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The map label for this gene is mthZIM [H]

Identifier: 116327802

GI number: 116327802

Start: 1250984

End: 1252066

Strand: Reverse

Name: mthZIM [H]

Synonym: LBL_1066

Alternate gene names: 116327802

Gene position: 1252066-1250984 (Counterclockwise)

Preceding gene: 116327803

Following gene: 116327801

Centisome position: 34.64

GC content: 41.64

Gene sequence:

>1083_bases
ATGAAACAAACGATTCATAGGATTCAATTTCGGGATTCGAGAAAAATGTTTCCGCTCAAATCGGAATCCGTGGATTTAGT
TCTCACCTCACCTCCTTATCCGATGATCGAAATGTGGGACGAACTCTTTTTCGGCTTTTCAAAGGAAATTCAAGAAAATT
TTCCTACCGATCCCAACCTTTCTTATGAAAGAATTCATATCGAACTCGATAAAGTTTGGAAAGAATCTTTCCGCGTTCTG
AAAAACGGAGGTTTTCTCGTAATCAATATCGGAGACGCAACGAGAAACACCTCCGCAGGCTTTCAGATTTATATGAATCA
CGCGAGAATTTTACAGGGATGTAACTCGATCGGTTTTCAAAGTCTTCCTGGAATCCTTTGGAGAAAACAAACGAACTCGC
CCAACAAGTTTATGGGTTCCGGAATGCTTCCGGCGGGGGCGTATGTGACATTAGAGCATGAGCATATTTTAATATTCAGA
AAGAGTAATAAGAGAAAGTTTGTGACTAAGGCGGAACAGTTCGCCCGTGCGCAAAGCGCGTTTTTTTGGGAAGAACGCAA
TTTGTGGTTTACCGACCTTTGGGATTTTAAGGGAAAAAAGCAGAGTTTGAACCCTCTTACAGGAAGAGATAGAAGTGCGG
CATATCCTTTGGAGCTTGCAAACAGAATCATACTGATGTATTCTTTAAAGGGGGATGTCGTTTTGGATCCTTTTTGGGGA
ACTGGGACGACTACTTTGGCGGCGATCGGGAATTGCAGAAATTCGATCGGATTTGATTTGAATCCGGGTTTATTCCAAAC
CCATTTTGAAAATCTATCTTCTCTCGGCGAAAGTCTCAATCGAATCGTTGAAAAACGGAAACGAGATCACGATCTTTTTG
TACAAACCAGGCAAAACGAAGGAAAACCTCTTCTTCATTTCAATCAAAATTTGCAGACTCCCGTTGTAACTAAGCAGGAA
AAATTTCTGAACTTAGAAAAAATTATCGGACTCCTTCGCAACTCGGACGAGGAAATCGTAGTCGAATATTCCCCTCTGAT
TCAAACTTCGCAACTCGAATCGGTTCCCGTGATACAGCCATAA

Upstream 100 bases:

>100_bases
GTGTATCAAAGAAAATATCTCGCGAGTTTTGTATTGTCGTAAAGAGAAAACGTTTTGAGTGGACAAGAAAATAAAAATCG
AAATTCTAATTTTCATAGTT

Downstream 100 bases:

>100_bases
TAGTATTCGTTTACTTCCAGAGGCTAAAAATCGATAACCAGGGTAATGTTTTTTCAATCAAGCCAAATTCTTTATTGAAA
ACTGAGTCGCCTAAGTCGAT

Product: DNA methylase

Products: NA

Alternate protein names: M.MthZI; N-4 cytosine-specific methyltransferase MthZI [H]

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MKQTIHRIQFRDSRKMFPLKSESVDLVLTSPPYPMIEMWDELFFGFSKEIQENFPTDPNLSYERIHIELDKVWKESFRVL
KNGGFLVINIGDATRNTSAGFQIYMNHARILQGCNSIGFQSLPGILWRKQTNSPNKFMGSGMLPAGAYVTLEHEHILIFR
KSNKRKFVTKAEQFARAQSAFFWEERNLWFTDLWDFKGKKQSLNPLTGRDRSAAYPLELANRIILMYSLKGDVVLDPFWG
TGTTTLAAIGNCRNSIGFDLNPGLFQTHFENLSSLGESLNRIVEKRKRDHDLFVQTRQNEGKPLLHFNQNLQTPVVTKQE
KFLNLEKIIGLLRNSDEEIVVEYSPLIQTSQLESVPVIQP

Sequences:

>Translated_360_residues
MKQTIHRIQFRDSRKMFPLKSESVDLVLTSPPYPMIEMWDELFFGFSKEIQENFPTDPNLSYERIHIELDKVWKESFRVL
KNGGFLVINIGDATRNTSAGFQIYMNHARILQGCNSIGFQSLPGILWRKQTNSPNKFMGSGMLPAGAYVTLEHEHILIFR
KSNKRKFVTKAEQFARAQSAFFWEERNLWFTDLWDFKGKKQSLNPLTGRDRSAAYPLELANRIILMYSLKGDVVLDPFWG
TGTTTLAAIGNCRNSIGFDLNPGLFQTHFENLSSLGESLNRIVEKRKRDHDLFVQTRQNEGKPLLHFNQNLQTPVVTKQE
KFLNLEKIIGLLRNSDEEIVVEYSPLIQTSQLESVPVIQP
>Mature_360_residues
MKQTIHRIQFRDSRKMFPLKSESVDLVLTSPPYPMIEMWDELFFGFSKEIQENFPTDPNLSYERIHIELDKVWKESFRVL
KNGGFLVINIGDATRNTSAGFQIYMNHARILQGCNSIGFQSLPGILWRKQTNSPNKFMGSGMLPAGAYVTLEHEHILIFR
KSNKRKFVTKAEQFARAQSAFFWEERNLWFTDLWDFKGKKQSLNPLTGRDRSAAYPLELANRIILMYSLKGDVVLDPFWG
TGTTTLAAIGNCRNSIGFDLNPGLFQTHFENLSSLGESLNRIVEKRKRDHDLFVQTRQNEGKPLLHFNQNLQTPVVTKQE
KFLNLEKIIGLLRNSDEEIVVEYSPLIQTSQLESVPVIQP

Specific function: This methylase recognizes the double-stranded sequence CTAG, causes specific methylation on C-1 on both strands, and protects the DNA from cleavage by the MthZI endonuclease [H]

COG id: COG0863

COG function: function code L; DNA modification methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N(4)/N(6)-methyltransferase family. N(4) subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002941
- InterPro:   IPR017985
- InterPro:   IPR001091 [H]

Pfam domain/function: PF01555 N6_N4_Mtase [H]

EC number: =2.1.1.113 [H]

Molecular weight: Translated: 41519; Mature: 41519

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: PS00093 N4_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQTIHRIQFRDSRKMFPLKSESVDLVLTSPPYPMIEMWDELFFGFSKEIQENFPTDPNL
CCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCHHHHHHHCCCCCCCC
SYERIHIELDKVWKESFRVLKNGGFLVINIGDATRNTSAGFQIYMNHARILQGCNSIGFQ
CEEEEEEEHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEHHHHHHHCCCCCCCC
SLPGILWRKQTNSPNKFMGSGMLPAGAYVTLEHEHILIFRKSNKRKFVTKAEQFARAQSA
CCCCCEEECCCCCCCHHCCCCCCCCCEEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHH
FFWEERNLWFTDLWDFKGKKQSLNPLTGRDRSAAYPLELANRIILMYSLKGDVVLDPFWG
EEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCEEEEEEEECCCEEEECCCC
TGTTTLAAIGNCRNSIGFDLNPGLFQTHFENLSSLGESLNRIVEKRKRDHDLFVQTRQNE
CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC
GKPLLHFNQNLQTPVVTKQEKFLNLEKIIGLLRNSDEEIVVEYSPLIQTSQLESVPVIQP
CCEEEEECCCCCCCCCCCHHHHCCHHHHHHHHHCCCCEEEEEECCCEECCCCCCCCCCCC
>Mature Secondary Structure
MKQTIHRIQFRDSRKMFPLKSESVDLVLTSPPYPMIEMWDELFFGFSKEIQENFPTDPNL
CCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCHHHHHHHCCCCCCCC
SYERIHIELDKVWKESFRVLKNGGFLVINIGDATRNTSAGFQIYMNHARILQGCNSIGFQ
CEEEEEEEHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEHHHHHHHCCCCCCCC
SLPGILWRKQTNSPNKFMGSGMLPAGAYVTLEHEHILIFRKSNKRKFVTKAEQFARAQSA
CCCCCEEECCCCCCCHHCCCCCCCCCEEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHH
FFWEERNLWFTDLWDFKGKKQSLNPLTGRDRSAAYPLELANRIILMYSLKGDVVLDPFWG
EEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCEEEEEEEECCCEEEECCCC
TGTTTLAAIGNCRNSIGFDLNPGLFQTHFENLSSLGESLNRIVEKRKRDHDLFVQTRQNE
CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC
GKPLLHFNQNLQTPVVTKQEKFLNLEKIIGLLRNSDEEIVVEYSPLIQTSQLESVPVIQP
CCEEEEECCCCCCCCCCCHHHHCCHHHHHHHHHCCCCEEEEEECCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1408820; 1336177 [H]