| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
Click here to switch to the map view.
The map label for this gene is 116327972
Identifier: 116327972
GI number: 116327972
Start: 1482915
End: 1483697
Strand: Direct
Name: 116327972
Synonym: LBL_1261
Alternate gene names: NA
Gene position: 1482915-1483697 (Clockwise)
Preceding gene: 116327971
Following gene: 116327973
Centisome position: 41.03
GC content: 35.76
Gene sequence:
>783_bases ATGGGACACGAACGATTAGGAATTTTACCCAAAACTAGAAGTTGGATCAATATTACTTCTAATCTTGGTGTAGCTATAGG CGAGAATCCTGAATTTGCTTCAAAATTAGCTGGGCTAACTTTATTACAAGTTAGACAGCGATATGAAAAACTTAAAAATG ATTCAGGGGTTCAAGCAGCTTTCTCATTTTTAATTGCTATTTGCTCTCAAAATTTACCATCAAACGCTGAAGGGAAGTTT ACAAACGTTGATCTTAATCTTGAGTCTAATCCATCTCCACTTAATATTGCCTTTGGGTTAACTGAATGGGTTGAGAAACA TAAAGATAAGCAAGAATACGCTGAACTTGCTGCGAGAGCCGCAGCGGATGCCATAGCTAAATGGTATAGAGAAAATTCTG AACAGAATCTTCTTTTTGAATCAGGTTTAACAGCTACAGATGTATGGGGCAATTTTTCAGGGAGTGACTTTTGTGTTATT TCGAGAAATTTTTTCGCGAATTTAACTGAAAGATATTTGAAATACTTCTTGGAAAGAAGTGCATCTGAATTGTCTCCAGA CTTAAATAGCAGAAAGAAGTTTGAACAGGCGCTCTCTTCTTTTATGAATGAAGTTTCGAATCACGCTTTTGAAACTTCTA AAATTACTCAGTCATTCGCAGCAGGATGGTATAATAAAAATGTAAAAAACTCTAGGCCTGCTGATAAAGAAGTAGCGGGT TTTTTAAAAGTCGCATTTGGTAAATTACGAGAAGAGATAATCATTGAAGAGGCGAAAAAGTGA
Upstream 100 bases:
>100_bases GATATTCGAAGGATATTTATCATAATATAGAATTTCTTTAAATGAACCAACCTTATCATTCTTTTTGGTACTAAAACGTA ATTAGGTAAACATATACAAA
Downstream 100 bases:
>100_bases CGCCTCGTAAAAAAAGTTTTATATTAGCTAATAATGCAAAAAATGAAAATAAATATAACGATCCTATTAGCTTAAATTAT TCGAAAATAGATAACTTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MGHERLGILPKTRSWINITSNLGVAIGENPEFASKLAGLTLLQVRQRYEKLKNDSGVQAAFSFLIAICSQNLPSNAEGKF TNVDLNLESNPSPLNIAFGLTEWVEKHKDKQEYAELAARAAADAIAKWYRENSEQNLLFESGLTATDVWGNFSGSDFCVI SRNFFANLTERYLKYFLERSASELSPDLNSRKKFEQALSSFMNEVSNHAFETSKITQSFAAGWYNKNVKNSRPADKEVAG FLKVAFGKLREEIIIEEAKK
Sequences:
>Translated_260_residues MGHERLGILPKTRSWINITSNLGVAIGENPEFASKLAGLTLLQVRQRYEKLKNDSGVQAAFSFLIAICSQNLPSNAEGKF TNVDLNLESNPSPLNIAFGLTEWVEKHKDKQEYAELAARAAADAIAKWYRENSEQNLLFESGLTATDVWGNFSGSDFCVI SRNFFANLTERYLKYFLERSASELSPDLNSRKKFEQALSSFMNEVSNHAFETSKITQSFAAGWYNKNVKNSRPADKEVAG FLKVAFGKLREEIIIEEAKK >Mature_259_residues GHERLGILPKTRSWINITSNLGVAIGENPEFASKLAGLTLLQVRQRYEKLKNDSGVQAAFSFLIAICSQNLPSNAEGKFT NVDLNLESNPSPLNIAFGLTEWVEKHKDKQEYAELAARAAADAIAKWYRENSEQNLLFESGLTATDVWGNFSGSDFCVIS RNFFANLTERYLKYFLERSASELSPDLNSRKKFEQALSSFMNEVSNHAFETSKITQSFAAGWYNKNVKNSRPADKEVAGF LKVAFGKLREEIIIEEAKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29191; Mature: 29060
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHERLGILPKTRSWINITSNLGVAIGENPEFASKLAGLTLLQVRQRYEKLKNDSGVQAA CCCCCCCCCCCCCCCEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH FSFLIAICSQNLPSNAEGKFTNVDLNLESNPSPLNIAFGLTEWVEKHKDKQEYAELAARA HHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHH AADAIAKWYRENSEQNLLFESGLTATDVWGNFSGSDFCVISRNFFANLTERYLKYFLERS HHHHHHHHHHHCCCCCCHHHCCCCHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHH ASELSPDLNSRKKFEQALSSFMNEVSNHAFETSKITQSFAAGWYNKNVKNSRPADKEVAG HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH FLKVAFGKLREEIIIEEAKK HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GHERLGILPKTRSWINITSNLGVAIGENPEFASKLAGLTLLQVRQRYEKLKNDSGVQAA CCCCCCCCCCCCCCEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH FSFLIAICSQNLPSNAEGKFTNVDLNLESNPSPLNIAFGLTEWVEKHKDKQEYAELAARA HHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHH AADAIAKWYRENSEQNLLFESGLTATDVWGNFSGSDFCVISRNFFANLTERYLKYFLERS HHHHHHHHHHHCCCCCCHHHCCCCHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHH ASELSPDLNSRKKFEQALSSFMNEVSNHAFETSKITQSFAAGWYNKNVKNSRPADKEVAG HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH FLKVAFGKLREEIIIEEAKK HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA