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The map label for this gene is nikC [C]

Identifier: 116327547

GI number: 116327547

Start: 883037

End: 883798

Strand: Direct

Name: nikC [C]

Synonym: LBL_0776

Alternate gene names: 116327547

Gene position: 883037-883798 (Clockwise)

Preceding gene: 116327546

Following gene: 116327548

Centisome position: 24.43

GC content: 45.14

Gene sequence:

>762_bases
TTGATTTCGTTCGGCAATTTTCTGAGAGCTCTTTTTGTGTTTTCGGTTTTGATCGGAGTTTTTTGGAAAAGTCCGCCCAC
GAACGTTTTTTTGGAAAACAGTTTTTGTTCCGTGACTTGGGATCGCCCTTTCGGTTGTGATCGTTTGGGAAGGGATGTTT
ATGGTCTTTTTTCATACGGAACCGTTTCGACTTTTCTGTTTTCGCTTCCTGCTCGACTTCTTACTTTGGCGTTTAGTTCT
TTGGTCTGTCTGTTTCAATACTCAGTCCCGTTTACGGGAAGGTGGTTTTTTGTTCCGATCTCGTCCGTGTTCGTCTCCGT
TCCTTCCTTGCTTATCGCACTTCTTACGGTTCATGCTTTAGGGCATAGCCCTTTTGTTTTGATCGTCGCGGTTTTGTTGG
GAGATTGGGCTTTCTCTTACGAAACGATTCAGAGTAAAATCAGGGAAACGGACGGAAGCGGATTCGTACTTGCGTCCGTT
TTCTTTGGAGCTTCGAGATCGAATGTATTTCGATCTCATATATTTCCTGCCGCTCTTCCGGTCTTAAAAGTTCTATTTAC
TACTGGCTTACCCGGAGTTGTAATGACGTTGGCGCTTTTTAGTTACCTCGGCGTGAGTGCGGGTGCGGATTGGTTTGGTC
CCGGTCTTGGAGAACAAATCTCTTTTGCTAGGGATTACGCTTATTCAGCCCCTTTGGCTTTGGGGATGCCTATTTTTGGG
ATCGTAGGTTTGGTTGCCGTTTTAAACGTGGGAAAAAGATGA

Upstream 100 bases:

>100_bases
TACTTAGCGCCCTTCTCTTTTACAGCGGTCTTACATTTTACGTTTTCGGTAGGGTCTCTATTCGTTTTCAGGAAAATCTT
ACCGGTAAGGAGAGTTCTTC

Downstream 100 bases:

>100_bases
TTAGAATATCCGCATTTCTTTTAATATTAGCGATTTTGAGTATAGAAGTTTTTGCGGAGGGAATTGACGATTATTATCGT
TTTTCGGAAGGTGGAATGCC

Product: ABC transporter permease

Products: Ni2; [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: Dipeptide/Oligopeptide ABC Transporter Permease; ABC Transporter Inner Membrane Protein

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MISFGNFLRALFVFSVLIGVFWKSPPTNVFLENSFCSVTWDRPFGCDRLGRDVYGLFSYGTVSTFLFSLPARLLTLAFSS
LVCLFQYSVPFTGRWFFVPISSVFVSVPSLLIALLTVHALGHSPFVLIVAVLLGDWAFSYETIQSKIRETDGSGFVLASV
FFGASRSNVFRSHIFPAALPVLKVLFTTGLPGVVMTLALFSYLGVSAGADWFGPGLGEQISFARDYAYSAPLALGMPIFG
IVGLVAVLNVGKR

Sequences:

>Translated_253_residues
MISFGNFLRALFVFSVLIGVFWKSPPTNVFLENSFCSVTWDRPFGCDRLGRDVYGLFSYGTVSTFLFSLPARLLTLAFSS
LVCLFQYSVPFTGRWFFVPISSVFVSVPSLLIALLTVHALGHSPFVLIVAVLLGDWAFSYETIQSKIRETDGSGFVLASV
FFGASRSNVFRSHIFPAALPVLKVLFTTGLPGVVMTLALFSYLGVSAGADWFGPGLGEQISFARDYAYSAPLALGMPIFG
IVGLVAVLNVGKR
>Mature_253_residues
MISFGNFLRALFVFSVLIGVFWKSPPTNVFLENSFCSVTWDRPFGCDRLGRDVYGLFSYGTVSTFLFSLPARLLTLAFSS
LVCLFQYSVPFTGRWFFVPISSVFVSVPSLLIALLTVHALGHSPFVLIVAVLLGDWAFSYETIQSKIRETDGSGFVLASV
FFGASRSNVFRSHIFPAALPVLKVLFTTGLPGVVMTLALFSYLGVSAGADWFGPGLGEQISFARDYAYSAPLALGMPIFG
IVGLVAVLNVGKR

Specific function: Involved In A Nickel Transport System, Probably Translocates Nickel Through The Bacterial Inner Membrane. [C]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane. [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27536; Mature: 27536

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISFGNFLRALFVFSVLIGVFWKSPPTNVFLENSFCSVTWDRPFGCDRLGRDVYGLFSYG
CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEECCCCCHHHHCHHHHHHHHHH
TVSTFLFSLPARLLTLAFSSLVCLFQYSVPFTGRWFFVPISSVFVSVPSLLIALLTVHAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHC
GHSPFVLIVAVLLGDWAFSYETIQSKIRETDGSGFVLASVFFGASRSNVFRSHIFPAALP
CCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCHHHHHHHHHHHHHHH
VLKVLFTTGLPGVVMTLALFSYLGVSAGADWFGPGLGEQISFARDYAYSAPLALGMPIFG
HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCHHHH
IVGLVAVLNVGKR
HHHHHHHHHCCCC
>Mature Secondary Structure
MISFGNFLRALFVFSVLIGVFWKSPPTNVFLENSFCSVTWDRPFGCDRLGRDVYGLFSYG
CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEECCCCCHHHHCHHHHHHHHHH
TVSTFLFSLPARLLTLAFSSLVCLFQYSVPFTGRWFFVPISSVFVSVPSLLIALLTVHAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHC
GHSPFVLIVAVLLGDWAFSYETIQSKIRETDGSGFVLASVFFGASRSNVFRSHIFPAALP
CCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCHHHHHHHHHHHHHHH
VLKVLFTTGLPGVVMTLALFSYLGVSAGADWFGPGLGEQISFARDYAYSAPLALGMPIFG
HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCHHHH
IVGLVAVLNVGKR
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Ni2; [Periplasm]; ATP; H2O [C]

Specific reaction: Ni2+ [Periplasm] + ATP + H2O = Ni2+ [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA