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The map label for this gene is 116327600

Identifier: 116327600

GI number: 116327600

Start: 962725

End: 964299

Strand: Reverse

Name: 116327600

Synonym: LBL_0832

Alternate gene names: NA

Gene position: 964299-962725 (Counterclockwise)

Preceding gene: 116327601

Following gene: 116327599

Centisome position: 26.68

GC content: 41.71

Gene sequence:

>1575_bases
ATGAAAGACAAAGTCAAAAATTGGAAACAAAGGCTGAAAATTCAAAAGTTATCTCTAACTCTTTTGGGAAATTTTGTTCT
TTTATCCATTCCCCTTTTTGCGGATGATTCCGTCCTGAAACTGACTACCGAAGAAACCGTCAAACGCGCGTTGGAAAGCA
ATTACAATCTGCAAAACCTTCGTTACGAGCTCGCAAAATCGGATACGAACTTTTTGAAAAACGATTCCAAATACTCTTGG
AGATTGGTAGCGGACGGAAGATCCAGTCAGTCCATCCTTCCCTTCAACCAAACGAATATTTTCACAGGAACGAAAATCTC
CGATGATACGATCAAAGGTGGAATCGAAAAGATTCTTCAAACTACCGGAACCTACTTCAAAGTGGAAGCGGGAACCAGAA
GATTCGACTCGAACGCGTTCGAAAATCCGGCGACAACTCCGGCAGGATTCAGCGCTTTAGGCATTCCTCCTCTTTACACA
GGATTTGTAAGAGCGACGATCAGCCAAGACCTACTCAAAAATTCCTTCGGGTATAAGGGAAAAAACGAAGTTAAAATTTT
AGAATCCCAAGCGGAAATCGTGAAAAACCAAGTATCACAACAAATTTCCGCAGTCATCGTGGAATCCCTTGTCGATTTTT
GGGATTATTCGATCAAAACACAAGCCGTCAAAACGTACAAACAACTCGTGGAAAACACGAAAAATATCCGCAATCTTACC
ATTCGTAAACAAAGCCTCGGACTTTCGGAAAGTTTCGAAGTCAATCAGTGGAATGCCCTTTTGGCTCAAGCAGAAAACCA
ATTGGAAACCGCTCAAGTTCAAAAGGAAGAATCAAAACGAAAGCTCGTCCGTTCCCTCAAAATTCCGGACGGGACCTCCC
TTTCCGAAGAGACCAATCTCTTGGAAGAACTGATCGAAAAACCGAATTACATAAAAGATTTAGAATATGCTTATAAACAC
AGAGCCGACTTTTTAAACGCACTCAAACAAAAAGAAATCGCCGAGGCGGCATTGAAAAATGCGAATAACGACCGTCTTCC
TACTTTGACGATTTCAGGAACCGGTGCGAGTCAGGCACAAAATATCATTTCCCCTCAGGAAAACTATATCGATTCCAATC
AAGGGATCACTACCGCAAAGTATAAAGAATGGACCGGGCAGATTAATTTCGCATATCCTCTCGCAGACAAAGGCATTTAT
GCAGGAGTTCGGGACGCAACAATCGGCATGCGCCAGGCAACTCTAAAAGAGGAAGAACTCAAAAACGAGGTGAGAGACGA
CGTAAAGACTAGAATTGAAGCACTCGAAGCAAGTCACAGAATTTATAAGAATAACATTACTACCGAAAGAGAAACCCAAA
ATTACTACAACGGGGTTTTAAGGAGTTTCCGCCAAGGAAGAGCGGATGCAGTTTCGGTAAAGAATGCACTCGATACCCAC
GTTCAAGACCAACTTAGACTAACACAGGCAAAAGTGAATTTCAATATCGATCTTTTACGTTATTATCTCGCTAAGAACGC
ATTACTAGAACATTTTCAAGTGGATCGAGATAAACTTCTTCCACACTTAAATTGA

Upstream 100 bases:

>100_bases
TTGATGAAAGAACATCGGCCCTTTAAATCGTATCTTAACTTGACAACATTTGAGCAACCGGAATTGATTTTTATGGGATT
CGGAAAAAAGGAGGTTTGAA

Downstream 100 bases:

>100_bases
TCGGAGATTGATTGAGAAAGAATTTTTTTGTAATCTTCGGGCTTATATTTGTTTTCATTTTAATTGGTTTTTTCGCCTGG
AAAATTTTGACTCGTAAAAC

Product: TolC-like protein

Products: NA

Alternate protein names: LC-Like Outer Membrane Efflux Protein; Cytoplasmic Membrane Protein

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
MKDKVKNWKQRLKIQKLSLTLLGNFVLLSIPLFADDSVLKLTTEETVKRALESNYNLQNLRYELAKSDTNFLKNDSKYSW
RLVADGRSSQSILPFNQTNIFTGTKISDDTIKGGIEKILQTTGTYFKVEAGTRRFDSNAFENPATTPAGFSALGIPPLYT
GFVRATISQDLLKNSFGYKGKNEVKILESQAEIVKNQVSQQISAVIVESLVDFWDYSIKTQAVKTYKQLVENTKNIRNLT
IRKQSLGLSESFEVNQWNALLAQAENQLETAQVQKEESKRKLVRSLKIPDGTSLSEETNLLEELIEKPNYIKDLEYAYKH
RADFLNALKQKEIAEAALKNANNDRLPTLTISGTGASQAQNIISPQENYIDSNQGITTAKYKEWTGQINFAYPLADKGIY
AGVRDATIGMRQATLKEEELKNEVRDDVKTRIEALEASHRIYKNNITTERETQNYYNGVLRSFRQGRADAVSVKNALDTH
VQDQLRLTQAKVNFNIDLLRYYLAKNALLEHFQVDRDKLLPHLN

Sequences:

>Translated_524_residues
MKDKVKNWKQRLKIQKLSLTLLGNFVLLSIPLFADDSVLKLTTEETVKRALESNYNLQNLRYELAKSDTNFLKNDSKYSW
RLVADGRSSQSILPFNQTNIFTGTKISDDTIKGGIEKILQTTGTYFKVEAGTRRFDSNAFENPATTPAGFSALGIPPLYT
GFVRATISQDLLKNSFGYKGKNEVKILESQAEIVKNQVSQQISAVIVESLVDFWDYSIKTQAVKTYKQLVENTKNIRNLT
IRKQSLGLSESFEVNQWNALLAQAENQLETAQVQKEESKRKLVRSLKIPDGTSLSEETNLLEELIEKPNYIKDLEYAYKH
RADFLNALKQKEIAEAALKNANNDRLPTLTISGTGASQAQNIISPQENYIDSNQGITTAKYKEWTGQINFAYPLADKGIY
AGVRDATIGMRQATLKEEELKNEVRDDVKTRIEALEASHRIYKNNITTERETQNYYNGVLRSFRQGRADAVSVKNALDTH
VQDQLRLTQAKVNFNIDLLRYYLAKNALLEHFQVDRDKLLPHLN
>Mature_524_residues
MKDKVKNWKQRLKIQKLSLTLLGNFVLLSIPLFADDSVLKLTTEETVKRALESNYNLQNLRYELAKSDTNFLKNDSKYSW
RLVADGRSSQSILPFNQTNIFTGTKISDDTIKGGIEKILQTTGTYFKVEAGTRRFDSNAFENPATTPAGFSALGIPPLYT
GFVRATISQDLLKNSFGYKGKNEVKILESQAEIVKNQVSQQISAVIVESLVDFWDYSIKTQAVKTYKQLVENTKNIRNLT
IRKQSLGLSESFEVNQWNALLAQAENQLETAQVQKEESKRKLVRSLKIPDGTSLSEETNLLEELIEKPNYIKDLEYAYKH
RADFLNALKQKEIAEAALKNANNDRLPTLTISGTGASQAQNIISPQENYIDSNQGITTAKYKEWTGQINFAYPLADKGIY
AGVRDATIGMRQATLKEEELKNEVRDDVKTRIEALEASHRIYKNNITTERETQNYYNGVLRSFRQGRADAVSVKNALDTH
VQDQLRLTQAKVNFNIDLLRYYLAKNALLEHFQVDRDKLLPHLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59527; Mature: 59527

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDKVKNWKQRLKIQKLSLTLLGNFVLLSIPLFADDSVLKLTTEETVKRALESNYNLQNL
CCCHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCEEEECHHHHHHHHHHCCCCHHHH
RYELAKSDTNFLKNDSKYSWRLVADGRSSQSILPFNQTNIFTGTKISDDTIKGGIEKILQ
HHHHHHCCHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHH
TTGTYFKVEAGTRRFDSNAFENPATTPAGFSALGIPPLYTGFVRATISQDLLKNSFGYKG
CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
KNEVKILESQAEIVKNQVSQQISAVIVESLVDFWDYSIKTQAVKTYKQLVENTKNIRNLT
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEE
IRKQSLGLSESFEVNQWNALLAQAENQLETAQVQKEESKRKLVRSLKIPDGTSLSEETNL
EEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
LEELIEKPNYIKDLEYAYKHRADFLNALKQKEIAEAALKNANNDRLPTLTISGTGASQAQ
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHH
NIISPQENYIDSNQGITTAKYKEWTGQINFAYPLADKGIYAGVRDATIGMRQATLKEEEL
HCCCCHHHCCCCCCCCEEEEHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
KNEVRDDVKTRIEALEASHRIYKNNITTERETQNYYNGVLRSFRQGRADAVSVKNALDTH
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VQDQLRLTQAKVNFNIDLLRYYLAKNALLEHFQVDRDKLLPHLN
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCC
>Mature Secondary Structure
MKDKVKNWKQRLKIQKLSLTLLGNFVLLSIPLFADDSVLKLTTEETVKRALESNYNLQNL
CCCHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCEEEECHHHHHHHHHHCCCCHHHH
RYELAKSDTNFLKNDSKYSWRLVADGRSSQSILPFNQTNIFTGTKISDDTIKGGIEKILQ
HHHHHHCCHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHH
TTGTYFKVEAGTRRFDSNAFENPATTPAGFSALGIPPLYTGFVRATISQDLLKNSFGYKG
CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
KNEVKILESQAEIVKNQVSQQISAVIVESLVDFWDYSIKTQAVKTYKQLVENTKNIRNLT
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEE
IRKQSLGLSESFEVNQWNALLAQAENQLETAQVQKEESKRKLVRSLKIPDGTSLSEETNL
EEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
LEELIEKPNYIKDLEYAYKHRADFLNALKQKEIAEAALKNANNDRLPTLTISGTGASQAQ
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHH
NIISPQENYIDSNQGITTAKYKEWTGQINFAYPLADKGIYAGVRDATIGMRQATLKEEEL
HCCCCHHHCCCCCCCCEEEEHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
KNEVRDDVKTRIEALEASHRIYKNNITTERETQNYYNGVLRSFRQGRADAVSVKNALDTH
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VQDQLRLTQAKVNFNIDLLRYYLAKNALLEHFQVDRDKLLPHLN
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA