Click here to switch to the map view.

The map label for this gene is 116327621

Identifier: 116327621

GI number: 116327621

Start: 990017

End: 990799

Strand: Direct

Name: 116327621

Synonym: LBL_0853

Alternate gene names: NA

Gene position: 990017-990799 (Clockwise)

Preceding gene: 116327620

Following gene: 116327625

Centisome position: 27.39

GC content: 42.02

Gene sequence:

>783_bases
TTGAAGCGGATTATAACCCAAAAAAGAGATGATGAATTTCCAAATTCGGAAAAATCTCGTGCTTACATGGAAGAACGTTC
TGTCACTCATAAAAACGAAAAGCAGTCTCTTAAAAGAAAGTTTTTAATTTGGTTCATTCCGTTCCTTGTAGTCAATCTAC
AGAAACTAATCGGGTTTACTTCTCGAAGAATCAATATCGGAAACGAGAGTATCGAGAAAATCCGCAGAGAAAAAAAACCT
TATATCCTTTCCATTTGGCATACGAATGTTTTATATTCTCCTTATCTCAACCGAAACTTAGGAGTGGTCGTTCTCATTTC
CGAATCCAAAGACGGAGACTTTATCAATCAGGTTGTTCATCGATTCGGCAACTGCAGCGTTCGAGGAAGTTCTTCTAAGG
GAGGTTCCAGAGCTCTCAAAGCGTTGGTTACTCATCTTAAAAAAAATCTTCCTGCGGCGATTACACCCGACGGTCCTAGA
GGCCCGGCATTGGTTGTGCAACCCGGTCTGATCGCTTCCGCTCAGATTTCTCAAGTTCCGATCGTTCCGTTTCATTACGA
ATGTACGCGTCAATGGGTTGCCGAAAGATCCTGGGACAAACATAGAATTCCGAAACCGTTTACCACTTTCGTGGTTTCGT
ACGGAGAGTCGATTTATATCCCTAGGGATTTGGATGAAAAGGGTTTTGAAGAGGCTCGACTGAAAGTGGAAAAAGCGATG
CTCGAAAACCGACAGAGGAGCATCGATAAGGCCGAGGAATTAAGAAAAAGACAATATTCTTAA

Upstream 100 bases:

>100_bases
ATTGGATCGGAATGGGAATCTTTTTTGCAGGTATATTGATTTTATTTCCTAGGGAGAAAGAATTTTCTTCTTTGTATAAA
ACGCGGGAGTTCCCCCTAGA

Downstream 100 bases:

>100_bases
AAGTGAATGTGTTAAAAATTGATCGAGTTTTGAAAGTTAAGTTTCTGTTTGCATACATCCCCGCCTGAAAATATACTTTG
TCAGTGCGCTATGAAGTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MKRIITQKRDDEFPNSEKSRAYMEERSVTHKNEKQSLKRKFLIWFIPFLVVNLQKLIGFTSRRINIGNESIEKIRREKKP
YILSIWHTNVLYSPYLNRNLGVVVLISESKDGDFINQVVHRFGNCSVRGSSSKGGSRALKALVTHLKKNLPAAITPDGPR
GPALVVQPGLIASAQISQVPIVPFHYECTRQWVAERSWDKHRIPKPFTTFVVSYGESIYIPRDLDEKGFEEARLKVEKAM
LENRQRSIDKAEELRKRQYS

Sequences:

>Translated_260_residues
MKRIITQKRDDEFPNSEKSRAYMEERSVTHKNEKQSLKRKFLIWFIPFLVVNLQKLIGFTSRRINIGNESIEKIRREKKP
YILSIWHTNVLYSPYLNRNLGVVVLISESKDGDFINQVVHRFGNCSVRGSSSKGGSRALKALVTHLKKNLPAAITPDGPR
GPALVVQPGLIASAQISQVPIVPFHYECTRQWVAERSWDKHRIPKPFTTFVVSYGESIYIPRDLDEKGFEEARLKVEKAM
LENRQRSIDKAEELRKRQYS
>Mature_260_residues
MKRIITQKRDDEFPNSEKSRAYMEERSVTHKNEKQSLKRKFLIWFIPFLVVNLQKLIGFTSRRINIGNESIEKIRREKKP
YILSIWHTNVLYSPYLNRNLGVVVLISESKDGDFINQVVHRFGNCSVRGSSSKGGSRALKALVTHLKKNLPAAITPDGPR
GPALVVQPGLIASAQISQVPIVPFHYECTRQWVAERSWDKHRIPKPFTTFVVSYGESIYIPRDLDEKGFEEARLKVEKAM
LENRQRSIDKAEELRKRQYS

Specific function: Unknown

COG id: COG2121

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To H.pylori HP0270 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007172
- ProDom:   PD032436 [H]

Pfam domain/function: PF04028 DUF374 [H]

EC number: NA

Molecular weight: Translated: 30093; Mature: 30093

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIITQKRDDEFPNSEKSRAYMEERSVTHKNEKQSLKRKFLIWFIPFLVVNLQKLIGFT
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRRINIGNESIEKIRREKKPYILSIWHTNVLYSPYLNRNLGVVVLISESKDGDFINQVVH
HCEEECCHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCCCEEEEEECCCCCHHHHHHHH
RFGNCSVRGSSSKGGSRALKALVTHLKKNLPAAITPDGPRGPALVVQPGLIASAQISQVP
HHCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEECCCCCCCCCCCCCC
IVPFHYECTRQWVAERSWDKHRIPKPFTTFVVSYGESIYIPRDLDEKGFEEARLKVEKAM
CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHH
LENRQRSIDKAEELRKRQYS
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRIITQKRDDEFPNSEKSRAYMEERSVTHKNEKQSLKRKFLIWFIPFLVVNLQKLIGFT
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRRINIGNESIEKIRREKKPYILSIWHTNVLYSPYLNRNLGVVVLISESKDGDFINQVVH
HCEEECCHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCCCEEEEEECCCCCHHHHHHHH
RFGNCSVRGSSSKGGSRALKALVTHLKKNLPAAITPDGPRGPALVVQPGLIASAQISQVP
HHCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEECCCCCCCCCCCCCC
IVPFHYECTRQWVAERSWDKHRIPKPFTTFVVSYGESIYIPRDLDEKGFEEARLKVEKAM
CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHH
LENRQRSIDKAEELRKRQYS
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]