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The map label for this gene is 116327687

Identifier: 116327687

GI number: 116327687

Start: 1078608

End: 1079078

Strand: Direct

Name: 116327687

Synonym: LBL_0933

Alternate gene names: NA

Gene position: 1078608-1079078 (Clockwise)

Preceding gene: 116327686

Following gene: 116327692

Centisome position: 29.84

GC content: 39.92

Gene sequence:

>471_bases
TTGGAAAACATTACTCCTTCAGATTTTTTAGAAGCGGCGAAATATTTTTATAAAAAAGGCGATTCGGACAGAGCAGAGTA
TTTGTTCAAACTTACTTTGGAGGGCGAGGAGAACCACGAGGCTTATTTCTTTTTGGGGCTTCTCGAAAATCAGAGGGGAA
ATTCGGAAAAAGGGCTTACACATTTTTATAAATCTGTGGAATTGAATCCGAATTACGGAAACCCCTGCAATGAAATCGGA
ATCATACTTTTAAGAGCGGGAAAGGAAATCGAGGCGGTGTATTGGCTTAAAAAATCCTTACGCTGTGAATTAAACGATGC
GCCTCACATTTCACTCTACAATCTTGCCACTCTGTATAAAATTTGGAATCGTCCCGAAAGATCCCTTCAGTATTTACATC
GTGCTATATTAATCAAACCCGATTTCGAAGAGGCCAGAAAGCTCAAAGAGGAGTTAGGTTCCGCAATTTGA

Upstream 100 bases:

>100_bases
GGGCATCGATCGCGGAGAGTGTAGCGGATGTATTGAAAAAAAACTTAATCAAGCCGTGACCATTCCAAACCGAAAATAAA
AATAAAAACGGGTTAAGGAA

Downstream 100 bases:

>100_bases
GTTAAAGAAAATAGGGAACAATTTTGAATCTCTGGCGGTAAACTGGAATTTTATAGGAACTAGAAGCTATCTCAAAAATA
CTTTATCTTTGCTTAAAATG

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: TPR-Repeat-Containing Protein

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MENITPSDFLEAAKYFYKKGDSDRAEYLFKLTLEGEENHEAYFFLGLLENQRGNSEKGLTHFYKSVELNPNYGNPCNEIG
IILLRAGKEIEAVYWLKKSLRCELNDAPHISLYNLATLYKIWNRPERSLQYLHRAILIKPDFEEARKLKEELGSAI

Sequences:

>Translated_156_residues
MENITPSDFLEAAKYFYKKGDSDRAEYLFKLTLEGEENHEAYFFLGLLENQRGNSEKGLTHFYKSVELNPNYGNPCNEIG
IILLRAGKEIEAVYWLKKSLRCELNDAPHISLYNLATLYKIWNRPERSLQYLHRAILIKPDFEEARKLKEELGSAI
>Mature_156_residues
MENITPSDFLEAAKYFYKKGDSDRAEYLFKLTLEGEENHEAYFFLGLLENQRGNSEKGLTHFYKSVELNPNYGNPCNEIG
IILLRAGKEIEAVYWLKKSLRCELNDAPHISLYNLATLYKIWNRPERSLQYLHRAILIKPDFEEARKLKEELGSAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18193; Mature: 18193

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENITPSDFLEAAKYFYKKGDSDRAEYLFKLTLEGEENHEAYFFLGLLENQRGNSEKGLT
CCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEEEEEEEECCCCCCCHHHH
HFYKSVELNPNYGNPCNEIGIILLRAGKEIEAVYWLKKSLRCELNDAPHISLYNLATLYK
HHHHHEEECCCCCCCHHHHCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
IWNRPERSLQYLHRAILIKPDFEEARKLKEELGSAI
HHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MENITPSDFLEAAKYFYKKGDSDRAEYLFKLTLEGEENHEAYFFLGLLENQRGNSEKGLT
CCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEEEEEEEECCCCCCCHHHH
HFYKSVELNPNYGNPCNEIGIILLRAGKEIEAVYWLKKSLRCELNDAPHISLYNLATLYK
HHHHHEEECCCCCCCHHHHCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
IWNRPERSLQYLHRAILIKPDFEEARKLKEELGSAI
HHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA