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The map label for this gene is 116327648

Identifier: 116327648

GI number: 116327648

Start: 1038972

End: 1039349

Strand: Reverse

Name: 116327648

Synonym: LBL_0890

Alternate gene names: NA

Gene position: 1039349-1038972 (Counterclockwise)

Preceding gene: 116327649

Following gene: 116327646

Centisome position: 28.76

GC content: 28.04

Gene sequence:

>378_bases
ATGTTAATTGATTCAGACGTTTTGATTGATTATTTGCGAGGGTATGAAAAAGCAATCAATTGGTTTCATTCTCTTGATGA
ATCAGCTTCAATTTCCGGATATTCATATTTTGAATTGATAGAAGGTTGTAAGAATTCGAGGGATTTACAGAAATTAGAAA
AATTTGTATCTGTATTCGAAATACTCTGGTTAAATGAACGAGAAATTCAAAACGCTTTATTGATTTTTAAAAAAACCAAA
TTTAAAAATGGAATGGGTTTTATCGATTGTTTGATTGGACAAACATCGCTCAGATACAAAAAAACTTTATATACTTTCAA
TGTAAAACATTACAAAGGTTTTTCGGGAATTAAGATTTCTAAACCTTATGAAAAGTAA

Upstream 100 bases:

>100_bases
GAGCTTCAGAAGCTAAAATTGGCTGGTATTTGGTCAGACCGAGAAATAACGGACGGGTTAGCGTATTCAAGAGAATTAAG
AAAAAAATTATCTAATCGTA

Downstream 100 bases:

>100_bases
ATTAGGATCAGGTTCTGATATGGCGCCCCATCCGGAGCCGTAAATCTTTTTTCGCATATTTTTTAAATCACCCAATAATT
TAACTCGTTAGAGAAAAGCA

Product: VapC, nucleic acid-binding protein

Products: NA

Alternate protein names: PilT Protein Domain Protein

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MLIDSDVLIDYLRGYEKAINWFHSLDESASISGYSYFELIEGCKNSRDLQKLEKFVSVFEILWLNEREIQNALLIFKKTK
FKNGMGFIDCLIGQTSLRYKKTLYTFNVKHYKGFSGIKISKPYEK

Sequences:

>Translated_125_residues
MLIDSDVLIDYLRGYEKAINWFHSLDESASISGYSYFELIEGCKNSRDLQKLEKFVSVFEILWLNEREIQNALLIFKKTK
FKNGMGFIDCLIGQTSLRYKKTLYTFNVKHYKGFSGIKISKPYEK
>Mature_125_residues
MLIDSDVLIDYLRGYEKAINWFHSLDESASISGYSYFELIEGCKNSRDLQKLEKFVSVFEILWLNEREIQNALLIFKKTK
FKNGMGFIDCLIGQTSLRYKKTLYTFNVKHYKGFSGIKISKPYEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14700; Mature: 14700

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIDSDVLIDYLRGYEKAINWFHSLDESASISGYSYFELIEGCKNSRDLQKLEKFVSVFE
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
ILWLNEREIQNALLIFKKTKFKNGMGFIDCLIGQTSLRYKKTLYTFNVKHYKGFSGIKIS
HHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHEEEECHHHCCCCCCCCC
KPYEK
CCCCC
>Mature Secondary Structure
MLIDSDVLIDYLRGYEKAINWFHSLDESASISGYSYFELIEGCKNSRDLQKLEKFVSVFE
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH
ILWLNEREIQNALLIFKKTKFKNGMGFIDCLIGQTSLRYKKTLYTFNVKHYKGFSGIKIS
HHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHEEEECHHHCCCCCCCCC
KPYEK
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA