| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327421
Identifier: 116327421
GI number: 116327421
Start: 703075
End: 703665
Strand: Reverse
Name: 116327421
Synonym: LBL_0631
Alternate gene names: NA
Gene position: 703665-703075 (Counterclockwise)
Preceding gene: 116327422
Following gene: 116327420
Centisome position: 19.47
GC content: 40.27
Gene sequence:
>591_bases ATGTCAGCTCGCGTCTTCCTTTATTTTTCTATTTTTCTCATTTTGATCGGATCGGCCTTCGCTGCATACGCACCTGATCT GTTCCAATGGGAAACCTTGGAATGGATCTACGAAAAAAGAACCTTCTTCTTATTTTCCCTCATCTTTATGATATCAATCG TTTTGATCTATCTGATCTATCTGAAAGCGAGAAGAGGAGCTCTTCACTCCAAAAGTAAAACGGAAATTCATCTACAAACG TCCCTAAACGAAGTAGTCCGGGATAACCAGTCTCTTTTTTCATTCTTAAAATCGGCTAAGGACACCCTTGGAAAACAGAT CGCATCCTCCAGAGCGAATTTCTCTCCCGAATTTTTCTCGGCGTGTTCCATCCAGTATCAAAAGCTTACGCAAGAGTTCG ATTTATCGGAGGAGATATTCAACGATATCCCCTTGATCCCGGAGGAAGTCGGCAACAAAAGAAAAAACGGAAATAATTTT AGAATTTCTGAATATTCAGATCTCATTAATCGCCACAGAAAACTTTCCCGAACCCTCGAAAAATTAAGAGAAGATCTTAC TCGTCTTAGAGACAAGGTTTCCGGAATATGA
Upstream 100 bases:
>100_bases TATCGGAAAAGCCCCGAACGATCTTAAATTTCGCCGGGAGTTTTCTTTCCGGTAGAAGCTTTCTTGACAAGAATACCTTG GGAATATGTCATGAAACCGA
Downstream 100 bases:
>100_bases AAATTCACGCATTTACCGCATTCTTCTTTTTCGTTTTTATCCTGAGTTGTTTTTCTCAAACGAAAGAATCATCCGTTTTC TCTCAGGAGCAGGATCGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MSARVFLYFSIFLILIGSAFAAYAPDLFQWETLEWIYEKRTFFLFSLIFMISIVLIYLIYLKARRGALHSKSKTEIHLQT SLNEVVRDNQSLFSFLKSAKDTLGKQIASSRANFSPEFFSACSIQYQKLTQEFDLSEEIFNDIPLIPEEVGNKRKNGNNF RISEYSDLINRHRKLSRTLEKLREDLTRLRDKVSGI
Sequences:
>Translated_196_residues MSARVFLYFSIFLILIGSAFAAYAPDLFQWETLEWIYEKRTFFLFSLIFMISIVLIYLIYLKARRGALHSKSKTEIHLQT SLNEVVRDNQSLFSFLKSAKDTLGKQIASSRANFSPEFFSACSIQYQKLTQEFDLSEEIFNDIPLIPEEVGNKRKNGNNF RISEYSDLINRHRKLSRTLEKLREDLTRLRDKVSGI >Mature_195_residues SARVFLYFSIFLILIGSAFAAYAPDLFQWETLEWIYEKRTFFLFSLIFMISIVLIYLIYLKARRGALHSKSKTEIHLQTS LNEVVRDNQSLFSFLKSAKDTLGKQIASSRANFSPEFFSACSIQYQKLTQEFDLSEEIFNDIPLIPEEVGNKRKNGNNFR ISEYSDLINRHRKLSRTLEKLREDLTRLRDKVSGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22928; Mature: 22797
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARVFLYFSIFLILIGSAFAAYAPDLFQWETLEWIYEKRTFFLFSLIFMISIVLIYLIY CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKARRGALHSKSKTEIHLQTSLNEVVRDNQSLFSFLKSAKDTLGKQIASSRANFSPEFFS HHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH ACSIQYQKLTQEFDLSEEIFNDIPLIPEEVGNKRKNGNNFRISEYSDLINRHRKLSRTLE HHHHHHHHHHHHCCHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH KLREDLTRLRDKVSGI HHHHHHHHHHHHHCCC >Mature Secondary Structure SARVFLYFSIFLILIGSAFAAYAPDLFQWETLEWIYEKRTFFLFSLIFMISIVLIYLIY CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKARRGALHSKSKTEIHLQTSLNEVVRDNQSLFSFLKSAKDTLGKQIASSRANFSPEFFS HHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH ACSIQYQKLTQEFDLSEEIFNDIPLIPEEVGNKRKNGNNFRISEYSDLINRHRKLSRTLE HHHHHHHHHHHHCCHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH KLREDLTRLRDKVSGI HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA