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The map label for this gene is tsf

Identifier: 116327674

GI number: 116327674

Start: 1063484

End: 1064083

Strand: Direct

Name: tsf

Synonym: LBL_0920

Alternate gene names: 116327674

Gene position: 1063484-1064083 (Clockwise)

Preceding gene: 116327673

Following gene: 116327675

Centisome position: 29.42

GC content: 43.17

Gene sequence:

>600_bases
ATGGCAGCTGTTACTACGGATTTAATTAGAGAACTCAGAGAGAGAACCAGTGCGGGAATGATGGACTGTAAAAAGGCTCT
TGAGGAAAACAATGCGGATATTGAAAAAGCGATCACCTGGCTTCGTGAAAAAGGGATTGCGAAAGCCGCTAAAAAAGCGG
GAAGAGAAACCAAAGAAGGAAGAATCGTCTCCTACATTCATGGTAACGGAAAGATCGGGGTTCTCTTAGAATTGAATTCC
GAAACCGACTTCGTTTCCAAAAACGAGGAGTTTGAAGCGCTGGGAAAAGAAATCTGTATGCAGATTGCTGCGATGAATCC
TTTGTATCTAAACGAGGAATCTATTCCCGCAGCGGATCTTGAAAGAGAGAAAGGAATCATGAAGTCTCAGCTCGAAGCGG
AAGGCAAAAAAGCGGAACAAATCGAAAAGATTCTTCCCGGAAAAATCAAAAAATATGTTTCCGAAGTTTGTCTTGTAAAC
CAGGCATTTTTTAAGGACGATTCCAAAACCATAGACGATTTGGTAAAGGAAGCGATCGCGAAATTCGGCGAGAACATCAC
GATCGCCCATTTTGTCCGCTTTCAGGTGGGTGGACTCTAA

Upstream 100 bases:

>100_bases
TCTAAAAAATCCAAAGCGGAAGAGCCTGTTATCCCTACAGCGGAAGAGCCCGCTATCACTACGATCGAAGTGGATCAAAA
CGAATAAAGGATTTTTGGCA

Downstream 100 bases:

>100_bases
ATTTTGGGATCAAAGTATAAGAGAATTCTGATCAAACTTTCCGGGGAAGCACTTGCCGGAGAGGGAGAATTCGGGATCGA
TACCAATAAGGCTCATTCTC

Product: elongation factor Ts

Products: NA

Alternate protein names: EF-Ts

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MAAVTTDLIRELRERTSAGMMDCKKALEENNADIEKAITWLREKGIAKAAKKAGRETKEGRIVSYIHGNGKIGVLLELNS
ETDFVSKNEEFEALGKEICMQIAAMNPLYLNEESIPAADLEREKGIMKSQLEAEGKKAEQIEKILPGKIKKYVSEVCLVN
QAFFKDDSKTIDDLVKEAIAKFGENITIAHFVRFQVGGL

Sequences:

>Translated_199_residues
MAAVTTDLIRELRERTSAGMMDCKKALEENNADIEKAITWLREKGIAKAAKKAGRETKEGRIVSYIHGNGKIGVLLELNS
ETDFVSKNEEFEALGKEICMQIAAMNPLYLNEESIPAADLEREKGIMKSQLEAEGKKAEQIEKILPGKIKKYVSEVCLVN
QAFFKDDSKTIDDLVKEAIAKFGENITIAHFVRFQVGGL
>Mature_198_residues
AAVTTDLIRELRERTSAGMMDCKKALEENNADIEKAITWLREKGIAKAAKKAGRETKEGRIVSYIHGNGKIGVLLELNSE
TDFVSKNEEFEALGKEICMQIAAMNPLYLNEESIPAADLEREKGIMKSQLEAEGKKAEQIEKILPGKIKKYVSEVCLVNQ
AFFKDDSKTIDDLVKEAIAKFGENITIAHFVRFQVGGL

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family

Homologues:

Organism=Homo sapiens, GI291084500, Length=202, Percent_Identity=29.7029702970297, Blast_Score=77, Evalue=8e-15,
Organism=Homo sapiens, GI171846268, Length=159, Percent_Identity=36.4779874213836, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI291084502, Length=148, Percent_Identity=36.4864864864865, Blast_Score=75, Evalue=3e-14,
Organism=Homo sapiens, GI291084498, Length=103, Percent_Identity=40.7766990291262, Blast_Score=74, Evalue=7e-14,
Organism=Escherichia coli, GI1786366, Length=98, Percent_Identity=53.0612244897959, Blast_Score=100, Evalue=6e-23,
Organism=Drosophila melanogaster, GI19921466, Length=101, Percent_Identity=39.6039603960396, Blast_Score=67, Evalue=9e-12,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): EFTS_LEPBJ (Q04U71)

Other databases:

- EMBL:   CP000350
- RefSeq:   YP_800307.1
- ProteinModelPortal:   Q04U71
- SMR:   Q04U71
- STRING:   Q04U71
- GeneID:   4409801
- GenomeReviews:   CP000350_GR
- KEGG:   lbj:LBJ_0905
- eggNOG:   COG0264
- HOGENOM:   HBG713289
- OMA:   NVEYVSI
- ProtClustDB:   PRK12332
- BioCyc:   LBOR355277:LBJ_0905-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00050
- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449
- Gene3D:   G3DSA:3.30.479.20
- PANTHER:   PTHR11741
- TIGRFAMs:   TIGR00116

Pfam domain/function: PF00889 EF_TS; PF00627 UBA; SSF54713 EF_TS; SSF46934 UBA_like

EC number: NA

Molecular weight: Translated: 22151; Mature: 22020

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: PS01126 EF_TS_1; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAVTTDLIRELRERTSAGMMDCKKALEENNADIEKAITWLREKGIAKAAKKAGRETKEG
CCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
RIVSYIHGNGKIGVLLELNSETDFVSKNEEFEALGKEICMQIAAMNPLYLNEESIPAADL
CEEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHH
EREKGIMKSQLEAEGKKAEQIEKILPGKIKKYVSEVCLVNQAFFKDDSKTIDDLVKEAIA
HHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
KFGENITIAHFVRFQVGGL
HHCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
AAVTTDLIRELRERTSAGMMDCKKALEENNADIEKAITWLREKGIAKAAKKAGRETKEG
CCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
RIVSYIHGNGKIGVLLELNSETDFVSKNEEFEALGKEICMQIAAMNPLYLNEESIPAADL
CEEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHH
EREKGIMKSQLEAEGKKAEQIEKILPGKIKKYVSEVCLVNQAFFKDDSKTIDDLVKEAIA
HHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
KFGENITIAHFVRFQVGGL
HHCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA