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The map label for this gene is pdtaS [H]

Identifier: 116327776

GI number: 116327776

Start: 1206983

End: 1208068

Strand: Direct

Name: pdtaS [H]

Synonym: LBL_1034

Alternate gene names: 116327776

Gene position: 1206983-1208068 (Clockwise)

Preceding gene: 116327775

Following gene: 116327778

Centisome position: 33.39

GC content: 41.53

Gene sequence:

>1086_bases
ATGTATGCGGAGGAGAATTTTCTCGTTCGAGTACGGGCCATCTATCTGTTTACCTTCAACGCGATCGCGTTCGTATTTGC
GGGAATCACGTTTTCCGTCTTCGTTTACGAAGGGGAACTTACGTATCGCCCGAGTTTTATTCTTCTAATCACCGCCTCGG
GAATTTCGATCGCTCTTATCCTTTCCGGACGTTTCCGGTGGGCCGTTTGGATAACTCTGGCTTCCGTTCTACTTGGAATC
TCTCTCGGAATTTTTTTTGGGGATCTGGAAGGAAACCATGTATTGAGCCTGCCGATACTCGTCATCGTATTTCTTCTTTT
TACGAACATACGGACGACCATATTCGTTTCATTATATTCTTTTTTTCTTATGTATATTTTTCTTTACAGAATGTACGGGA
GCGGGGGACTAAAGACGAGTTTTGTCGTGGATTCCGTGTTGGGTTTTTTGTTTTTTACGCTGATGTCCGTTTTGACGGTT
AATCTTTTGAATTTGTATATCAAGGAAAAGGACGAGTTGATCAAGGAAATCCATCACAGGGTGAGGAATAATCTGCAGGT
GTTATGCGGGCTTGCGGATCTGCATAAAAACGACTGGTCTGATTCGAAGAAGGTTTTGATCAAGTTTCAGAACCGAATTC
TTGCGATGTCCGAAGTGCATAACTACTTGTACAAATCGGACAACTATCATAAAATAGAATTTTCCGAAGTAATCGAAAGA
ATCGTGGCGGATATGAAGAACAAAAACGATGATTTTAAGGTGAACGTTCTGAATCATTCCGAACGAATTGAACTTCCGAT
TGAAATCGCGATACCTTGTGCGATGATCTTCAACGAGCTTTTGAACAATTCATTTATGCACGCATTCAAAGAAACGAAGG
ATCCGAATATCGAGATTCTTTTTTCGAAAACGGGCGAAAATTGTAATTTGACCATTAAGGACAACGGAACTGGAATTCCC
TTGCCCATAGATATGAAAAAACAGAAGACGACCGGGTTTACGTTGGTTCATATCTTAAGCAAACAAATCCGCGCCAACGT
AGAATTTTTCAATGACAACGGGCTCGTCGCCGTTCTGAAATTTTGA

Upstream 100 bases:

>100_bases
ATAGAAACGGAGGCTTTTTTAAAAACGAAGGATTTTTCGAAAAATCCGGTCTATGATGGATTGACGAGAGGATTTATGTT
CTTAAAAAAAAATTCAAAAA

Downstream 100 bases:

>100_bases
TCTTTGTCTCTAACGAAAAAATGAGTCGGTTTTGAAATTTAAAACGGCATCGACTTGGAGTGAATCGGATATTTTAAACT
TTTAATGACATTCGCCTTAC

Product: sensor histidine kinase of a two component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MYAEENFLVRVRAIYLFTFNAIAFVFAGITFSVFVYEGELTYRPSFILLITASGISIALILSGRFRWAVWITLASVLLGI
SLGIFFGDLEGNHVLSLPILVIVFLLFTNIRTTIFVSLYSFFLMYIFLYRMYGSGGLKTSFVVDSVLGFLFFTLMSVLTV
NLLNLYIKEKDELIKEIHHRVRNNLQVLCGLADLHKNDWSDSKKVLIKFQNRILAMSEVHNYLYKSDNYHKIEFSEVIER
IVADMKNKNDDFKVNVLNHSERIELPIEIAIPCAMIFNELLNNSFMHAFKETKDPNIEILFSKTGENCNLTIKDNGTGIP
LPIDMKKQKTTGFTLVHILSKQIRANVEFFNDNGLVAVLKF

Sequences:

>Translated_361_residues
MYAEENFLVRVRAIYLFTFNAIAFVFAGITFSVFVYEGELTYRPSFILLITASGISIALILSGRFRWAVWITLASVLLGI
SLGIFFGDLEGNHVLSLPILVIVFLLFTNIRTTIFVSLYSFFLMYIFLYRMYGSGGLKTSFVVDSVLGFLFFTLMSVLTV
NLLNLYIKEKDELIKEIHHRVRNNLQVLCGLADLHKNDWSDSKKVLIKFQNRILAMSEVHNYLYKSDNYHKIEFSEVIER
IVADMKNKNDDFKVNVLNHSERIELPIEIAIPCAMIFNELLNNSFMHAFKETKDPNIEILFSKTGENCNLTIKDNGTGIP
LPIDMKKQKTTGFTLVHILSKQIRANVEFFNDNGLVAVLKF
>Mature_361_residues
MYAEENFLVRVRAIYLFTFNAIAFVFAGITFSVFVYEGELTYRPSFILLITASGISIALILSGRFRWAVWITLASVLLGI
SLGIFFGDLEGNHVLSLPILVIVFLLFTNIRTTIFVSLYSFFLMYIFLYRMYGSGGLKTSFVVDSVLGFLFFTLMSVLTV
NLLNLYIKEKDELIKEIHHRVRNNLQVLCGLADLHKNDWSDSKKVLIKFQNRILAMSEVHNYLYKSDNYHKIEFSEVIER
IVADMKNKNDDFKVNVLNHSERIELPIEIAIPCAMIFNELLNNSFMHAFKETKDPNIEILFSKTGENCNLTIKDNGTGIP
LPIDMKKQKTTGFTLVHILSKQIRANVEFFNDNGLVAVLKF

Specific function: Member of the two-component regulatory system pdtaR/pdtaS. Autophosphorylates, probably on a histidine residue, and transfers its phosphate group to pdtaR [H]

COG id: COG3920

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR022066
- InterPro:   IPR011495
- InterPro:   IPR005467 [H]

Pfam domain/function: PF12282 H_kinase_N; PF02518 HATPase_c; PF07568 HisKA_2 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 41398; Mature: 41398

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYAEENFLVRVRAIYLFTFNAIAFVFAGITFSVFVYEGELTYRPSFILLITASGISIALI
CCCCCCCEEEEEHHHHHHHHHHHHHHHHHEEEEEEEECEEEECCEEEEEEEECCCEEEEE
LSGRFRWAVWITLASVLLGISLGIFFGDLEGNHVLSLPILVIVFLLFTNIRTTIFVSLYS
EECCCHHHHHHHHHHHHHHHHHHHEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
FFLMYIFLYRMYGSGGLKTSFVVDSVLGFLFFTLMSVLTVNLLNLYIKEKDELIKEIHHR
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRNNLQVLCGLADLHKNDWSDSKKVLIKFQNRILAMSEVHNYLYKSDNYHKIEFSEVIER
HHCCHHEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHH
IVADMKNKNDDFKVNVLNHSERIELPIEIAIPCAMIFNELLNNSFMHAFKETKDPNIEIL
HHHHHCCCCCCEEEEEECCCCEEEEEEEEEHHHHHHHHHHHCHHHHHHHHHCCCCCEEEE
FSKTGENCNLTIKDNGTGIPLPIDMKKQKTTGFTLVHILSKQIRANVEFFNDNGLVAVLK
EECCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCEEEEEE
F
C
>Mature Secondary Structure
MYAEENFLVRVRAIYLFTFNAIAFVFAGITFSVFVYEGELTYRPSFILLITASGISIALI
CCCCCCCEEEEEHHHHHHHHHHHHHHHHHEEEEEEEECEEEECCEEEEEEEECCCEEEEE
LSGRFRWAVWITLASVLLGISLGIFFGDLEGNHVLSLPILVIVFLLFTNIRTTIFVSLYS
EECCCHHHHHHHHHHHHHHHHHHHEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
FFLMYIFLYRMYGSGGLKTSFVVDSVLGFLFFTLMSVLTVNLLNLYIKEKDELIKEIHHR
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRNNLQVLCGLADLHKNDWSDSKKVLIKFQNRILAMSEVHNYLYKSDNYHKIEFSEVIER
HHCCHHEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHH
IVADMKNKNDDFKVNVLNHSERIELPIEIAIPCAMIFNELLNNSFMHAFKETKDPNIEIL
HHHHHCCCCCCEEEEEECCCCEEEEEEEEEHHHHHHHHHHHCHHHHHHHHHCCCCCEEEE
FSKTGENCNLTIKDNGTGIPLPIDMKKQKTTGFTLVHILSKQIRANVEFFNDNGLVAVLK
EECCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCEEEEEE
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]