| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327974
Identifier: 116327974
GI number: 116327974
Start: 1486145
End: 1486567
Strand: Direct
Name: 116327974
Synonym: LBL_1263
Alternate gene names: NA
Gene position: 1486145-1486567 (Clockwise)
Preceding gene: 116327973
Following gene: 116327975
Centisome position: 41.12
GC content: 35.93
Gene sequence:
>423_bases ATGGCAACGGAAAATTCGGTAAAACTAATTGGCGAGAAGATCAAGGCTGTATTTGAAGCGGCAGGGATTAGCCAACGACC AGTTGCCCAAAAACTGAATCTGACTCCAGGCGGATTGAACAGTAAACTTACTGGTAGGATCGAATCCTTTGCTCCGTCGT TTCTGTATTTTATAAATTCTGAATTTGGTGCTGACTTAAATTGGTTAATTGATGATGCACAACCTGTAACTCCCGTCATT TACATGGAAGGGGTTACTCGTAAGGTGAAAGATGACGATCAACTATTTAATCAGATGAAAAATACCGAAGGCATTAAAGA TATTATTAAAAATCTCTTAGATCTTTCTCCTCAAGAGAGAAATACATTTAAGGATTTGATTACTCAATATTCAACTCTTA GAAAAAACTTAAAGAAAAATTAA
Upstream 100 bases:
>100_bases TGGTCTGGCATAGAAGCTCCTAAATCATGCGTTAAAGCATAAAAACAAATGTATTCAAAATGAATATATTTGTCAAAACG TATTTTATTTGATTGTATAT
Downstream 100 bases:
>100_bases GCAATTCGAACTTTAGGAATAATTAACCATTCAAAAGTTCGTGAGTTAGTTTTCATTTCACCTTAAGAATGATGGACCAC ATTTTAGAAATAATTTCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MATENSVKLIGEKIKAVFEAAGISQRPVAQKLNLTPGGLNSKLTGRIESFAPSFLYFINSEFGADLNWLIDDAQPVTPVI YMEGVTRKVKDDDQLFNQMKNTEGIKDIIKNLLDLSPQERNTFKDLITQYSTLRKNLKKN
Sequences:
>Translated_140_residues MATENSVKLIGEKIKAVFEAAGISQRPVAQKLNLTPGGLNSKLTGRIESFAPSFLYFINSEFGADLNWLIDDAQPVTPVI YMEGVTRKVKDDDQLFNQMKNTEGIKDIIKNLLDLSPQERNTFKDLITQYSTLRKNLKKN >Mature_139_residues ATENSVKLIGEKIKAVFEAAGISQRPVAQKLNLTPGGLNSKLTGRIESFAPSFLYFINSEFGADLNWLIDDAQPVTPVIY MEGVTRKVKDDDQLFNQMKNTEGIKDIIKNLLDLSPQERNTFKDLITQYSTLRKNLKKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15764; Mature: 15633
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATENSVKLIGEKIKAVFEAAGISQRPVAQKLNLTPGGLNSKLTGRIESFAPSFLYFINS CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCC EFGADLNWLIDDAQPVTPVIYMEGVTRKVKDDDQLFNQMKNTEGIKDIIKNLLDLSPQER CCCCCHHEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCC NTFKDLITQYSTLRKNLKKN HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ATENSVKLIGEKIKAVFEAAGISQRPVAQKLNLTPGGLNSKLTGRIESFAPSFLYFINS CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCC EFGADLNWLIDDAQPVTPVIYMEGVTRKVKDDDQLFNQMKNTEGIKDIIKNLLDLSPQER CCCCCHHEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCC NTFKDLITQYSTLRKNLKKN HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA