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The map label for this gene is 116327819

Identifier: 116327819

GI number: 116327819

Start: 1277179

End: 1277523

Strand: Reverse

Name: 116327819

Synonym: LBL_1087

Alternate gene names: NA

Gene position: 1277523-1277179 (Counterclockwise)

Preceding gene: 116327825

Following gene: 116327818

Centisome position: 35.34

GC content: 33.62

Gene sequence:

>345_bases
GTGAACGCAGTATACCGTGTGTACGTGTTCTTTAAAGATTTTTATTTTTCAAAAGTTCCTTTTTTAAGGAGAAAGCGCCT
AAACTCTTTATCTGGACAAGCAAAATCGAATATTGGAGGAGAAATTTCTGACGAAGAGCGAAAATCCTTCTTTAATCAGC
TTAGAGCCGCAAGGATCGAAGTAAATCTAACTCAAGCACAAGTATCTGAGAGATTAGGAAAATATCAGAGTTATATTTCA
AAAGTTGAATCCGGAAAGAAAAGATTGTTTATAGAAGATTTTATCAGATTATGCGAACTTTATAATAAACCGCCTGAGTA
TTTCTATTCCGTATTTTCTAAGTGA

Upstream 100 bases:

>100_bases
AAATCCTTTTTCCTTTCGGATTGCCTGAATCTTTCTTCCGACTTTTTGTAAAAATTCTTCTAATTCCACGCACGGTATAT
TGCGGCATGGTTGACAAAAA

Downstream 100 bases:

>100_bases
TGATTTATGAAATTGAAGAGTTCACCCGAGTAAAATCTGCGAAGCAGTTTTAACGAGGGCAAAAAGGAAATTCGGACGAT
TAGTCTTGGCGTCCCGATCG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MNAVYRVYVFFKDFYFSKVPFLRRKRLNSLSGQAKSNIGGEISDEERKSFFNQLRAARIEVNLTQAQVSERLGKYQSYIS
KVESGKKRLFIEDFIRLCELYNKPPEYFYSVFSK

Sequences:

>Translated_114_residues
MNAVYRVYVFFKDFYFSKVPFLRRKRLNSLSGQAKSNIGGEISDEERKSFFNQLRAARIEVNLTQAQVSERLGKYQSYIS
KVESGKKRLFIEDFIRLCELYNKPPEYFYSVFSK
>Mature_114_residues
MNAVYRVYVFFKDFYFSKVPFLRRKRLNSLSGQAKSNIGGEISDEERKSFFNQLRAARIEVNLTQAQVSERLGKYQSYIS
KVESGKKRLFIEDFIRLCELYNKPPEYFYSVFSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13550; Mature: 13550

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAVYRVYVFFKDFYFSKVPFLRRKRLNSLSGQAKSNIGGEISDEERKSFFNQLRAARIE
CCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHH
VNLTQAQVSERLGKYQSYISKVESGKKRLFIEDFIRLCELYNKPPEYFYSVFSK
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCHHHHHHHHCC
>Mature Secondary Structure
MNAVYRVYVFFKDFYFSKVPFLRRKRLNSLSGQAKSNIGGEISDEERKSFFNQLRAARIE
CCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHH
VNLTQAQVSERLGKYQSYISKVESGKKRLFIEDFIRLCELYNKPPEYFYSVFSK
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA