| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
Click here to switch to the map view.
The map label for this gene is ytoA [H]
Identifier: 116327986
GI number: 116327986
Start: 1498104
End: 1498646
Strand: Direct
Name: ytoA [H]
Synonym: LBL_1276
Alternate gene names: 116327986
Gene position: 1498104-1498646 (Clockwise)
Preceding gene: 116327983
Following gene: 116327987
Centisome position: 41.45
GC content: 43.83
Gene sequence:
>543_bases ATGAAATCAAATTACCAAATTCTGGAATATATGGGAAAAAAACCCCGGATTCACGAATCCGTTTTTCTGGCTCCGGGTTC TCAGGTGGTCGGAGATGTAGTGATTGGAAAAAATTCTTCCATTTGGTTTCAGACCTTGGTTCGAGGAGACGTCAATTTTA TTCGGATCGGGGAGAATGTGAACATTCAAGATCTCACGATCATTCATGTCGCAAGAGATGTATATCCGGTTGAAATCGGA AATAACGTGTCCATCGGACATAGAGCGACGATTCATGGATGTAAACTCAAGGACAACGCGTTTGTGGGAATGTGCGCCAC TTTGATGGACGATGTGGAAGTCGGGGAATTTGCGTTTATCGGAGCCGGAACTTTGGTTACGCCGGGGAAAAAAATTCCTC CCGGAGTTTTGGTAATGGGGTCGCCTGGAAAGATCGTTCGGGATATCACCGATAAGGAAAGAGAAATTATCACTCGAACG GCCGGGAATTATCTCAAATACAAAGAAAATTATCTACAAGATCCGTATTATTCGAGAGGTTAG
Upstream 100 bases:
>100_bases GCGTACATTCTTTTGTGGATCGAAAATAGGGTCAAAGAAAATCTTTGTTTTAAACTTGTTTTGATTCTTTAGAAAAGTGT CTGAAAAGGGAGAAGGATTG
Downstream 100 bases:
>100_bases AAGTGAGAAATGATAAGTTCGTCAGGAATGAATAGATCCGTTTTCTGAAGAAGAATTTGTAGTCTTCTTTAAAAATCGAA GTTACACAAATCGATTTACG
Product: carbonic anhydrase/acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MKSNYQILEYMGKKPRIHESVFLAPGSQVVGDVVIGKNSSIWFQTLVRGDVNFIRIGENVNIQDLTIIHVARDVYPVEIG NNVSIGHRATIHGCKLKDNAFVGMCATLMDDVEVGEFAFIGAGTLVTPGKKIPPGVLVMGSPGKIVRDITDKEREIITRT AGNYLKYKENYLQDPYYSRG
Sequences:
>Translated_180_residues MKSNYQILEYMGKKPRIHESVFLAPGSQVVGDVVIGKNSSIWFQTLVRGDVNFIRIGENVNIQDLTIIHVARDVYPVEIG NNVSIGHRATIHGCKLKDNAFVGMCATLMDDVEVGEFAFIGAGTLVTPGKKIPPGVLVMGSPGKIVRDITDKEREIITRT AGNYLKYKENYLQDPYYSRG >Mature_180_residues MKSNYQILEYMGKKPRIHESVFLAPGSQVVGDVVIGKNSSIWFQTLVRGDVNFIRIGENVNIQDLTIIHVARDVYPVEIG NNVSIGHRATIHGCKLKDNAFVGMCATLMDDVEVGEFAFIGAGTLVTPGKKIPPGVLVMGSPGKIVRDITDKEREIITRT AGNYLKYKENYLQDPYYSRG
Specific function: Unknown
COG id: COG0663
COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI87082240, Length=164, Percent_Identity=37.1951219512195, Blast_Score=124, Evalue=4e-30, Organism=Escherichia coli, GI1787667, Length=147, Percent_Identity=34.0136054421769, Blast_Score=95, Evalue=2e-21, Organism=Escherichia coli, GI87081681, Length=144, Percent_Identity=33.3333333333333, Blast_Score=88, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19930; Mature: 19930
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSNYQILEYMGKKPRIHESVFLAPGSQVVGDVVIGKNSSIWFQTLVRGDVNFIRIGENV CCCCHHHHHHCCCCCCCCCEEEECCCCHHEEEEEECCCCCCEEEEHHHCCCEEEEECCCC NIQDLTIIHVARDVYPVEIGNNVSIGHRATIHGCKLKDNAFVGMCATLMDDVEVGEFAFI CCCEEEEEEEECCEEEEEECCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCEEEE GAGTLVTPGKKIPPGVLVMGSPGKIVRDITDKEREIITRTAGNYLKYKENYLQDPYYSRG CCCEEECCCCCCCCCEEEECCCCCEEHHHHHHHHHHHHHCCCCCEEECHHHCCCCCCCCC >Mature Secondary Structure MKSNYQILEYMGKKPRIHESVFLAPGSQVVGDVVIGKNSSIWFQTLVRGDVNFIRIGENV CCCCHHHHHHCCCCCCCCCEEEECCCCHHEEEEEECCCCCCEEEEHHHCCCEEEEECCCC NIQDLTIIHVARDVYPVEIGNNVSIGHRATIHGCKLKDNAFVGMCATLMDDVEVGEFAFI CCCEEEEEEEECCEEEEEECCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCEEEE GAGTLVTPGKKIPPGVLVMGSPGKIVRDITDKEREIITRTAGNYLKYKENYLQDPYYSRG CCCEEECCCCCCCCCEEEECCCCCEEHHHHHHHHHHHHHCCCCCEEECHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]