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The map label for this gene is 116327397

Identifier: 116327397

GI number: 116327397

Start: 671455

End: 672048

Strand: Reverse

Name: 116327397

Synonym: LBL_0600

Alternate gene names: NA

Gene position: 672048-671455 (Counterclockwise)

Preceding gene: 116327399

Following gene: 116327396

Centisome position: 18.59

GC content: 42.09

Gene sequence:

>594_bases
TTGTGCAATGCGCAAAAGACGCAACCAATTAAGATGAAACTTCTAAAACGATACGCGAATCGAAGGCTCTATGATCCCGA
AACGAGTAAAACAATCACTCTTGAGGATGTAGCGGATATGATTATCAACGGCGAAGAAATTCGTGTGATCGATAACATGT
CCGGTTCCGATATCACTCCGAAAATTCTCGGACAAACTTTTCTCAAAGTTTCTCTGGGACAAAGGAACGAAGAATTTTCA
AACTTCATGCTTTCTGCTCTGATTCGAGAAACCGGGAAAGACATAAGTTCTTTGTTCGGTAGATTGGTCTTAGGTGGAAT
CGGCGCGAGCTATCTCACCCGAGATCGATTGGAAAAAATTCTTCAATCCATGATTTCGTTAGGCGAACTCAAACTCGAAA
TGGCTACGGAATACAGAGACGATCTCCTGACACATATGGCGAGCAGAGCCTCCGAAAACAAGTTGAGAATTCAAGAAGAC
CTCAAAAAAATCGGTAAAGAACTGGAAGATTCCACGGAAACCGATTTACCGTTAGAGGATCTATCCGAAAAAATCCGTAA
AATCGCCGAAAGTGTAAAAGAAAAGGAAGCCTGA

Upstream 100 bases:

>100_bases
TTCTTCCTTTTTTGTAAGTCCACTTAGGAAGAGACAATCGAACAATAGACTTGCCATGGGTATTTTGCTTGACCGAAGAC
TTTTCCGACAAATCCTAGAA

Downstream 100 bases:

>100_bases
AATTTTAAGCCGACGATTTCAAATACCGATATTAACAGAGAGGGAATGCCATGTTTAAAAATATTTCGATCTCTATCATT
TCGTTTTCTATCAGTGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF4 [H]

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MCNAQKTQPIKMKLLKRYANRRLYDPETSKTITLEDVADMIINGEEIRVIDNMSGSDITPKILGQTFLKVSLGQRNEEFS
NFMLSALIRETGKDISSLFGRLVLGGIGASYLTRDRLEKILQSMISLGELKLEMATEYRDDLLTHMASRASENKLRIQED
LKKIGKELEDSTETDLPLEDLSEKIRKIAESVKEKEA

Sequences:

>Translated_197_residues
MCNAQKTQPIKMKLLKRYANRRLYDPETSKTITLEDVADMIINGEEIRVIDNMSGSDITPKILGQTFLKVSLGQRNEEFS
NFMLSALIRETGKDISSLFGRLVLGGIGASYLTRDRLEKILQSMISLGELKLEMATEYRDDLLTHMASRASENKLRIQED
LKKIGKELEDSTETDLPLEDLSEKIRKIAESVKEKEA
>Mature_197_residues
MCNAQKTQPIKMKLLKRYANRRLYDPETSKTITLEDVADMIINGEEIRVIDNMSGSDITPKILGQTFLKVSLGQRNEEFS
NFMLSALIRETGKDISSLFGRLVLGGIGASYLTRDRLEKILQSMISLGELKLEMATEYRDDLLTHMASRASENKLRIQED
LKKIGKELEDSTETDLPLEDLSEKIRKIAESVKEKEA

Specific function: Unknown

COG id: COG5394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012909
- InterPro:   IPR010134
- InterPro:   IPR007897 [H]

Pfam domain/function: PF05233 PHB_acc; PF07879 PHB_acc_N [H]

EC number: NA

Molecular weight: Translated: 22357; Mature: 22357

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCNAQKTQPIKMKLLKRYANRRLYDPETSKTITLEDVADMIINGEEIRVIDNMSGSDITP
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHCCCCEEEEECCCCCCCCH
KILGQTFLKVSLGQRNEEFSNFMLSALIRETGKDISSLFGRLVLGGIGASYLTRDRLEKI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCHHHHHHHHHHHH
LQSMISLGELKLEMATEYRDDLLTHMASRASENKLRIQEDLKKIGKELEDSTETDLPLED
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHH
LSEKIRKIAESVKEKEA
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MCNAQKTQPIKMKLLKRYANRRLYDPETSKTITLEDVADMIINGEEIRVIDNMSGSDITP
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHCCCCEEEEECCCCCCCCH
KILGQTFLKVSLGQRNEEFSNFMLSALIRETGKDISSLFGRLVLGGIGASYLTRDRLEKI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCHHHHHHHHHHHH
LQSMISLGELKLEMATEYRDDLLTHMASRASENKLRIQEDLKKIGKELEDSTETDLPLED
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHH
LSEKIRKIAESVKEKEA
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1396692 [H]