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The map label for this gene is 116327543

Identifier: 116327543

GI number: 116327543

Start: 879559

End: 880710

Strand: Direct

Name: 116327543

Synonym: LBL_0772

Alternate gene names: NA

Gene position: 879559-880710 (Clockwise)

Preceding gene: 116327542

Following gene: 116327544

Centisome position: 24.33

GC content: 42.36

Gene sequence:

>1152_bases
TTGAAGCCCTCCGCTTTTACTCTCAAACCAGGATTGGTCCACGGAAAATTTTCTCGTAAGACCGTCCTGGAAGAACCTTT
TACATTATTTCCCGAATCGGGGGCGCTCTATCTAAAAGAATTCCCCACTCGCGTGCGTGCAGGAGAACCTCTCGTCCGGC
AATCCGTCGGAACACTTTTATCTCCGGTAGACGGAATCGCAAGTCTCATCCAAGGAGAACATTCCACAAAGATCCGAATC
GTTCAAGACGGGAGTTTTCAATTGTCGGGTGAGATTCAAATCGATCCTTCTTTGAAATTGGAAGAAGCCTTGGAAAGAAT
GGATGAACTCGGACTTGTTTCTCTCGATTTCCCGGACACTACGTTATCCTCTCTTTTCAAAGCGTTTCAGTCGTCTTTAA
TCGTTCTTTCTCCATATACAAAGACCCAATCCGTCGACTTTCGAAAAATTCTTTTGAAAGAATGCAAAGAATTACATATT
CTATTTTTGGAATATGTGGCGGCCTGGTTTCCGGGAGCCGTAATCAAGGATCATATTTTGTCTCCCGTTCCTTTTCGAAA
GTACGAATACCCGGTCGGCTTTCCCCAATATTTCGTAAAAAAGGCGTTTTCCGAAAAAGTATTCCAAAAAGAGAAAATTC
TTTATCTCGGACCGGAAACCCTCTATCATCTTTACAGGGCTTTGTTCAGAAAGATTCCTTATATCGAAAGGCATATCAGT
ATATATTACGTAGGAAAAAACGGCGATCTCAAAAAAGAGGAATCTCCGATCAAGTTTAGAGATGGACAGAGTCTTAGTTT
TCTTCTTCTCGAAAAAAGGAAGGAATACCCGAGTTTCACTTTCAATTCCTTTTTTGACGGAGGGGAGTTTCATTCCTCTT
CCGATGAATATTTTTTAGATATTTACAAACATCATTCCATCATATTCGTTTCGGATAAAATCAGAGAGCGGAAAGAATTT
CCTTGTATCGAGTGCGGAGAATGTACTTACAACTGTCCTCTGGAATGTAATCCGGTTTCCCTTGTTACCGGTCAGGGGCG
ATTTTTTGCAAACGCTTGCATCGAATGCGGAATTTGTACGTTTCTCTGCCCTTCTCGAATTTCACTCAGGGACCGAATCC
GAAACGCAAAAAGGGAGGATCGGAATGCCTGA

Upstream 100 bases:

>100_bases
TGAGCCGATGGGTGAAATTCTTCCTTATATCAAAAATCTTAAGAAAGAACTTCCGATCAAAGACGAAATCTACATGGTGA
AAACTCTCACCTAAAGAGTT

Downstream 100 bases:

>100_bases
TTATCTCCTTGTCACGAAGACCGGTTTTTTTCGTAAATCGGATCCATTTTTTCCGGATATTTTGATCGGATTGTTTTCGA
TCGCCGGAATCGTTTTGTTC

Product: oxidoreductase

Products: NA

Alternate protein names: NADH Oxidoreductase Complex RnfABCDGE Type C Subunit; Oxidoreductase-Like Protein

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MKPSAFTLKPGLVHGKFSRKTVLEEPFTLFPESGALYLKEFPTRVRAGEPLVRQSVGTLLSPVDGIASLIQGEHSTKIRI
VQDGSFQLSGEIQIDPSLKLEEALERMDELGLVSLDFPDTTLSSLFKAFQSSLIVLSPYTKTQSVDFRKILLKECKELHI
LFLEYVAAWFPGAVIKDHILSPVPFRKYEYPVGFPQYFVKKAFSEKVFQKEKILYLGPETLYHLYRALFRKIPYIERHIS
IYYVGKNGDLKKEESPIKFRDGQSLSFLLLEKRKEYPSFTFNSFFDGGEFHSSSDEYFLDIYKHHSIIFVSDKIRERKEF
PCIECGECTYNCPLECNPVSLVTGQGRFFANACIECGICTFLCPSRISLRDRIRNAKREDRNA

Sequences:

>Translated_383_residues
MKPSAFTLKPGLVHGKFSRKTVLEEPFTLFPESGALYLKEFPTRVRAGEPLVRQSVGTLLSPVDGIASLIQGEHSTKIRI
VQDGSFQLSGEIQIDPSLKLEEALERMDELGLVSLDFPDTTLSSLFKAFQSSLIVLSPYTKTQSVDFRKILLKECKELHI
LFLEYVAAWFPGAVIKDHILSPVPFRKYEYPVGFPQYFVKKAFSEKVFQKEKILYLGPETLYHLYRALFRKIPYIERHIS
IYYVGKNGDLKKEESPIKFRDGQSLSFLLLEKRKEYPSFTFNSFFDGGEFHSSSDEYFLDIYKHHSIIFVSDKIRERKEF
PCIECGECTYNCPLECNPVSLVTGQGRFFANACIECGICTFLCPSRISLRDRIRNAKREDRNA
>Mature_383_residues
MKPSAFTLKPGLVHGKFSRKTVLEEPFTLFPESGALYLKEFPTRVRAGEPLVRQSVGTLLSPVDGIASLIQGEHSTKIRI
VQDGSFQLSGEIQIDPSLKLEEALERMDELGLVSLDFPDTTLSSLFKAFQSSLIVLSPYTKTQSVDFRKILLKECKELHI
LFLEYVAAWFPGAVIKDHILSPVPFRKYEYPVGFPQYFVKKAFSEKVFQKEKILYLGPETLYHLYRALFRKIPYIERHIS
IYYVGKNGDLKKEESPIKFRDGQSLSFLLLEKRKEYPSFTFNSFFDGGEFHSSSDEYFLDIYKHHSIIFVSDKIRERKEF
PCIECGECTYNCPLECNPVSLVTGQGRFFANACIECGICTFLCPSRISLRDRIRNAKREDRNA

Specific function: Unknown

COG id: COG4656

COG function: function code C; Predicted NADH:ubiquinone oxidoreductase, subunit RnfC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43991; Mature: 43991

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPSAFTLKPGLVHGKFSRKTVLEEPFTLFPESGALYLKEFPTRVRAGEPLVRQSVGTLL
CCCCCEEECCCCEECCCCCHHHHCCCCEECCCCCCCHHHHCCHHHCCCCHHHHHHHHHHH
SPVDGIASLIQGEHSTKIRIVQDGSFQLSGEIQIDPSLKLEEALERMDELGLVSLDFPDT
CCHHHHHHHHCCCCCCEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHCCEEEECCCCH
TLSSLFKAFQSSLIVLSPYTKTQSVDFRKILLKECKELHILFLEYVAAWFPGAVIKDHIL
HHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC
SPVPFRKYEYPVGFPQYFVKKAFSEKVFQKEKILYLGPETLYHLYRALFRKIPYIERHIS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHCCCEEEEEE
IYYVGKNGDLKKEESPIKFRDGQSLSFLLLEKRKEYPSFTFNSFFDGGEFHSSSDEYFLD
EEEEECCCCCCCCCCCCEEECCCCEEHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCEEEE
IYKHHSIIFVSDKIRERKEFPCIECGECTYNCPLECNPVSLVTGQGRFFANACIECGICT
EEECCEEEEEEHHHHHHHCCCCEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCHHH
FLCPSRISLRDRIRNAKREDRNA
HHCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKPSAFTLKPGLVHGKFSRKTVLEEPFTLFPESGALYLKEFPTRVRAGEPLVRQSVGTLL
CCCCCEEECCCCEECCCCCHHHHCCCCEECCCCCCCHHHHCCHHHCCCCHHHHHHHHHHH
SPVDGIASLIQGEHSTKIRIVQDGSFQLSGEIQIDPSLKLEEALERMDELGLVSLDFPDT
CCHHHHHHHHCCCCCCEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHCCEEEECCCCH
TLSSLFKAFQSSLIVLSPYTKTQSVDFRKILLKECKELHILFLEYVAAWFPGAVIKDHIL
HHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC
SPVPFRKYEYPVGFPQYFVKKAFSEKVFQKEKILYLGPETLYHLYRALFRKIPYIERHIS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHCCCEEEEEE
IYYVGKNGDLKKEESPIKFRDGQSLSFLLLEKRKEYPSFTFNSFFDGGEFHSSSDEYFLD
EEEEECCCCCCCCCCCCEEECCCCEEHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCEEEE
IYKHHSIIFVSDKIRERKEFPCIECGECTYNCPLECNPVSLVTGQGRFFANACIECGICT
EEECCEEEEEEHHHHHHHCCCCEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCHHH
FLCPSRISLRDRIRNAKREDRNA
HHCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA