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The map label for this gene is motB-3 [H]

Identifier: 116327359

GI number: 116327359

Start: 614624

End: 615298

Strand: Reverse

Name: motB-3 [H]

Synonym: LBL_0555

Alternate gene names: 116327359

Gene position: 615298-614624 (Counterclockwise)

Preceding gene: 116327362

Following gene: 116327353

Centisome position: 17.02

GC content: 43.11

Gene sequence:

>675_bases
ATGAAATTTAAAACTCTTTCTATTTTTGTTCTTTTGAATCTGGTCTACTGCGTTTCCAATTCGAAGTACGAGTCTCTTCT
AAAATCTTATGAAGAATCAAAACTGGAAAACCAAAGAATTCTTGAGGAAAAAGTGAATCTTTCTCGTTCTTTGAACGAAT
TAAAACGGATCCAAGAAGAATCCGAATTGAGAATTCAGGAATACAGAAGACTGATCGCTACTTTTCGTTCTCTAATCGAT
GCGGGTAAACTCAAAATTAAGATCATAGACGGAAGAATGGTTGTGGTTCTTTCCTCGGATATTCTCTTCCCAGTAGGCTC
TGCATTCCTGTCTTCCGCCGGAATCGCATCCATTCGGGAAGTAACCACCTTGCTCGCCTCTTTGGGAGGAAAACGTTTTC
AAATAGAAGGACATACGGACGATACTCCGACCGGCATCAAAGGTTATACGAATTGGGAATTGGCTTCCTCAAGGGCTCTT
AATGTTCTTCATACGATGATTAAGGCCGGGATGCCCGAGGAGAGAATCAGCGCCGCAAGCATGGGAGCGTCTAGACCGGC
TCTCCCGAACACTTCCCCCGAAAATCGCTCCGCAAATCGAAGGATAGAAATCGTAATCGTTCCCGACCTAACCAATCTTC
CCGGAATGGATGAGTTGAAAAAGTATTCGAATTGA

Upstream 100 bases:

>100_bases
CATATACTTGATGAAAAGATTTTTTTATTCATTCATCTATCCCTTTTGTTTTTTTACGTTTTGCCGACAAATAAAACAGA
TATCACTTCGGTAAAATCTC

Downstream 100 bases:

>100_bases
TTTTTTCGAATAATATTATAAAAATTGAATCTTAAACGAAAGTATAGGCCCAGTAAATCAATAAAAGCTGAAGTGGAAGT
CTTAAAAGTAAAACCCACTT

Product: endoflagellar motor protein

Products: NA

Alternate protein names: Chemotaxis protein MotB [H]

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MKFKTLSIFVLLNLVYCVSNSKYESLLKSYEESKLENQRILEEKVNLSRSLNELKRIQEESELRIQEYRRLIATFRSLID
AGKLKIKIIDGRMVVVLSSDILFPVGSAFLSSAGIASIREVTTLLASLGGKRFQIEGHTDDTPTGIKGYTNWELASSRAL
NVLHTMIKAGMPEERISAASMGASRPALPNTSPENRSANRRIEIVIVPDLTNLPGMDELKKYSN

Sequences:

>Translated_224_residues
MKFKTLSIFVLLNLVYCVSNSKYESLLKSYEESKLENQRILEEKVNLSRSLNELKRIQEESELRIQEYRRLIATFRSLID
AGKLKIKIIDGRMVVVLSSDILFPVGSAFLSSAGIASIREVTTLLASLGGKRFQIEGHTDDTPTGIKGYTNWELASSRAL
NVLHTMIKAGMPEERISAASMGASRPALPNTSPENRSANRRIEIVIVPDLTNLPGMDELKKYSN
>Mature_224_residues
MKFKTLSIFVLLNLVYCVSNSKYESLLKSYEESKLENQRILEEKVNLSRSLNELKRIQEESELRIQEYRRLIATFRSLID
AGKLKIKIIDGRMVVVLSSDILFPVGSAFLSSAGIASIREVTTLLASLGGKRFQIEGHTDDTPTGIKGYTNWELASSRAL
NVLHTMIKAGMPEERISAASMGASRPALPNTSPENRSANRRIEIVIVPDLTNLPGMDELKKYSN

Specific function: MotA and MotB comprise the stator element of the flagellar motor complex. Required for the rotation of the flagellar motor. Might be a linker that fastens the torque- generating machinery to the cell wall [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell inner membrane; Single- pass type II membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 25047; Mature: 25047

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFKTLSIFVLLNLVYCVSNSKYESLLKSYEESKLENQRILEEKVNLSRSLNELKRIQEE
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SELRIQEYRRLIATFRSLIDAGKLKIKIIDGRMVVVLSSDILFPVGSAFLSSAGIASIRE
HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEECCHHHHHHHHHHHHCCHHHHHH
VTTLLASLGGKRFQIEGHTDDTPTGIKGYTNWELASSRALNVLHTMIKAGMPEERISAAS
HHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
MGASRPALPNTSPENRSANRRIEIVIVPDLTNLPGMDELKKYSN
CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHCCC
>Mature Secondary Structure
MKFKTLSIFVLLNLVYCVSNSKYESLLKSYEESKLENQRILEEKVNLSRSLNELKRIQEE
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SELRIQEYRRLIATFRSLIDAGKLKIKIIDGRMVVVLSSDILFPVGSAFLSSAGIASIRE
HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEECCHHHHHHHHHHHHCCHHHHHH
VTTLLASLGGKRFQIEGHTDDTPTGIKGYTNWELASSRALNVLHTMIKAGMPEERISAAS
HHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
MGASRPALPNTSPENRSANRRIEIVIVPDLTNLPGMDELKKYSN
CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8755894; 9665876 [H]