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The map label for this gene is fliF [H]

Identifier: 116327841

GI number: 116327841

Start: 1315047

End: 1316747

Strand: Reverse

Name: fliF [H]

Synonym: LBL_1118

Alternate gene names: 116327841

Gene position: 1316747-1315047 (Counterclockwise)

Preceding gene: 116327844

Following gene: 116327840

Centisome position: 36.43

GC content: 44.21

Gene sequence:

>1701_bases
ATGCCTGAGCAAGTGCAGAAAATCTTAAACAACATCCGGGAATTTTTTACGACTCTGGATACGACTAAAAAACTTATACT
CGGAGGGGTCGCGTTAACCGTTCTGGTTGCGATCGGAATTCTTTCCACAATCTCCCTTCAAAAAAACCGAGTAGTTCTGT
TTAAAGACTTAACAAGTAAAGACTTTGCCGAAGTAACCAAAAAATTGGACTCTCTCGGTTATCAGTACGGGAGTTCAGAT
ACGAGCGTAATTACAGTCGACCCGGAGCAAAGACAAGAAATTGTAACAAAACTTGCCCAGGAAAACTTAATTCCCGCCGG
AGTTCAGGGTTGGGAACTTTTCAACGTGGATAAATTCACCGAAACACAGTTCGATAAGGATATCAAAAAATACAGAGCCC
TCAAAGGCGCCATAGAACAATCCCTGATGACTCTCCGTTCAGTAGACAAAGCATACGTAAACATAGCTTTCCCCGAAGAC
GAACTCTTCAGTTCGAATTCATCTCCCGTCAAAGCATCCGTAATTCTCCACTATATTCCGGGAGTAGAATCCCTTTCTAG
AAAAGAAGTCAAAGGGATCGTCAACTTGGTTTCAAGAGCCGTTCCCAAATTAAAACCGGAAAACGTCAGCGTCGCCGACG
CGGACGGCAAAATCATCAGCGACTTCGAAGAGGACTTGGAAAAGGAAAGATTGGAACTCCGAATCGTTCAGGAAAAATTA
AGAATCGGCGAAGAACAAAGGATCCAACGTTTGATAGACATGAGAAACACTCTCCGCTGGCTACTCGGAGGGGAAGACAG
AGTCGATATTACTCGTTTTGAATATAACTTGAACTGGGATAAGGAATCCTATAAAGACAATTCCGTATCTCCGGTTGTAG
CGATTCCCGATAATCCGAACACCCCTTATTCCGAACTAAAGCTTGTGGACGGTTATTCTCTCAAAGTTTCCTCCAAAGAA
ACCAAAGAAGATTTCAAAGGGAGAGGTTTTACTCCGGACGGCCCTGCTGGAACCGAACCGAACATCCCTCCCGGTTATAA
AGATACTGACTATCAAAAATCGGAATATAGTAAATCCGAAAACATCAATAACTACGAATTCAACAGAAGAGTTTCCGAAG
TTCAAAAACAACCTTGGAAAGTGGAGAAAGTAAATCTCTCTGTCGTAATCGACGGTATGTGGGAAAAGAAAGAGAAAGAG
GACGGAACCGGTTACGATCGCAAATACATTCCGGTTTCCGAAGACGAGCTCAGACAGATTCGTAAAAACCTCGAGTCCGC
CGTCGGTATCGATAAGGCAAGAGGTGATCAAATTTCGGTCATCACGATTCCCAAAGACAGATCTTCTCAGTTCGCGGCGG
AAGACGAAGAACTCCGCAAACAAAAGGCAATCCGCCAGATGATCATCGCATCCTTAGTCATCATTCTTCTTTTAATCGTA
AGCATCCTAGTCTACAGAGCGATCAAAAAGGAAATCGCAAGAAGAAGAAGACTCAGAGAAGAAGAGCTTGCAGCCCAACA
ACAAATGATGAGAGAAGCGGCACTTCGAGTAATGGACGAAGGTGGAGCGGAAGTGGAACTCTCCCTCGACGAAAAATACA
GAAGAGAACTTCTCGAAAACGCAATCAACCTCGCAAGAGAAAAACCGGAAGAAGTAGCACAACTTCTCCGCACATGGCTC
TCTGAAGAGGAAGCCAGCTGA

Upstream 100 bases:

>100_bases
ATACCCCGAAGAAAACTTTTTAAAAAAATTGGAAAAGAGATTGTACTTTCTTTCCGATATTTGATTATGTCCCGTATTGT
AAATTCGGTGGAGATCCGCT

Downstream 100 bases:

>100_bases
TGGATCCCCTGTCCTCCAGACAAAACAGAGCGGGAAGTCTTCTTCGGATTTTGGGAGAACACCTCCCTCCGGAAGTCTAT
CGTCATCTGGGTCCGGAGGC

Product: flagellar MS-ring protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 566; Mature: 565

Protein sequence:

>566_residues
MPEQVQKILNNIREFFTTLDTTKKLILGGVALTVLVAIGILSTISLQKNRVVLFKDLTSKDFAEVTKKLDSLGYQYGSSD
TSVITVDPEQRQEIVTKLAQENLIPAGVQGWELFNVDKFTETQFDKDIKKYRALKGAIEQSLMTLRSVDKAYVNIAFPED
ELFSSNSSPVKASVILHYIPGVESLSRKEVKGIVNLVSRAVPKLKPENVSVADADGKIISDFEEDLEKERLELRIVQEKL
RIGEEQRIQRLIDMRNTLRWLLGGEDRVDITRFEYNLNWDKESYKDNSVSPVVAIPDNPNTPYSELKLVDGYSLKVSSKE
TKEDFKGRGFTPDGPAGTEPNIPPGYKDTDYQKSEYSKSENINNYEFNRRVSEVQKQPWKVEKVNLSVVIDGMWEKKEKE
DGTGYDRKYIPVSEDELRQIRKNLESAVGIDKARGDQISVITIPKDRSSQFAAEDEELRKQKAIRQMIIASLVIILLLIV
SILVYRAIKKEIARRRRLREEELAAQQQMMREAALRVMDEGGAEVELSLDEKYRRELLENAINLAREKPEEVAQLLRTWL
SEEEAS

Sequences:

>Translated_566_residues
MPEQVQKILNNIREFFTTLDTTKKLILGGVALTVLVAIGILSTISLQKNRVVLFKDLTSKDFAEVTKKLDSLGYQYGSSD
TSVITVDPEQRQEIVTKLAQENLIPAGVQGWELFNVDKFTETQFDKDIKKYRALKGAIEQSLMTLRSVDKAYVNIAFPED
ELFSSNSSPVKASVILHYIPGVESLSRKEVKGIVNLVSRAVPKLKPENVSVADADGKIISDFEEDLEKERLELRIVQEKL
RIGEEQRIQRLIDMRNTLRWLLGGEDRVDITRFEYNLNWDKESYKDNSVSPVVAIPDNPNTPYSELKLVDGYSLKVSSKE
TKEDFKGRGFTPDGPAGTEPNIPPGYKDTDYQKSEYSKSENINNYEFNRRVSEVQKQPWKVEKVNLSVVIDGMWEKKEKE
DGTGYDRKYIPVSEDELRQIRKNLESAVGIDKARGDQISVITIPKDRSSQFAAEDEELRKQKAIRQMIIASLVIILLLIV
SILVYRAIKKEIARRRRLREEELAAQQQMMREAALRVMDEGGAEVELSLDEKYRRELLENAINLAREKPEEVAQLLRTWL
SEEEAS
>Mature_565_residues
PEQVQKILNNIREFFTTLDTTKKLILGGVALTVLVAIGILSTISLQKNRVVLFKDLTSKDFAEVTKKLDSLGYQYGSSDT
SVITVDPEQRQEIVTKLAQENLIPAGVQGWELFNVDKFTETQFDKDIKKYRALKGAIEQSLMTLRSVDKAYVNIAFPEDE
LFSSNSSPVKASVILHYIPGVESLSRKEVKGIVNLVSRAVPKLKPENVSVADADGKIISDFEEDLEKERLELRIVQEKLR
IGEEQRIQRLIDMRNTLRWLLGGEDRVDITRFEYNLNWDKESYKDNSVSPVVAIPDNPNTPYSELKLVDGYSLKVSSKET
KEDFKGRGFTPDGPAGTEPNIPPGYKDTDYQKSEYSKSENINNYEFNRRVSEVQKQPWKVEKVNLSVVIDGMWEKKEKED
GTGYDRKYIPVSEDELRQIRKNLESAVGIDKARGDQISVITIPKDRSSQFAAEDEELRKQKAIRQMIIASLVIILLLIVS
ILVYRAIKKEIARRRRLREEELAAQQQMMREAALRVMDEGGAEVELSLDEKYRRELLENAINLAREKPEEVAQLLRTWLS
EEEAS

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=571, Percent_Identity=24.6935201401051, Blast_Score=131, Evalue=1e-31,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 64640; Mature: 64509

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEQVQKILNNIREFFTTLDTTKKLILGGVALTVLVAIGILSTISLQKNRVVLFKDLTSK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCH
DFAEVTKKLDSLGYQYGSSDTSVITVDPEQRQEIVTKLAQENLIPAGVQGWELFNVDKFT
HHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHH
ETQFDKDIKKYRALKGAIEQSLMTLRSVDKAYVNIAFPEDELFSSNSSPVKASVILHYIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHCCCCCCCCHHHHHHHCC
GVESLSRKEVKGIVNLVSRAVPKLKPENVSVADADGKIISDFEEDLEKERLELRIVQEKL
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
RIGEEQRIQRLIDMRNTLRWLLGGEDRVDITRFEYNLNWDKESYKDNSVSPVVAIPDNPN
HCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCHHHCCCCCCCCEEECCCCCC
TPYSELKLVDGYSLKVSSKETKEDFKGRGFTPDGPAGTEPNIPPGYKDTDYQKSEYSKSE
CCHHHEEEECCCEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
NINNYEFNRRVSEVQKQPWKVEKVNLSVVIDGMWEKKEKEDGTGYDRKYIPVSEDELRQI
CCCCCHHHHHHHHHHHCCCEEEEEEEEEEEECCHHHCCCCCCCCCCCCCCCCCHHHHHHH
RKNLESAVGIDKARGDQISVITIPKDRSSQFAAEDEELRKQKAIRQMIIASLVIILLLIV
HHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SILVYRAIKKEIARRRRLREEELAAQQQMMREAALRVMDEGGAEVELSLDEKYRRELLEN
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH
AINLAREKPEEVAQLLRTWLSEEEAS
HHHHHHCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PEQVQKILNNIREFFTTLDTTKKLILGGVALTVLVAIGILSTISLQKNRVVLFKDLTSK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCH
DFAEVTKKLDSLGYQYGSSDTSVITVDPEQRQEIVTKLAQENLIPAGVQGWELFNVDKFT
HHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHH
ETQFDKDIKKYRALKGAIEQSLMTLRSVDKAYVNIAFPEDELFSSNSSPVKASVILHYIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHCCCCCCCCHHHHHHHCC
GVESLSRKEVKGIVNLVSRAVPKLKPENVSVADADGKIISDFEEDLEKERLELRIVQEKL
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
RIGEEQRIQRLIDMRNTLRWLLGGEDRVDITRFEYNLNWDKESYKDNSVSPVVAIPDNPN
HCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCHHHCCCCCCCCEEECCCCCC
TPYSELKLVDGYSLKVSSKETKEDFKGRGFTPDGPAGTEPNIPPGYKDTDYQKSEYSKSE
CCHHHEEEECCCEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
NINNYEFNRRVSEVQKQPWKVEKVNLSVVIDGMWEKKEKEDGTGYDRKYIPVSEDELRQI
CCCCCHHHHHHHHHHHCCCEEEEEEEEEEEECCHHHCCCCCCCCCCCCCCCCCHHHHHHH
RKNLESAVGIDKARGDQISVITIPKDRSSQFAAEDEELRKQKAIRQMIIASLVIILLLIV
HHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SILVYRAIKKEIARRRRLREEELAAQQQMMREAALRVMDEGGAEVELSLDEKYRRELLEN
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH
AINLAREKPEEVAQLLRTWLSEEEAS
HHHHHHCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]