Click here to switch to the map view.

The map label for this gene is ybcI [H]

Identifier: 116327732

GI number: 116327732

Start: 1150149

End: 1150694

Strand: Reverse

Name: ybcI [H]

Synonym: LBL_0986

Alternate gene names: 116327732

Gene position: 1150694-1150149 (Counterclockwise)

Preceding gene: 116327734

Following gene: 116327731

Centisome position: 31.84

GC content: 45.42

Gene sequence:

>546_bases
ATGCCCACCATAATGACTCATACAGCGATTCCGATCTCCTTTTGGATCGCGTTTGGAAATAAATTCATTCCCACCCGACT
CCTGATAATCGGAATTCTTTTTTCGATTCTTCCCGATGTGGACGTGATCGCGTTCCAATTCGGGATCCCTTATGAAAGCG
ACTGGGGACATCGAGGATTCAGCCATTCGATTTTGTTCTCATTCTCTCTAAGCGTTTTAGCCTGCGTTTTAGTTCGATGG
CTTCGCGCGAGAATAGAAGCCGTGTTTTTCTTTTTGTTTCTTTCGATTCTTTCTCACGGAGTTCTGGACGCGACGACCGG
CAGAGGACTCGGAGTGGGATTTCTCATCCCCTATTCATCCGAAAGATTTTTCTTTACGTCGAGGCCAATCGCCGTTTCAC
CCATCGGAATCAAAAATTTTTTGACATCGAGAGGCCTGGTAGTTCTGAGATCGGAACTTTTCACGGTATGGATTCCGTTG
TTATCGATCGCAGTTTCGATTTTTTTAATACGAACTCGGAGGATCGATGCGCGTATCAAGGATTAA

Upstream 100 bases:

>100_bases
GCACGGATTGCTCCCGATATAGGTCGCAACGCAGGTCAACGTCTTCTAAACAAGGTGTAAAGTCCTAACCACCGATTCCC
GATCATTTGCCGCTTAAAAC

Downstream 100 bases:

>100_bases
AAAATCGGAATCCACTTTGCCGACATTCCGAAAAACTCACGGGTAGCGAGCAAACAATCCTCTGAAAAATCAATATTAGA
GTCGTTGAAAAATTAATTCT

Product: membrane-bound metal-dependent hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MPTIMTHTAIPISFWIAFGNKFIPTRLLIIGILFSILPDVDVIAFQFGIPYESDWGHRGFSHSILFSFSLSVLACVLVRW
LRARIEAVFFFLFLSILSHGVLDATTGRGLGVGFLIPYSSERFFFTSRPIAVSPIGIKNFLTSRGLVVLRSELFTVWIPL
LSIAVSIFLIRTRRIDARIKD

Sequences:

>Translated_181_residues
MPTIMTHTAIPISFWIAFGNKFIPTRLLIIGILFSILPDVDVIAFQFGIPYESDWGHRGFSHSILFSFSLSVLACVLVRW
LRARIEAVFFFLFLSILSHGVLDATTGRGLGVGFLIPYSSERFFFTSRPIAVSPIGIKNFLTSRGLVVLRSELFTVWIPL
LSIAVSIFLIRTRRIDARIKD
>Mature_180_residues
PTIMTHTAIPISFWIAFGNKFIPTRLLIIGILFSILPDVDVIAFQFGIPYESDWGHRGFSHSILFSFSLSVLACVLVRWL
RARIEAVFFFLFLSILSHGVLDATTGRGLGVGFLIPYSSERFFFTSRPIAVSPIGIKNFLTSRGLVVLRSELFTVWIPLL
SIAVSIFLIRTRRIDARIKD

Specific function: Unknown

COG id: COG1988

COG function: function code R; Predicted membrane-bound metal-dependent hydrolases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786738, Length=161, Percent_Identity=45.3416149068323, Blast_Score=127, Evalue=4e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007404 [H]

Pfam domain/function: PF04307 DUF457 [H]

EC number: NA

Molecular weight: Translated: 20424; Mature: 20292

Theoretical pI: Translated: 11.30; Mature: 11.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTIMTHTAIPISFWIAFGNKFIPTRLLIIGILFSILPDVDVIAFQFGIPYESDWGHRGF
CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC
SHSILFSFSLSVLACVLVRWLRARIEAVFFFLFLSILSHGVLDATTGRGLGVGFLIPYSS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCEEEEEECCC
ERFFFTSRPIAVSPIGIKNFLTSRGLVVLRSELFTVWIPLLSIAVSIFLIRTRRIDARIK
CEEEEECCCEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
D
C
>Mature Secondary Structure 
PTIMTHTAIPISFWIAFGNKFIPTRLLIIGILFSILPDVDVIAFQFGIPYESDWGHRGF
CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC
SHSILFSFSLSVLACVLVRWLRARIEAVFFFLFLSILSHGVLDATTGRGLGVGFLIPYSS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCEEEEEECCC
ERFFFTSRPIAVSPIGIKNFLTSRGLVVLRSELFTVWIPLLSIAVSIFLIRTRRIDARIK
CEEEEECCCEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 7567469 [H]