| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327727
Identifier: 116327727
GI number: 116327727
Start: 1143688
End: 1144125
Strand: Reverse
Name: 116327727
Synonym: LBL_0980
Alternate gene names: NA
Gene position: 1144125-1143688 (Counterclockwise)
Preceding gene: 116327728
Following gene: 116327726
Centisome position: 31.65
GC content: 39.04
Gene sequence:
>438_bases ATGAAATTTTCCCTTTCCATTCTTTTATCCACTTCGATTTTATTCCAAGCCATCGTTTTTTCCAGCGGCCTATTCGGTTG TATTCTCGTAGAAAAGGCAAAAATCTGCGAATGCAACCACGGAAGCAAAATGCAGAAACACTCGAACGAAGAAGACAAAA ACTTCTCCAAAAAGGTCCTCTCAGAAAATCGATCCGTCGTTTCTAAAACACTTCCGAATTGTCATTCCGCAAAATCGGGA GAAGTTCACGTTTGTTCCTGCAAAAAAACGGAAAACAAACTTTCTCAATTGAGCGCGTTTTACTCGATCCTTTTTTCTCA AAAACAAGGGAGCGATATCGAGCACCACTTCGACTTCATTCAAATCATTATTTTAGAATATTCTAATTCCGGAATTCTAT CTTTTTTCTCTCCGCTAAAACCCCCTCGATCCTCTTAA
Upstream 100 bases:
>100_bases AATTTATTTCCGAATTGAAAAAAGATCAAATTCAAATTTCGGAAGTAAAACTGAGCGAAGGTTTACAACTCGTTTTTTCC AGACTCAAGATCGACTTAGG
Downstream 100 bases:
>100_bases CGCGCGCAGATACGAGCTTTCAGGAGTTTGCGGAGCCGATCCGCGTTTTTTCGAAAGTTCGTAGTTTCGAAACGATTGTT TCTTTTCGTTCGCGGCGGTG
Product: lipoprotein
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MKFSLSILLSTSILFQAIVFSSGLFGCILVEKAKICECNHGSKMQKHSNEEDKNFSKKVLSENRSVVSKTLPNCHSAKSG EVHVCSCKKTENKLSQLSAFYSILFSQKQGSDIEHHFDFIQIIILEYSNSGILSFFSPLKPPRSS
Sequences:
>Translated_145_residues MKFSLSILLSTSILFQAIVFSSGLFGCILVEKAKICECNHGSKMQKHSNEEDKNFSKKVLSENRSVVSKTLPNCHSAKSG EVHVCSCKKTENKLSQLSAFYSILFSQKQGSDIEHHFDFIQIIILEYSNSGILSFFSPLKPPRSS >Mature_145_residues MKFSLSILLSTSILFQAIVFSSGLFGCILVEKAKICECNHGSKMQKHSNEEDKNFSKKVLSENRSVVSKTLPNCHSAKSG EVHVCSCKKTENKLSQLSAFYSILFSQKQGSDIEHHFDFIQIIILEYSNSGILSFFSPLKPPRSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16196; Mature: 16196
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFSLSILLSTSILFQAIVFSSGLFGCILVEKAKICECNHGSKMQKHSNEEDKNFSKKVL CCEEHHHHHHHHHHHHHHHHHCCCCEEHEECCHHHCCCCCCCHHHHCCCCCHHHHHHHHH SENRSVVSKTLPNCHSAKSGEVHVCSCKKTENKLSQLSAFYSILFSQKQGSDIEHHFDFI HCCHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH QIIILEYSNSGILSFFSPLKPPRSS HHEEEEECCCCHHHHHHCCCCCCCC >Mature Secondary Structure MKFSLSILLSTSILFQAIVFSSGLFGCILVEKAKICECNHGSKMQKHSNEEDKNFSKKVL CCEEHHHHHHHHHHHHHHHHHCCCCEEHEECCHHHCCCCCCCHHHHCCCCCHHHHHHHHH SENRSVVSKTLPNCHSAKSGEVHVCSCKKTENKLSQLSAFYSILFSQKQGSDIEHHFDFI HCCHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH QIIILEYSNSGILSFFSPLKPPRSS HHEEEEECCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA