| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327552
Identifier: 116327552
GI number: 116327552
Start: 889233
End: 889976
Strand: Direct
Name: 116327552
Synonym: LBL_0781
Alternate gene names: NA
Gene position: 889233-889976 (Clockwise)
Preceding gene: 116327551
Following gene: 116327553
Centisome position: 24.6
GC content: 38.17
Gene sequence:
>744_bases GTGAAGAATCTATACGTTCTTTTGTATTCCTTTTGGGTTCATTCTCGGTTCGGATTCTTCGTTCCGATGCTATTTTTTTT ATATTCTTGTACAAGTTTAGAATTGAATTCCGTAAGAGGCGTGGATTCGTCGAAACCGACCCTAAACTCCCGAAAGAATT CCGACATTTCAAATCATTCCTCTTCAAATTGTAAATCGAATGGCAAAAAATACCAATGGTATGTTCTTTTCGGTTCGGTT CCGATCAATACGGTGAACTATTCGGAGATCCTACCCGATCAAAATCATACTTATCGAGTGATTCTTAAAACGACTTGGTT GGACGGAATACTCAGTACGTTTTTGGGAATTGCCGCTTCCGTTACCCGTAAAACAATTGATGTCGAAAGTTGCGGTTCTA AAGAAACTACTGTTGCAGTTACCAGCGATTCGGAAAAACCCGAAAAAGAAATTTCCAAAGTTGATGTGACGGGAATTAAG GAAGAGTTTATTAAACGGAATGAAAAACAATGGAAAGAGGAGTTCCAAGAGAGGATTCATTCTTCTTTGAAAGAGGAACT GGAAAGTTCCTGGAATAAAGAAGTGAAACATTCGAAGAGTCTTTCCGTGCTGTTTTTGAAGTCGGGTGAAATCGTCAAAG GAACCGTAATCCGAATCGATGAAAACGGAGTTAAATTGTTTTATAAGGGTAAAGAAAGAAGTTTCCAACGTTCGGATATT CAAAGAGTTCGATTTCAAGATTAA
Upstream 100 bases:
>100_bases ATTATCTCGGAATCGTGATAGAAAAAAACTGGTCTTTAAAATAGTTTCTAAAAATATGCGAACAGCGCATAATTTTATGA ATCTAGGAGTTCGTCTTAAA
Downstream 100 bases:
>100_bases GGCGATAAATAAAATTATGACGGATGTTCGAATGCTTTTTTTTTAGGATCTTTCTTTCTTTTTTTCTACTTTTAAACTCG GCTTGTTACTTGAATCCTTA
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MKNLYVLLYSFWVHSRFGFFVPMLFFLYSCTSLELNSVRGVDSSKPTLNSRKNSDISNHSSSNCKSNGKKYQWYVLFGSV PINTVNYSEILPDQNHTYRVILKTTWLDGILSTFLGIAASVTRKTIDVESCGSKETTVAVTSDSEKPEKEISKVDVTGIK EEFIKRNEKQWKEEFQERIHSSLKEELESSWNKEVKHSKSLSVLFLKSGEIVKGTVIRIDENGVKLFYKGKERSFQRSDI QRVRFQD
Sequences:
>Translated_247_residues MKNLYVLLYSFWVHSRFGFFVPMLFFLYSCTSLELNSVRGVDSSKPTLNSRKNSDISNHSSSNCKSNGKKYQWYVLFGSV PINTVNYSEILPDQNHTYRVILKTTWLDGILSTFLGIAASVTRKTIDVESCGSKETTVAVTSDSEKPEKEISKVDVTGIK EEFIKRNEKQWKEEFQERIHSSLKEELESSWNKEVKHSKSLSVLFLKSGEIVKGTVIRIDENGVKLFYKGKERSFQRSDI QRVRFQD >Mature_247_residues MKNLYVLLYSFWVHSRFGFFVPMLFFLYSCTSLELNSVRGVDSSKPTLNSRKNSDISNHSSSNCKSNGKKYQWYVLFGSV PINTVNYSEILPDQNHTYRVILKTTWLDGILSTFLGIAASVTRKTIDVESCGSKETTVAVTSDSEKPEKEISKVDVTGIK EEFIKRNEKQWKEEFQERIHSSLKEELESSWNKEVKHSKSLSVLFLKSGEIVKGTVIRIDENGVKLFYKGKERSFQRSDI QRVRFQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28480; Mature: 28480
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLYVLLYSFWVHSRFGFFVPMLFFLYSCTSLELNSVRGVDSSKPTLNSRKNSDISNHS CCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCC SSNCKSNGKKYQWYVLFGSVPINTVNYSEILPDQNHTYRVILKTTWLDGILSTFLGIAAS CCCCCCCCCEEEEEEEECCCCCCCCCHHHHCCCCCCEEEEEEEEHHHHHHHHHHHHHHHH VTRKTIDVESCGSKETTVAVTSDSEKPEKEISKVDVTGIKEEFIKRNEKQWKEEFQERIH HHHHEEEHHCCCCCCEEEEEECCCCCCHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHH SSLKEELESSWNKEVKHSKSLSVLFLKSGEIVKGTVIRIDENGVKLFYKGKERSFQRSDI HHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEEEEECCCEEEEEECCCCCCHHHHH QRVRFQD HHHCCCC >Mature Secondary Structure MKNLYVLLYSFWVHSRFGFFVPMLFFLYSCTSLELNSVRGVDSSKPTLNSRKNSDISNHS CCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCC SSNCKSNGKKYQWYVLFGSVPINTVNYSEILPDQNHTYRVILKTTWLDGILSTFLGIAAS CCCCCCCCCEEEEEEEECCCCCCCCCHHHHCCCCCCEEEEEEEEHHHHHHHHHHHHHHHH VTRKTIDVESCGSKETTVAVTSDSEKPEKEISKVDVTGIKEEFIKRNEKQWKEEFQERIH HHHHEEEHHCCCCCCEEEEEECCCCCCHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHH SSLKEELESSWNKEVKHSKSLSVLFLKSGEIVKGTVIRIDENGVKLFYKGKERSFQRSDI HHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEEEEECCCEEEEEECCCCCCHHHHH QRVRFQD HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA