| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
Click here to switch to the map view.
The map label for this gene is petE
Identifier: 116327871
GI number: 116327871
Start: 1365975
End: 1367981
Strand: Direct
Name: petE
Synonym: LBL_1155
Alternate gene names: NA
Gene position: 1365975-1367981 (Clockwise)
Preceding gene: 116327869
Following gene: 116327872
Centisome position: 37.79
GC content: 44.2
Gene sequence:
>2007_bases ATGAAAGAGTCAGGTTTCGAAATCAAAAAAGTGTTGATCTTGCTTCTATTTGGAATTTCAATCGGGATTTTTATTTCCGC TTGTTTTGGGGAAAAGAAAGTTGGGGTCGAAGGTTTCGCTCACGTGTTGATGATCGATAATTCCTTTTCTCCGCCGATGC AGAAAATTCCAGTCGGAGGAGTCATTGAGTTTGTCAATTCCGGAAACAACCCGCATAACGCGATCGCCGTGGATAAAAGT TGGTCCACGGAAAAATCCTTTGGAAGTATCGTAATGCCCCGCGGCTCCAAGACAAAAGTCACCTTTCTTCAGGAAGGAGT ATTTCCTTATTTTTGTTCTTTTCACGCGACTTCAGACGGTAAGAATGGAATGGTTGGAGATGTCGTAGTGGGAAACGCTT TCTACAATCCCGCCGCTAAATCCGGCAAATCCTGGAAAAACGTCGCTCAATTTTCTGGAATTACACGCAAAGTCCCTTCT TCCTATCCTACGATTCAAAATGCCGTAGACGCTGCAAATCCGGGCGATCTCATTTTGATTAGCGAGGGTGTTTATTTGGA AGAAGTGACCGTTACTACACCTTCCATTACGATTCGCGGTGTGGATCGTAATAAGGTCGTCATTGACGGTCAGTTTCAAA GAGGGAACGGAATCATGGTCGTTGCGGCGGACGGAGTTGTGATAGAGAACATGACCGTTAGAAACGCTACGTTGAACGGT TTTTATTGGACCGGAGTAAGGGGTTTCAGAGGCTCTTACTTAACCGCACATAATAATGGGGACTACGGTATTTATGCGTT CGACTCGGTAAACGGTGTGATCGAACATTCCTACGCATCCGGTTCTCCCGATTCCGGAATTTATATCGGCCAGTGTTATC CCTGTAAGGCGATTCTTTACGACGTCGTTTCCGAACACAACGCTCTTGGTTATTCCGGGACGAATTCCGGCGGTGAACTT TATCTCATCAGTTCCGTTTGGAAAAATAATATCGTGGGAGTTGCGCCGAACACTCTCGATAGGGAACTACTTCCTCCTGA AAGAGAGACTACGATCATCGGGAACTTAATCTATAATAACAATAACCCTAAGGCTCCGATTGCGGCTTTAGAGTATCCTT CTTTTGGAAACGGTATTTTGATCGCGGGGGGAATTTCGAATACCGTGCGTAAGAACGTAATAATCGATCATGAGAACAAT GGGATCGTAATTCTTCCTAATCTGGACGAAAACTTTTGGATTTCGCATAACAACGTAGTTCGGGATAATATCGTCTACAA TTCGGGAAGAGCGGACATCGCTCTTGTGGGACCGATGAGCACTGGAAACTGTTTTTCCGGAAACGAATACAGGACCGAAC TTCCCGCTTTTTTGGAGAAGTGGAACGGTTGCGATTCTTTTTTTAGACTTCCAATGGGAGGAGATCTTTCCATGATGCTC GGCGCTCTTGGATTGATGGTACAGGCTTCCGACGGAAATTTCCCTTCCGGAAATTATAAGGAACAACCGATCCCGGGTCC TCAAATGAATATGCCTAGCGCCGCTCCGGTGAAACCTGCGTTAACCGCTTTTGAAGATTTCAATCTGGATTTGGATAAAA TTGCTCTTCCGGAAGAAACTGAAAAAATTTTAAAATCGATCCCAAGAAAACCTTCCCCATCGACCGGTGCGATCACTCTG GTAAAACCGAGAAGTCTTTTTTCGTTTTTTTATCATTGGTTGGGATTTTTACTTCCGTTTGCAATTTATATCTGTTGGAC TTCCATGTCTCTGTTCGATCTTAAGGATAGAATGGATTTGGATCGAAATAAAAAGTTGTACTGGATCGCGACGATCACTC TGATTCCGATTTTGAGTTCCGGAATTTATCTTCTTGGAGGGGGGAGCAAATATCCGAACTGGTTTAAAAGGACCTTGGTT TTGGGAGGAATCGTAGCGTTCTTTCTACTTTTGGTTTACACCGGAATTTCTCTCATGAACGGCATTGGAACCAAAACGAT AGGTTAA
Upstream 100 bases:
>100_bases CAATCTTTTGGATCGGTCGCAAATATGTAATCCTATTCAGAACAATCCTCCGATCCAGTATACAATAAAATTCCAAAGAG TCCGGGGGAGTTCATCAAAA
Downstream 100 bases:
>100_bases GAATTTTAGAATATTCGTAAGTTTTTATAGGAGAAAATATGGAACAAGCTGTCGTCGGTGGACCCGGTTTTTTCGCTTTA TTATTCAATTTTTACGGGTA
Product: plastocyanin
Products: NA
Alternate protein names: Plastocyanin; Signal Peptide; Cytochrome-C Peroxidase; Lipoprotein
Number of amino acids: Translated: 668; Mature: 668
Protein sequence:
>668_residues MKESGFEIKKVLILLLFGISIGIFISACFGEKKVGVEGFAHVLMIDNSFSPPMQKIPVGGVIEFVNSGNNPHNAIAVDKS WSTEKSFGSIVMPRGSKTKVTFLQEGVFPYFCSFHATSDGKNGMVGDVVVGNAFYNPAAKSGKSWKNVAQFSGITRKVPS SYPTIQNAVDAANPGDLILISEGVYLEEVTVTTPSITIRGVDRNKVVIDGQFQRGNGIMVVAADGVVIENMTVRNATLNG FYWTGVRGFRGSYLTAHNNGDYGIYAFDSVNGVIEHSYASGSPDSGIYIGQCYPCKAILYDVVSEHNALGYSGTNSGGEL YLISSVWKNNIVGVAPNTLDRELLPPERETTIIGNLIYNNNNPKAPIAALEYPSFGNGILIAGGISNTVRKNVIIDHENN GIVILPNLDENFWISHNNVVRDNIVYNSGRADIALVGPMSTGNCFSGNEYRTELPAFLEKWNGCDSFFRLPMGGDLSMML GALGLMVQASDGNFPSGNYKEQPIPGPQMNMPSAAPVKPALTAFEDFNLDLDKIALPEETEKILKSIPRKPSPSTGAITL VKPRSLFSFFYHWLGFLLPFAIYICWTSMSLFDLKDRMDLDRNKKLYWIATITLIPILSSGIYLLGGGSKYPNWFKRTLV LGGIVAFFLLLVYTGISLMNGIGTKTIG
Sequences:
>Translated_668_residues MKESGFEIKKVLILLLFGISIGIFISACFGEKKVGVEGFAHVLMIDNSFSPPMQKIPVGGVIEFVNSGNNPHNAIAVDKS WSTEKSFGSIVMPRGSKTKVTFLQEGVFPYFCSFHATSDGKNGMVGDVVVGNAFYNPAAKSGKSWKNVAQFSGITRKVPS SYPTIQNAVDAANPGDLILISEGVYLEEVTVTTPSITIRGVDRNKVVIDGQFQRGNGIMVVAADGVVIENMTVRNATLNG FYWTGVRGFRGSYLTAHNNGDYGIYAFDSVNGVIEHSYASGSPDSGIYIGQCYPCKAILYDVVSEHNALGYSGTNSGGEL YLISSVWKNNIVGVAPNTLDRELLPPERETTIIGNLIYNNNNPKAPIAALEYPSFGNGILIAGGISNTVRKNVIIDHENN GIVILPNLDENFWISHNNVVRDNIVYNSGRADIALVGPMSTGNCFSGNEYRTELPAFLEKWNGCDSFFRLPMGGDLSMML GALGLMVQASDGNFPSGNYKEQPIPGPQMNMPSAAPVKPALTAFEDFNLDLDKIALPEETEKILKSIPRKPSPSTGAITL VKPRSLFSFFYHWLGFLLPFAIYICWTSMSLFDLKDRMDLDRNKKLYWIATITLIPILSSGIYLLGGGSKYPNWFKRTLV LGGIVAFFLLLVYTGISLMNGIGTKTIG >Mature_668_residues MKESGFEIKKVLILLLFGISIGIFISACFGEKKVGVEGFAHVLMIDNSFSPPMQKIPVGGVIEFVNSGNNPHNAIAVDKS WSTEKSFGSIVMPRGSKTKVTFLQEGVFPYFCSFHATSDGKNGMVGDVVVGNAFYNPAAKSGKSWKNVAQFSGITRKVPS SYPTIQNAVDAANPGDLILISEGVYLEEVTVTTPSITIRGVDRNKVVIDGQFQRGNGIMVVAADGVVIENMTVRNATLNG FYWTGVRGFRGSYLTAHNNGDYGIYAFDSVNGVIEHSYASGSPDSGIYIGQCYPCKAILYDVVSEHNALGYSGTNSGGEL YLISSVWKNNIVGVAPNTLDRELLPPERETTIIGNLIYNNNNPKAPIAALEYPSFGNGILIAGGISNTVRKNVIIDHENN GIVILPNLDENFWISHNNVVRDNIVYNSGRADIALVGPMSTGNCFSGNEYRTELPAFLEKWNGCDSFFRLPMGGDLSMML GALGLMVQASDGNFPSGNYKEQPIPGPQMNMPSAAPVKPALTAFEDFNLDLDKIALPEETEKILKSIPRKPSPSTGAITL VKPRSLFSFFYHWLGFLLPFAIYICWTSMSLFDLKDRMDLDRNKKLYWIATITLIPILSSGIYLLGGGSKYPNWFKRTLV LGGIVAFFLLLVYTGISLMNGIGTKTIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72688; Mature: 72688
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKESGFEIKKVLILLLFGISIGIFISACFGEKKVGVEGFAHVLMIDNSFSPPMQKIPVGG CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHCCCCH VIEFVNSGNNPHNAIAVDKSWSTEKSFGSIVMPRGSKTKVTFLQEGVFPYFCSFHATSDG HHHHHHCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCEEEEECCCCCEEEEEEEECCCC KNGMVGDVVVGNAFYNPAAKSGKSWKNVAQFSGITRKVPSSYPTIQNAVDAANPGDLILI CCCEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCHHCCCCCCCCHHHHHCCCCCCCEEEE SEGVYLEEVTVTTPSITIRGVDRNKVVIDGQFQRGNGIMVVAADGVVIENMTVRNATLNG ECCCEEEEEEEECCCEEEEECCCCEEEEECEEECCCCEEEEEECCEEEECEEEECEEECC FYWTGVRGFRGSYLTAHNNGDYGIYAFDSVNGVIEHSYASGSPDSGIYIGQCYPCKAILY EEEECCCCCCCCEEEEECCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEECCCHHHHHH DVVSEHNALGYSGTNSGGELYLISSVWKNNIVGVAPNTLDRELLPPERETTIIGNLIYNN HHHHCCCCCCCCCCCCCCEEEEEEEHHHCCEEEECCCCCCCCCCCCCCCEEEEEEEEECC NNPKAPIAALEYPSFGNGILIAGGISNTVRKNVIIDHENNGIVILPNLDENFWISHNNVV CCCCCCEEEEECCCCCCCEEEECCCCCCCCCCEEEEECCCCEEEEECCCCCEEECCCCEE RDNIVYNSGRADIALVGPMSTGNCFSGNEYRTELPAFLEKWNGCDSFFRLPMGGDLSMML ECCEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHEECCCCCCHHHHH GALGLMVQASDGNFPSGNYKEQPIPGPQMNMPSAAPVKPALTAFEDFNLDLDKIALPEET HHHCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHCCCCHHH EKILKSIPRKPSPSTGAITLVKPRSLFSFFYHWLGFLLPFAIYICWTSMSLFDLKDRMDL HHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC DRNKKLYWIATITLIPILSSGIYLLGGGSKYPNWFKRTLVLGGIVAFFLLLVYTGISLMN CCCCEEEEEEHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIGTKTIG CCCCCCCC >Mature Secondary Structure MKESGFEIKKVLILLLFGISIGIFISACFGEKKVGVEGFAHVLMIDNSFSPPMQKIPVGG CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHCCCCH VIEFVNSGNNPHNAIAVDKSWSTEKSFGSIVMPRGSKTKVTFLQEGVFPYFCSFHATSDG HHHHHHCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCEEEEECCCCCEEEEEEEECCCC KNGMVGDVVVGNAFYNPAAKSGKSWKNVAQFSGITRKVPSSYPTIQNAVDAANPGDLILI CCCEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCHHCCCCCCCCHHHHHCCCCCCCEEEE SEGVYLEEVTVTTPSITIRGVDRNKVVIDGQFQRGNGIMVVAADGVVIENMTVRNATLNG ECCCEEEEEEEECCCEEEEECCCCEEEEECEEECCCCEEEEEECCEEEECEEEECEEECC FYWTGVRGFRGSYLTAHNNGDYGIYAFDSVNGVIEHSYASGSPDSGIYIGQCYPCKAILY EEEECCCCCCCCEEEEECCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEECCCHHHHHH DVVSEHNALGYSGTNSGGELYLISSVWKNNIVGVAPNTLDRELLPPERETTIIGNLIYNN HHHHCCCCCCCCCCCCCCEEEEEEEHHHCCEEEECCCCCCCCCCCCCCCEEEEEEEEECC NNPKAPIAALEYPSFGNGILIAGGISNTVRKNVIIDHENNGIVILPNLDENFWISHNNVV CCCCCCEEEEECCCCCCCEEEECCCCCCCCCCEEEEECCCCEEEEECCCCCEEECCCCEE RDNIVYNSGRADIALVGPMSTGNCFSGNEYRTELPAFLEKWNGCDSFFRLPMGGDLSMML ECCEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHEECCCCCCHHHHH GALGLMVQASDGNFPSGNYKEQPIPGPQMNMPSAAPVKPALTAFEDFNLDLDKIALPEET HHHCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHCCCCHHH EKILKSIPRKPSPSTGAITLVKPRSLFSFFYHWLGFLLPFAIYICWTSMSLFDLKDRMDL HHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC DRNKKLYWIATITLIPILSSGIYLLGGGSKYPNWFKRTLVLGGIVAFFLLLVYTGISLMN CCCCEEEEEEHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIGTKTIG CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA