCCTCCGGCGAAAAGAAAAAAATCTTATTCTTACGAAGTCTC GTAAACGAACCGGATTTTCTTATTATGGACGAACCTTGTTCCTCTTTGGATCTAACCGCAAGAGAAGACTTTTTAGGATT CTTAAAAGAATATCATTCTAAAAAAAAATTCGCTTCCCTTTACATTACACATAGACTGGAAGAAATTCCAGAATTCTATT CCAAAGCGGTGTTGTTAAAAGACGGAAAAGTAACTCATTTCGGCCCAATCGAAGAGTGTTTTACCGAAAAAAATCTGGAG AATTTGTACGATATTCCACTTCAAGTTCAAAAAATCGAAGGCACTTGGTTCGTGATACCGAAACAAAAATGA
Upstream 100 bases:
>100_bases TTCGTAAATACGATCTTGCGGATAAAAAGACATTCGAAGAAACCTGCGAGAAACTCAGAAAGTTGTACGAAATTGCAAAA ATGGAGAACTAAAAAGCCGT
Downstream 100 bases:
>100_bases AAGGCATATCCCCAAAGCGGTTTCTATCGTTGTATAACTTTCTTTTAAACAAAAAAGTTTTCGAGATAGGTTCATATAAA TTTTTTCTAACTTATAAATC
Product: ATP-binding protein of an ABC transporter complex
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MKIDSLLSIEKISYRPTGKTILDSVSFEIKTNEHCVLLGRNEAGKSTLVNLIYGMIWPTSGKIRLFQEIYGEIPIQDLRK RIGTLDSSQLENSLQRKLTVKDVILTGFFHTIGYYRDPSSKEEAKALQILKDANLSSKKDQLYTTLSSGEKKKILFLRSL VNEPDFLIMDEPCSSLDLTAREDFLGFLKEYHSKKKFASLYITHRLEEIPEFYSKAVLLKDGKVTHFGPIEECFTEKNLE NLYDIPLQVQKIEGTWFVIPKQK
Sequences:
>Translated_263_residues MKIDSLLSIEKISYRPTGKTILDSVSFEIKTNEHCVLLGRNEAGKSTLVNLIYGMIWPTSGKIRLFQEIYGEIPIQDLRK RIGTLDSSQLENSLQRKLTVKDVILTGFFHTIGYYRDPSSKEEAKALQILKDANLSSKKDQLYTTLSSGEKKKILFLRSL VNEPDFLIMDEPCSSLDLTAREDFLGFLKEYHSKKKFASLYITHRLEEIPEFYSKAVLLKDGKVTHFGPIEECFTEKNLE NLYDIPLQVQKIEGTWFVIPKQK >Mature_263_residues MKIDSLLSIEKISYRPTGKTILDSVSFEIKTNEHCVLLGRNEAGKSTLVNLIYGMIWPTSGKIRLFQEIYGEIPIQDLRK RIGTLDSSQLENSLQRKLTVKDVILTGFFHTIGYYRDPSSKEEAKALQILKDANLSSKKDQLYTTLSSGEKKKILFLRSL VNEPDFLIMDEPCSSLDLTAREDFLGFLKEYHSKKKFASLYITHRLEEIPEFYSKAVLLKDGKVTHFGPIEECFTEKNLE NLYDIPLQVQKIEGTWFVIPKQK
Specific function: Part Of The Abc Transporter Complex Cysawtp Involved In Sulfate/Thiosulfate Import. Responsible For Energy Coupling To The Transport System. [C]
COG id: COG1119
COG function: function code P; ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI42490749, Length=229, Percent_Identity=26.6375545851528, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI27477115, Length=208, Percent_Identity=28.8461538461538, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI153792144, Length=214, Percent_Identity=27.5700934579439, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI27436953, Length=208, Percent_Identity=25, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI47078218, Length=225, Percent_Identity=26.2222222222222, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI45446740, Length=225, Percent_Identity=26.2222222222222, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI105990541, Length=225, Percent_Identity=24.4444444444444, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI27262624, Length=219, Percent_Identity=24.6575342465753, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI27262626, Length=219, Percent_Identity=24.6575342465753, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI31657092, Length=211, Percent_Identity=25.1184834123223, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI255708477, Length=236, Percent_Identity=26.6949152542373, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI6005701, Length=212, Percent_Identity=25, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1788761, Length=239, Percent_Identity=27.1966527196653, Blast_Score=104, Evalue=6e-24, Organism=Escherichia coli, GI1786975, Length=195, Percent_Identity=32.3076923076923, Blast_Score=94, Evalue=7e-21, Organism=Escherichia coli, GI1786803, Length=246, Percent_Identity=25.609756097561, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1786253, Length=216, Percent_Identity=27.3148148148148, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1789891, Length=221, Percent_Identity=28.0542986425339, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1788897, Length=224, Percent_Identity=31.25, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1786319, Length=193, Percent_Identity=28.4974093264249, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1788506, Length=231, Percent_Identity=25.5411255411255, Blast_Score=81, Evalue=7e-17, Organism=Escherichia coli, GI1787370, Length=223, Percent_Identity=26.0089686098655, Blast_Score=81, Evalue=9e-17, Organism=Escherichia coli, GI1787089, Length=222, Percent_Identity=25.2252252252252, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI87081834, Length=222, Percent_Identity=26.1261261261261, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1786345, Length=248, Percent_Identity=21.7741935483871, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1789593, Length=229, Percent_Identity=24.0174672489083, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1790739, Length=230, Percent_Identity=21.304347826087, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1787758, Length=217, Percent_Identity=22.1198156682028, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1789032, Length=215, Percent_Identity=26.9767441860465, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI1787164, Length=204, Percent_Identity=23.5294117647059, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI1788225, Length=236, Percent_Identity=23.3050847457627, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI1788165, Length=209, Percent_Identity=27.2727272727273, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1787547, Length=245, Percent_Identity=22.0408163265306, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1789873, Length=215, Percent_Identity=28.8372093023256, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1787112, Length=244, Percent_Identity=24.5901639344262, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1789864, Length=230, Percent_Identity=25.2173913043478, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI48994943, Length=223, Percent_Identity=26.0089686098655, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1790467, Length=208, Percent_Identity=25.9615384615385, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1786398, Length=237, Percent_Identity=25.7383966244726, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1787712, Length=203, Percent_Identity=25.1231527093596, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1790544, Length=251, Percent_Identity=21.9123505976096, Blast_Score=67, Evalue=8e-13, Organism=Escherichia coli, GI1790190, Length=224, Percent_Identity=27.2321428571429, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1789962, Length=217, Percent_Identity=23.0414746543779, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI87081791, Length=229, Percent_Identity=24.0174672489083, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI1789751, Length=244, Percent_Identity=27.4590163934426, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1787500, Length=216, Percent_Identity=23.1481481481481, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI48994997, Length=248, Percent_Identity=25.8064516129032, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1788053, Length=208, Percent_Identity=24.0384615384615, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI87082267, Length=228, Percent_Identity=23.6842105263158, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI1790525, Length=237, Percent_Identity=28.6919831223629, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI1788472, Length=235, Percent_Identity=27.2340425531915, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1786981, Length=216, Percent_Identity=25, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1787792, Length=229, Percent_Identity=24.4541484716157, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI87081782, Length=210, Percent_Identity=28.5714285714286, Blast_Score=61, Evalue=8e-11, Organism=Caenorhabditis elegans, GI71983523, Length=215, Percent_Identity=26.5116279069767, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI71983510, Length=215, Percent_Identity=26.5116279069767, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71983516, Length=215, Percent_Identity=26.5116279069767, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI115533608, Length=191, Percent_Identity=29.3193717277487, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193202349, Length=262, Percent_Identity=25.1908396946565, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI71996550, Length=257, Percent_Identity=30.3501945525292, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI193208177, Length=223, Percent_Identity=26.0089686098655, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI25146777, Length=217, Percent_Identity=26.2672811059908, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17558664, Length=255, Percent_Identity=27.0588235294118, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI212646699, Length=229, Percent_Identity=24.4541484716157, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI115534520, Length=241, Percent_Identity=22.8215767634855, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6324985, Length=257, Percent_Identity=26.0700389105058, Blast_Score=70, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6322957, Length=248, Percent_Identity=22.9838709677419, Blast_Score=63, Evalue=6e-11, Organism=Drosophila melanogaster, GI116007184, Length=266, Percent_Identity=24.812030075188, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI221500365, Length=263, Percent_Identity=24.7148288973384, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24666092, Length=232, Percent_Identity=28.0172413793103, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI281363262, Length=234, Percent_Identity=29.0598290598291, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24653245, Length=234, Percent_Identity=29.0598290598291, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI62484234, Length=232, Percent_Identity=26.2931034482759, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI221512771, Length=203, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24582014, Length=190, Percent_Identity=27.3684210526316, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24582012, Length=190, Percent_Identity=27.3684210526316, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI45550390, Length=242, Percent_Identity=25.2066115702479, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: 3.6.3.25 [C]
Molecular weight: Translated: 30235; Mature: 30235
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIDSLLSIEKISYRPTGKTILDSVSFEIKTNEHCVLLGRNEAGKSTLVNLIYGMIWPTS CCCCHHHHHHHHCCCCCCHHHHHCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCC GKIRLFQEIYGEIPIQDLRKRIGTLDSSQLENSLQRKLTVKDVILTGFFHTIGYYRDPSS CCEEHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC KEEAKALQILKDANLSSKKDQLYTTLSSGEKKKILFLRSLVNEPDFLIMDEPCSSLDLTA HHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCH REDFLGFLKEYHSKKKFASLYITHRLEEIPEFYSKAVLLKDGKVTHFGPIEECFTEKNLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHCCHH NLYDIPLQVQKIEGTWFVIPKQK HHHCCCEEEEEECCEEEEEECCC >Mature Secondary Structure MKIDSLLSIEKISYRPTGKTILDSVSFEIKTNEHCVLLGRNEAGKSTLVNLIYGMIWPTS CCCCHHHHHHHHCCCCCCHHHHHCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCC GKIRLFQEIYGEIPIQDLRKRIGTLDSSQLENSLQRKLTVKDVILTGFFHTIGYYRDPSS CCEEHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC KEEAKALQILKDANLSSKKDQLYTTLSSGEKKKILFLRSLVNEPDFLIMDEPCSSLDLTA HHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCH REDFLGFLKEYHSKKKFASLYITHRLEEIPEFYSKAVLLKDGKVTHFGPIEECFTEKNLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHCCHH NLYDIPLQVQKIEGTWFVIPKQK HHHCCCEEEEEECCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]