| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
Click here to switch to the map view.
The map label for this gene is 116327348
Identifier: 116327348
GI number: 116327348
Start: 598570
End: 599655
Strand: Reverse
Name: 116327348
Synonym: LBL_0544
Alternate gene names: NA
Gene position: 599655-598570 (Counterclockwise)
Preceding gene: 116327349
Following gene: 116327341
Centisome position: 16.59
GC content: 38.86
Gene sequence:
>1086_bases ATGAAACAAAATGAAATAGATTTTCAACACCCTAGTACCCGAGATCAAATCCGATTTTACTCGTTGGTTGCGATAGCCGG AATTCTGATGGTTGTCGCTTATCAATTCGGATCCTCCTCTTACTATTTAGGCTGGTTTGCATTTTTTATCAGCGCGTTTT CCGTAGCCGGAAACGACGCGGTACAAACAATCGGAACTTTTATAGAAAGTAAAAAAGTAGTTCACTGGATCTCAAAGTTA ATTGTTTTAGGGGGAACCATCGTCGTCATTTTTTTAAGTACTTGGATTTGGAACGATTTTCAGATTCATTTCGGGCGTTT GGAAAATTTTCCAGAAGTTCGAAAATTCAATCTCATACAACTTTTAGCTCCATTGATTCTAGTCGTAATCACCCGACTGA AATCTCCTATTTCCACCACCTTTTTAATCTTGGGACTTTTCAGCGGAAGTAATATCGAAAAGATGCTGACTAAATCTTTT TTCGGCTACGGAATTGCATTCGGCATTGCAATTTTTGTTTGGGGAGTTTTGGTAAAAATCGATCCGAAAGAATATACTGA AGATCACATTCCAGATCCGAGAAGTGAAAAACGTTGGGCTATTTTTCAATGGTTATCCACAATTTATCTTTGGATCGCTT GGTTACGTCAAGACGCGGCAAACATCGTAATTTATCTCCCTAGACAACTTTCTATTTTAGAATTCATCCTCGCAGTCGGA ATACTTGTCGTTGCTTTAGGAATTATTCTTTATACAAACGGCGGAACTATTCAAGAAATTGTAACGGAAAAATCGGATAT TCAATGGTCCAAAGCCGCAACAATTGTGGATTTGGTTTACGGCACCATTCTGATTGTCTTTCATGAATGGAGTCAAATGC CCATGTCGACCACTTGGGTATTTTTAGGAATGCTCGCAGGTCGGGAAATCATTCTCAATTTCATGACTTTCAGGGATCTT CCTTATTTAGAAACGTTTCGAAAGGTAGGAAAAGACGTATTACTTGCATCAATGGGGATTGCCGTCAGCATTTTTATTTT CATCTTAGCTTCTCAAATTTACCCGGACACTGCTTCGGGCTCTTAA
Upstream 100 bases:
>100_bases TCCTAGATTAAACCCTTTACGTCACACCGGAACCCCCTTGACGGGAGTTCCGATATTTTATTAATATCTTTTTAAGCGTT TGCCTAGAGATATTCCTCTG
Downstream 100 bases:
>100_bases AGCAAAATATTATAATTATATAATGCACGGTCAAAATCTTAGACAAAATGGCGCCCCTTCCGAGCTTGAAAACCATGGGT TAGATGCGAGCATTTACCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MKQNEIDFQHPSTRDQIRFYSLVAIAGILMVVAYQFGSSSYYLGWFAFFISAFSVAGNDAVQTIGTFIESKKVVHWISKL IVLGGTIVVIFLSTWIWNDFQIHFGRLENFPEVRKFNLIQLLAPLILVVITRLKSPISTTFLILGLFSGSNIEKMLTKSF FGYGIAFGIAIFVWGVLVKIDPKEYTEDHIPDPRSEKRWAIFQWLSTIYLWIAWLRQDAANIVIYLPRQLSILEFILAVG ILVVALGIILYTNGGTIQEIVTEKSDIQWSKAATIVDLVYGTILIVFHEWSQMPMSTTWVFLGMLAGREIILNFMTFRDL PYLETFRKVGKDVLLASMGIAVSIFIFILASQIYPDTASGS
Sequences:
>Translated_361_residues MKQNEIDFQHPSTRDQIRFYSLVAIAGILMVVAYQFGSSSYYLGWFAFFISAFSVAGNDAVQTIGTFIESKKVVHWISKL IVLGGTIVVIFLSTWIWNDFQIHFGRLENFPEVRKFNLIQLLAPLILVVITRLKSPISTTFLILGLFSGSNIEKMLTKSF FGYGIAFGIAIFVWGVLVKIDPKEYTEDHIPDPRSEKRWAIFQWLSTIYLWIAWLRQDAANIVIYLPRQLSILEFILAVG ILVVALGIILYTNGGTIQEIVTEKSDIQWSKAATIVDLVYGTILIVFHEWSQMPMSTTWVFLGMLAGREIILNFMTFRDL PYLETFRKVGKDVLLASMGIAVSIFIFILASQIYPDTASGS >Mature_361_residues MKQNEIDFQHPSTRDQIRFYSLVAIAGILMVVAYQFGSSSYYLGWFAFFISAFSVAGNDAVQTIGTFIESKKVVHWISKL IVLGGTIVVIFLSTWIWNDFQIHFGRLENFPEVRKFNLIQLLAPLILVVITRLKSPISTTFLILGLFSGSNIEKMLTKSF FGYGIAFGIAIFVWGVLVKIDPKEYTEDHIPDPRSEKRWAIFQWLSTIYLWIAWLRQDAANIVIYLPRQLSILEFILAVG ILVVALGIILYTNGGTIQEIVTEKSDIQWSKAATIVDLVYGTILIVFHEWSQMPMSTTWVFLGMLAGREIILNFMTFRDL PYLETFRKVGKDVLLASMGIAVSIFIFILASQIYPDTASGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40930; Mature: 40930
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQNEIDFQHPSTRDQIRFYSLVAIAGILMVVAYQFGSSSYYLGWFAFFISAFSVAGNDA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHH VQTIGTFIESKKVVHWISKLIVLGGTIVVIFLSTWIWNDFQIHFGRLENFPEVRKFNLIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHCCCHHHHHHHHHH LLAPLILVVITRLKSPISTTFLILGLFSGSNIEKMLTKSFFGYGIAFGIAIFVWGVLVKI HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEE DPKEYTEDHIPDPRSEKRWAIFQWLSTIYLWIAWLRQDAANIVIYLPRQLSILEFILAVG CCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHH ILVVALGIILYTNGGTIQEIVTEKSDIQWSKAATIVDLVYGTILIVFHEWSQMPMSTTWV HHHHHHHHHEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH FLGMLAGREIILNFMTFRDLPYLETFRKVGKDVLLASMGIAVSIFIFILASQIYPDTASG HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC S C >Mature Secondary Structure MKQNEIDFQHPSTRDQIRFYSLVAIAGILMVVAYQFGSSSYYLGWFAFFISAFSVAGNDA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHH VQTIGTFIESKKVVHWISKLIVLGGTIVVIFLSTWIWNDFQIHFGRLENFPEVRKFNLIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHCCCHHHHHHHHHH LLAPLILVVITRLKSPISTTFLILGLFSGSNIEKMLTKSFFGYGIAFGIAIFVWGVLVKI HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEE DPKEYTEDHIPDPRSEKRWAIFQWLSTIYLWIAWLRQDAANIVIYLPRQLSILEFILAVG CCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHH ILVVALGIILYTNGGTIQEIVTEKSDIQWSKAATIVDLVYGTILIVFHEWSQMPMSTTWV HHHHHHHHHEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH FLGMLAGREIILNFMTFRDLPYLETFRKVGKDVLLASMGIAVSIFIFILASQIYPDTASG HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA