| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327218
Identifier: 116327218
GI number: 116327218
Start: 475990
End: 477156
Strand: Direct
Name: 116327218
Synonym: LBL_0407
Alternate gene names: NA
Gene position: 475990-477156 (Clockwise)
Preceding gene: 116327217
Following gene: 116327219
Centisome position: 13.17
GC content: 36.59
Gene sequence:
>1167_bases ATGAATGGTACAAAACTGAAAAATCGGGATTTAGATGTCATAAATTCTCCGGAACAAAGAAAACATATTATTGAAAAACA TTTATTAAAACAGAGTTTGAATATAAGAGGAAACGACGGGGAAACGGCTACCATTCAAAAATACGTGGACGACGGAGAAA AAATCGTGGTAGAGCTATCGAATAAAAAGGAATTCCCGGAAAACGAGGAAATCGTTTTGTATCGAATTCTCGCCAAGTAC GTTCAATTAGAATGTAGCTTTTTGAGAAGGCTCAATTCAAAACTTGTGGAATTCAATGTAAACAAAATTTCGATCGCCAA ATCCAACCGCGCATTTCCACGTTATACTGTCCCCGACGATGCGGTACACGTCACGAACATCAATTCTTCCAAAACAGTCA TCGACGCGTCTTTGTTTAACATCCCTACTTTGGTTAAGGTCAGTTTTGAAGATTACAAAGTGAAATTAAAGCTGGACAAT CTCGGTTTGATTGAAATAGACGTTTTTAAATCCGATCAGAGCGATAAATTCGAATTGGTCAAACGAAGTAAAAAATATAT TCACATTGAAAACACTTCTCTGGAAGAATCCTATACATCCAAGAACGAAAACCAAATCAGTGTGGAAGACGATATTCACG AGGAAATCGCTTCTCTGATGAAAAAATATAAGGACGAGAAAATTATTTCGGAAATAATATATCCGGTCATTTATATCAAT CACTCTAGACAATCCATCCCTCTCGGTTATATTTGGGTCAGAAATAGAGAAAAAATTCTAGGTAAAGACACGGTCCAAAA ATTAGCCGAACTTTCCAAAGAAATGGTCGCTCGCATTAAAGAGTCCAACACTGTTTTAAGCACGGAAAAATTTCAGGTCA TAGACATTTCCAATAACGGTATCTGCATTAAAATTACGGATCCTCATTTAATCCAAACTCTTCCCAAACATACAGGATTC GTCTTCGACATTTACATTCGTATGCAAGGATATTTTAAAGTTTTCGGAGCGATTCGTTGGATTTCTTACGACGAAATTGG TAACCTAATTTTGGGCCTGGAATTGGTAGGTAAGTCCTCTTTTCCTGGAGAAAGAGAAAAGTTTTACAAAAACATCGAAC TTTTAAGTCAAGGACAAATTACCGGTTTGAAAACCAGCGCAATTTGA
Upstream 100 bases:
>100_bases TTGAGAATTCATATAATAAATTTTATATTTACCGAATTACAATTCATTCTATACAAGACGTCTATACTTTGTCTTGAGTA AGGATTTGATGATGAGTTCA
Downstream 100 bases:
>100_bases CTGTTTTTATTTAAATATAGTATGATTTTTGAATTCGTTCAGTACATGTAAAAATTCAAAGCCCGTCTCAAATCTCTGAA TTTTTTTGATACGAGTTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MNGTKLKNRDLDVINSPEQRKHIIEKHLLKQSLNIRGNDGETATIQKYVDDGEKIVVELSNKKEFPENEEIVLYRILAKY VQLECSFLRRLNSKLVEFNVNKISIAKSNRAFPRYTVPDDAVHVTNINSSKTVIDASLFNIPTLVKVSFEDYKVKLKLDN LGLIEIDVFKSDQSDKFELVKRSKKYIHIENTSLEESYTSKNENQISVEDDIHEEIASLMKKYKDEKIISEIIYPVIYIN HSRQSIPLGYIWVRNREKILGKDTVQKLAELSKEMVARIKESNTVLSTEKFQVIDISNNGICIKITDPHLIQTLPKHTGF VFDIYIRMQGYFKVFGAIRWISYDEIGNLILGLELVGKSSFPGEREKFYKNIELLSQGQITGLKTSAI
Sequences:
>Translated_388_residues MNGTKLKNRDLDVINSPEQRKHIIEKHLLKQSLNIRGNDGETATIQKYVDDGEKIVVELSNKKEFPENEEIVLYRILAKY VQLECSFLRRLNSKLVEFNVNKISIAKSNRAFPRYTVPDDAVHVTNINSSKTVIDASLFNIPTLVKVSFEDYKVKLKLDN LGLIEIDVFKSDQSDKFELVKRSKKYIHIENTSLEESYTSKNENQISVEDDIHEEIASLMKKYKDEKIISEIIYPVIYIN HSRQSIPLGYIWVRNREKILGKDTVQKLAELSKEMVARIKESNTVLSTEKFQVIDISNNGICIKITDPHLIQTLPKHTGF VFDIYIRMQGYFKVFGAIRWISYDEIGNLILGLELVGKSSFPGEREKFYKNIELLSQGQITGLKTSAI >Mature_388_residues MNGTKLKNRDLDVINSPEQRKHIIEKHLLKQSLNIRGNDGETATIQKYVDDGEKIVVELSNKKEFPENEEIVLYRILAKY VQLECSFLRRLNSKLVEFNVNKISIAKSNRAFPRYTVPDDAVHVTNINSSKTVIDASLFNIPTLVKVSFEDYKVKLKLDN LGLIEIDVFKSDQSDKFELVKRSKKYIHIENTSLEESYTSKNENQISVEDDIHEEIASLMKKYKDEKIISEIIYPVIYIN HSRQSIPLGYIWVRNREKILGKDTVQKLAELSKEMVARIKESNTVLSTEKFQVIDISNNGICIKITDPHLIQTLPKHTGF VFDIYIRMQGYFKVFGAIRWISYDEIGNLILGLELVGKSSFPGEREKFYKNIELLSQGQITGLKTSAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44695; Mature: 44695
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGTKLKNRDLDVINSPEQRKHIIEKHLLKQSLNIRGNDGETATIQKYVDDGEKIVVELS CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHCCCCEEEEEEC NKKEFPENEEIVLYRILAKYVQLECSFLRRLNSKLVEFNVNKISIAKSNRAFPRYTVPDD CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEECCCCCCCCCCCCC AVHVTNINSSKTVIDASLFNIPTLVKVSFEDYKVKLKLDNLGLIEIDVFKSDQSDKFELV CEEEEECCCCCEEEEEHHHCCCEEEEEEEECEEEEEEECCCCEEEEEEECCCCCCHHHHH KRSKKYIHIENTSLEESYTSKNENQISVEDDIHEEIASLMKKYKDEKIISEIIYPVIYIN HCCCCEEEEECCCCCHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEE HSRQSIPLGYIWVRNREKILGKDTVQKLAELSKEMVARIKESNTVLSTEKFQVIDISNNG CCCCCCCEEEEEECCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEECCCC ICIKITDPHLIQTLPKHTGFVFDIYIRMQGYFKVFGAIRWISYDEIGNLILGLELVGKSS EEEEECCCHHHHHHHHHCCEEEEEEEEECHHHHHHHHHHEEEHHHHCCEEEEEEEECCCC FPGEREKFYKNIELLSQGQITGLKTSAI CCCHHHHHHHHHHHHCCCCCCCEEECCC >Mature Secondary Structure MNGTKLKNRDLDVINSPEQRKHIIEKHLLKQSLNIRGNDGETATIQKYVDDGEKIVVELS CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHCCCCEEEEEEC NKKEFPENEEIVLYRILAKYVQLECSFLRRLNSKLVEFNVNKISIAKSNRAFPRYTVPDD CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEECCCCCCCCCCCCC AVHVTNINSSKTVIDASLFNIPTLVKVSFEDYKVKLKLDNLGLIEIDVFKSDQSDKFELV CEEEEECCCCCEEEEEHHHCCCEEEEEEEECEEEEEEECCCCEEEEEEECCCCCCHHHHH KRSKKYIHIENTSLEESYTSKNENQISVEDDIHEEIASLMKKYKDEKIISEIIYPVIYIN HCCCCEEEEECCCCCHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEE HSRQSIPLGYIWVRNREKILGKDTVQKLAELSKEMVARIKESNTVLSTEKFQVIDISNNG CCCCCCCEEEEEECCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEECCCC ICIKITDPHLIQTLPKHTGFVFDIYIRMQGYFKVFGAIRWISYDEIGNLILGLELVGKSS EEEEECCCHHHHHHHHHCCEEEEEEEEECHHHHHHHHHHEEEHHHHCCEEEEEEEECCCC FPGEREKFYKNIELLSQGQITGLKTSAI CCCHHHHHHHHHHHHCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA