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The map label for this gene is 116327690

Identifier: 116327690

GI number: 116327690

Start: 1082932

End: 1084962

Strand: Reverse

Name: 116327690

Synonym: LBL_0936

Alternate gene names: NA

Gene position: 1084962-1082932 (Counterclockwise)

Preceding gene: 116327691

Following gene: 116327689

Centisome position: 30.02

GC content: 38.7

Gene sequence:

>2031_bases
ATGCATTTTCTTCGACTTTTTATTATTGTAATCTTTATCTCTATTGCATCCTCTTTGAATTCCGACGGACTTCCGAACTT
TTCTATTCAGGAAAAGGAGGCAAAAACACAATTTGCGAGAGGATTCTCTTATTTTAATAACTCACAGTATTCATCCTCAC
GAGAAAGCTTTTTAAAAGCGCTTTCAATTAAGAACGACTTTACATTAGCCCGACTCCTCCTCTCAAACTCATATTATCTC
TCCGGCGACTGGCCTGAGAGTATGTCGGAATTAGAACAAATAGAAGGGATTACAGGTCTCAATCAAATTCAAAAAGCGAG
ATTAGATGCCCTTAGGATCAATTTAGCCGGCGGAAGCCAAGATTTGGCGGTCCGTTATTATTCCTCAATCTTAGGCGATG
ACCTCCGACGTTTCAGATTTCGAAATCCATCCGATGTAGCCGTCGACGATGACGGATTCCTTTATGTTCTTTCTTTTGAC
ACGGCAAACGTAGTAAAGTTTGACCCGAATGGTAACCCGGTGGATAACTTCAAAGGTTCCTTAGGTCGGAATTTATCAGG
TCCCTTATTTTTCTCATTGAGAGGAAATTCAATTTTTGTGACCGATTTTAAAGCTGATAAGATTTATGAGTTCAATACAA
AAGGTGAATACCGCAACCGATTCGGAAATTCAGGAAAAGGAAATGGAGAATTTCATGGGCCAACCGGAATATTCTTCACA
AAAAATGGATATCTCTATGTCTCTGATTCCGGAAATAATCGGCTTCAAAAATTAAAAACAGATGGGACTTTCATTCAAGA
AATCGGGGTGGGAATTCTACGCAACCCGTCCGGACTCAAAGTAAATTCCCAAGGGGAGATTTATGTGGCCGATCGCGGAA
ATTCTAGAATCACCGTATTCGATTCGGAAGGTAATTTTCTCAGAGAAATTACGAATCCAAATATCCTATTATCTCCCCGC
AATCTAACAATTCGAAAAAACGAAATTTATATCTCGGACGAAAAGTCGGGACTCATCATTTACAATACCGTAGACAATTC
TTGGAGATTATTAGATTCCTTTCGAGATTCAAAAAACATAGTACGAAAACTAAACCAACCTTTCTCTTCAACCTTTGATT
ATACCGGGACACAATTCATCGCGGATTTCAATCGACACCGAGTGGAAATTTTCAGCCCCTCCAATCAATTGTCTTCGAAC
ATGGATATCGTATTAGAAAAAGTTTTAAATCAAGAATACCCGGATATTTCCGTATTTCTCCGCATAAGAGATCGATCAGG
ACGAGATATCAAGGCGATACCAAGAAACTCCTTTAAAGTTTATGAATATGGAAATCTTTCCCCATTGATCGGACTTGCAG
ATATGCAACAGTTTAACAATCGGATCTCGGTATCCCTCGTTTATGAAAATACTCCCGAAGTTAAATCTGCTTATCCGATA
TTCGAAAAATCCCTAAGACCTCTTCTAACTTCGCTTAGACAATACGACGGAATAGAAGTTCTTCGTTCCGGTACGGAATT
GATCAAAACTTCCGATTTCAATCATTCAATGTATGAGATTTTTAAAATATTAAGGACATCTCCTAGTGATTCGAGTTCTA
AGACCGGGAAAGCGATTTACAGAGGAATATCCGATTTACTCGGTCGTCTTGGGCCGAGAATCGTTTTGGTATTGATCTCA
GGGAATTCTTATCCGGATTCATTTACCCAGATTTCACCGGAAAAAATTATCCGCTATTCCAAAGCACATTCGATTCCCAT
ATATTTCTTATCGCTTTCGGATACCGGATCTGCAGTTGAAACATATAAGACGATTGCAGCTTCCACCGGAGGAAAATTCA
TTTTAATTCCGGGTGAAGGATTAGAAAAAAACCTTTACAACTCCTTTTTATCTCATAAGGACAGACGTTATATCGTTTCC
TTCAAAAGTAGAATCAACGTGGATAAAAAAGATTTCTATATCCCCTTGATCATAGAAGCGAATTTTAGAAACACATCCGG
CAAAGCTGAAGCAGGATTCTTTACAAAATGA

Upstream 100 bases:

>100_bases
CTAATACTTTCAGTGCAGAGTTATTCCCGAGTCTTTGGTAAAAAATTCTTGAAATTATGTCTCTTTCAATTGCCTATAGA
AGATAGGGACGAAATTAAGA

Downstream 100 bases:

>100_bases
TTCTAAGTTTTTTACAAAGACATTCCCTTGGCGCCTTAGTCCTATTTTTATTCATTAGGCCGATTTCTTCCGAAAATACG
ATTCAAAAAATTCAGGAAGG

Product: NHL repeat-containing protein

Products: NA

Alternate protein names: NHL Repeat-Containing Protein; NHL Repeat Protein; Tripartite Motif-Containing Protein; PA14 Domain-Containing Protein; Tetratricopeptide Repeat Family Protein; ABC Transporter Related Protein; Ring Finger; Tetratricopeptide Repeat-Containing Protein; SMP-30/Gluconolaconase/LRE Domain Protein; Serine/Threonine Protein Kinase; PKD Domain Containing Protein; Cell Surface Protein; NHL/RHS/YD Repeat-Containing Protein; Surface Layer Protein

Number of amino acids: Translated: 676; Mature: 676

Protein sequence:

>676_residues
MHFLRLFIIVIFISIASSLNSDGLPNFSIQEKEAKTQFARGFSYFNNSQYSSSRESFLKALSIKNDFTLARLLLSNSYYL
SGDWPESMSELEQIEGITGLNQIQKARLDALRINLAGGSQDLAVRYYSSILGDDLRRFRFRNPSDVAVDDDGFLYVLSFD
TANVVKFDPNGNPVDNFKGSLGRNLSGPLFFSLRGNSIFVTDFKADKIYEFNTKGEYRNRFGNSGKGNGEFHGPTGIFFT
KNGYLYVSDSGNNRLQKLKTDGTFIQEIGVGILRNPSGLKVNSQGEIYVADRGNSRITVFDSEGNFLREITNPNILLSPR
NLTIRKNEIYISDEKSGLIIYNTVDNSWRLLDSFRDSKNIVRKLNQPFSSTFDYTGTQFIADFNRHRVEIFSPSNQLSSN
MDIVLEKVLNQEYPDISVFLRIRDRSGRDIKAIPRNSFKVYEYGNLSPLIGLADMQQFNNRISVSLVYENTPEVKSAYPI
FEKSLRPLLTSLRQYDGIEVLRSGTELIKTSDFNHSMYEIFKILRTSPSDSSSKTGKAIYRGISDLLGRLGPRIVLVLIS
GNSYPDSFTQISPEKIIRYSKAHSIPIYFLSLSDTGSAVETYKTIAASTGGKFILIPGEGLEKNLYNSFLSHKDRRYIVS
FKSRINVDKKDFYIPLIIEANFRNTSGKAEAGFFTK

Sequences:

>Translated_676_residues
MHFLRLFIIVIFISIASSLNSDGLPNFSIQEKEAKTQFARGFSYFNNSQYSSSRESFLKALSIKNDFTLARLLLSNSYYL
SGDWPESMSELEQIEGITGLNQIQKARLDALRINLAGGSQDLAVRYYSSILGDDLRRFRFRNPSDVAVDDDGFLYVLSFD
TANVVKFDPNGNPVDNFKGSLGRNLSGPLFFSLRGNSIFVTDFKADKIYEFNTKGEYRNRFGNSGKGNGEFHGPTGIFFT
KNGYLYVSDSGNNRLQKLKTDGTFIQEIGVGILRNPSGLKVNSQGEIYVADRGNSRITVFDSEGNFLREITNPNILLSPR
NLTIRKNEIYISDEKSGLIIYNTVDNSWRLLDSFRDSKNIVRKLNQPFSSTFDYTGTQFIADFNRHRVEIFSPSNQLSSN
MDIVLEKVLNQEYPDISVFLRIRDRSGRDIKAIPRNSFKVYEYGNLSPLIGLADMQQFNNRISVSLVYENTPEVKSAYPI
FEKSLRPLLTSLRQYDGIEVLRSGTELIKTSDFNHSMYEIFKILRTSPSDSSSKTGKAIYRGISDLLGRLGPRIVLVLIS
GNSYPDSFTQISPEKIIRYSKAHSIPIYFLSLSDTGSAVETYKTIAASTGGKFILIPGEGLEKNLYNSFLSHKDRRYIVS
FKSRINVDKKDFYIPLIIEANFRNTSGKAEAGFFTK
>Mature_676_residues
MHFLRLFIIVIFISIASSLNSDGLPNFSIQEKEAKTQFARGFSYFNNSQYSSSRESFLKALSIKNDFTLARLLLSNSYYL
SGDWPESMSELEQIEGITGLNQIQKARLDALRINLAGGSQDLAVRYYSSILGDDLRRFRFRNPSDVAVDDDGFLYVLSFD
TANVVKFDPNGNPVDNFKGSLGRNLSGPLFFSLRGNSIFVTDFKADKIYEFNTKGEYRNRFGNSGKGNGEFHGPTGIFFT
KNGYLYVSDSGNNRLQKLKTDGTFIQEIGVGILRNPSGLKVNSQGEIYVADRGNSRITVFDSEGNFLREITNPNILLSPR
NLTIRKNEIYISDEKSGLIIYNTVDNSWRLLDSFRDSKNIVRKLNQPFSSTFDYTGTQFIADFNRHRVEIFSPSNQLSSN
MDIVLEKVLNQEYPDISVFLRIRDRSGRDIKAIPRNSFKVYEYGNLSPLIGLADMQQFNNRISVSLVYENTPEVKSAYPI
FEKSLRPLLTSLRQYDGIEVLRSGTELIKTSDFNHSMYEIFKILRTSPSDSSSKTGKAIYRGISDLLGRLGPRIVLVLIS
GNSYPDSFTQISPEKIIRYSKAHSIPIYFLSLSDTGSAVETYKTIAASTGGKFILIPGEGLEKNLYNSFLSHKDRRYIVS
FKSRINVDKKDFYIPLIIEANFRNTSGKAEAGFFTK

Specific function: Unknown

COG id: COG3391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32454739, Length=161, Percent_Identity=37.2670807453416, Blast_Score=109, Evalue=8e-24,
Organism=Homo sapiens, GI32454737, Length=161, Percent_Identity=37.2670807453416, Blast_Score=109, Evalue=8e-24,
Organism=Homo sapiens, GI194248081, Length=167, Percent_Identity=35.9281437125749, Blast_Score=108, Evalue=2e-23,
Organism=Homo sapiens, GI194248079, Length=167, Percent_Identity=35.9281437125749, Blast_Score=108, Evalue=2e-23,
Organism=Homo sapiens, GI84993742, Length=171, Percent_Identity=31.5789473684211, Blast_Score=85, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17553622, Length=171, Percent_Identity=35.0877192982456, Blast_Score=92, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71980713, Length=185, Percent_Identity=32.4324324324324, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71980716, Length=185, Percent_Identity=32.4324324324324, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17554338, Length=145, Percent_Identity=29.6551724137931, Blast_Score=70, Evalue=5e-12,
Organism=Drosophila melanogaster, GI221330419, Length=171, Percent_Identity=32.7485380116959, Blast_Score=86, Evalue=6e-17,
Organism=Drosophila melanogaster, GI24655386, Length=171, Percent_Identity=32.7485380116959, Blast_Score=86, Evalue=8e-17,
Organism=Drosophila melanogaster, GI22024206, Length=171, Percent_Identity=32.7485380116959, Blast_Score=86, Evalue=8e-17,
Organism=Drosophila melanogaster, GI221330033, Length=258, Percent_Identity=28.6821705426357, Blast_Score=82, Evalue=2e-15,
Organism=Drosophila melanogaster, GI221330031, Length=258, Percent_Identity=28.6821705426357, Blast_Score=82, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24586266, Length=258, Percent_Identity=28.6821705426357, Blast_Score=82, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24586264, Length=258, Percent_Identity=28.6821705426357, Blast_Score=82, Evalue=2e-15,
Organism=Drosophila melanogaster, GI22026822, Length=258, Percent_Identity=28.6821705426357, Blast_Score=82, Evalue=2e-15,
Organism=Drosophila melanogaster, GI45552407, Length=259, Percent_Identity=25.4826254826255, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI19549884, Length=259, Percent_Identity=25.4826254826255, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI17136846, Length=259, Percent_Identity=25.4826254826255, Blast_Score=70, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76435; Mature: 76435

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS51125 NHL L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFLRLFIIVIFISIASSLNSDGLPNFSIQEKEAKTQFARGFSYFNNSQYSSSRESFLKA
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LSIKNDFTLARLLLSNSYYLSGDWPESMSELEQIEGITGLNQIQKARLDALRINLAGGSQ
HHCCCCHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCCHHHHHHHHEEEEEEEECCCCC
DLAVRYYSSILGDDLRRFRFRNPSDVAVDDDGFLYVLSFDTANVVKFDPNGNPVDNFKGS
HHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEEECCCEEEEECCCCCCCCCCCHH
LGRNLSGPLFFSLRGNSIFVTDFKADKIYEFNTKGEYRNRFGNSGKGNGEFHGPTGIFFT
CCCCCCCCEEEEEECCEEEEEECCCCCEEEECCCCHHHHHCCCCCCCCCEECCCEEEEEE
KNGYLYVSDSGNNRLQKLKTDGTFIQEIGVGILRNPSGLKVNSQGEIYVADRGNSRITVF
CCCEEEEECCCCCCHHEEECCCCCHHHCCCCEEECCCCCEECCCCCEEEEECCCCEEEEE
DSEGNFLREITNPNILLSPRNLTIRKNEIYISDEKSGLIIYNTVDNSWRLLDSFRDSKNI
ECCCCEEHHCCCCCEEEECCCEEEEECEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHH
VRKLNQPFSSTFDYTGTQFIADFNRHRVEIFSPSNQLSSNMDIVLEKVLNQEYPDISVFL
HHHHCCCHHCCCCCCCHHHHCCCCCCEEEEECCCHHHCCCHHHHHHHHHCCCCCCEEEEE
RIRDRSGRDIKAIPRNSFKVYEYGNLSPLIGLADMQQFNNRISVSLVYENTPEVKSAYPI
EEECCCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHCCEEEEEEEECCCCCCHHCCHH
FEKSLRPLLTSLRQYDGIEVLRSGTELIKTSDFNHSMYEIFKILRTSPSDSSSKTGKAIY
HHHHHHHHHHHHHHCCCHHHHHCCCHHEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHH
RGISDLLGRLGPRIVLVLISGNSYPDSFTQISPEKIIRYSKAHSIPIYFLSLSDTGSAVE
HHHHHHHHCCCCEEEEEEEECCCCCCHHHCCCHHHHHHHHCCCCCEEEEEEECCCCCHHH
TYKTIAASTGGKFILIPGEGLEKNLYNSFLSHKDRRYIVSFKSRINVDKKDFYIPLIIEA
HHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEEHHHCCCCCHHEEEEEEEEE
NFRNTSGKAEAGFFTK
CCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHFLRLFIIVIFISIASSLNSDGLPNFSIQEKEAKTQFARGFSYFNNSQYSSSRESFLKA
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LSIKNDFTLARLLLSNSYYLSGDWPESMSELEQIEGITGLNQIQKARLDALRINLAGGSQ
HHCCCCHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCCHHHHHHHHEEEEEEEECCCCC
DLAVRYYSSILGDDLRRFRFRNPSDVAVDDDGFLYVLSFDTANVVKFDPNGNPVDNFKGS
HHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEEECCCEEEEECCCCCCCCCCCHH
LGRNLSGPLFFSLRGNSIFVTDFKADKIYEFNTKGEYRNRFGNSGKGNGEFHGPTGIFFT
CCCCCCCCEEEEEECCEEEEEECCCCCEEEECCCCHHHHHCCCCCCCCCEECCCEEEEEE
KNGYLYVSDSGNNRLQKLKTDGTFIQEIGVGILRNPSGLKVNSQGEIYVADRGNSRITVF
CCCEEEEECCCCCCHHEEECCCCCHHHCCCCEEECCCCCEECCCCCEEEEECCCCEEEEE
DSEGNFLREITNPNILLSPRNLTIRKNEIYISDEKSGLIIYNTVDNSWRLLDSFRDSKNI
ECCCCEEHHCCCCCEEEECCCEEEEECEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHH
VRKLNQPFSSTFDYTGTQFIADFNRHRVEIFSPSNQLSSNMDIVLEKVLNQEYPDISVFL
HHHHCCCHHCCCCCCCHHHHCCCCCCEEEEECCCHHHCCCHHHHHHHHHCCCCCCEEEEE
RIRDRSGRDIKAIPRNSFKVYEYGNLSPLIGLADMQQFNNRISVSLVYENTPEVKSAYPI
EEECCCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHCCEEEEEEEECCCCCCHHCCHH
FEKSLRPLLTSLRQYDGIEVLRSGTELIKTSDFNHSMYEIFKILRTSPSDSSSKTGKAIY
HHHHHHHHHHHHHHCCCHHHHHCCCHHEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHH
RGISDLLGRLGPRIVLVLISGNSYPDSFTQISPEKIIRYSKAHSIPIYFLSLSDTGSAVE
HHHHHHHHCCCCEEEEEEEECCCCCCHHHCCCHHHHHHHHCCCCCEEEEEEECCCCCHHH
TYKTIAASTGGKFILIPGEGLEKNLYNSFLSHKDRRYIVSFKSRINVDKKDFYIPLIIEA
HHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEEHHHCCCCCHHEEEEEEEEE
NFRNTSGKAEAGFFTK
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA