| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is gpsA [H]
Identifier: 116327202
GI number: 116327202
Start: 453634
End: 455550
Strand: Direct
Name: gpsA [H]
Synonym: LBL_0389
Alternate gene names: 116327202
Gene position: 453634-455550 (Clockwise)
Preceding gene: 116327199
Following gene: 116327205
Centisome position: 12.55
GC content: 42.15
Gene sequence:
>1917_bases ATGGCTGAAAAAGAATCCAGCGTAGGCAAATGGCAAAAGGAATTTTTTGAAAACATTCATTTGTTCCAACGTTCCGGAAT GACGGAAGAAGAAGCCAAAAAGATTCTTCAAAAATTTTTACATCTCTCTTCGATAACTCCGATGCCTCCGGTTATGGAAG TATTCAAAGAACCGAATCTTTTGGAAACCGTGGGAGTTTATACCTCTCCCGAACAACGTTCCCGAGAATTCATGATGGAA TTTCTTTCTCCGATCATGAAACAGTTCACCGTGGAAGGTGTGGACAACCTTAAAGCGATTAAACCTTTAATCGGTAAGTA TCCGATCACTCTTATTTCCAATCATTTGTCTCATTTGGATGCGCCTGCAATTTTTCATCAACTTTACAATTGTTCGCCCG AAGGAAAATCGATCGCGGAACAACTCGTTTTTATAGCGGGAAGATTGGACTACGAACCTGATTTTACGAGACTCGGTTTG TATATGTTTGGGACTCTTTTAGTCTGCTCCAAAAGGGATATGGCGGATAATCCGAGTTTGTCCGACGTGATGACAAAGAT CAATATGAGAGCCTTTCGTCATTCCCAAAAACTTCAGTCGGAAGGTAAAATCGTCGCCATTTTCCCGGAAGGGACCCGTT CCAGGGACGGAAGACTAACGCCTTTCGTGGAAACCGTTTATCATTATGTTGCCAATAAGGTTATTATCCCCATTTCTCTC GAAAAGACCGATAAGATTCTCCCGACGACAAGTCTTCTTTTCAATCAGGTGAACGGAAAGCTTGTGATCGGTAAACCTGT GTTAGTCGGGGAGCTTTCCCGTAAACAAATGGAATCTTTTCCTAAGGAAGTGGAACAACTTCAGTTTCCGGAACACGGAG ATAAAAAGCAATTCTTGATCGACAATCTTGCTCTTCTTGTGGGCTCTAATTTGAATAAGCACCAACACGGAACTTATAGA AATCTCTACAAGGGAAACGTTTCCGGTAAAAATATTCTCATCAAAGTTCCAAACGAGCCGGAAGAAAAAATCGTCGTGAT CGGCGCAAGTAGTATGTCGATCGCCGTCGCCACTCTTCTTGCAAACAAGGATATTCTGGTTTATCTCTATCATCCAGATC AGGCATACACGGAACAATGTAATACGGAAAGAAGAGAACTGAAATACTACCCTCTTTATAAATTTCCTCCGAATTTGGTT TTTACTTCCGATCCGGATGTTTTAAAGACCGCTACCTTATTCATTCAAGGAACTAATCCTTGGGAACTCATCAACGTTTA TCCGGAAATTCAACCTTATTTAAATAGAAACAAGGCGCCTTTCTTTAACGTGATCAAAGGTTTTACAAGTACTGGTTTGA TTCTCGACGAAGTACAAAACGCATTCGGTTTGGAAGACGATCGCCTCGGTGTAATTGCGGGAGCTTGTTATCCGGATCAA ATCATGGAAAGAAAAATCTCCGGTTTCGAGATAGCCGCGTCGAATGAGACACTCATTTCAAGAGTTCAAAAACTTTTTAC CAACGGTTATATCTTTCCAAGACCGGCGAGAATCCCAACCGACGTCAAAGGTGTCCAATTGGGAGGCGCTCTGAAGACGA TCTATGCGCTTGCAATGGGAATTGTGGAGGGGTATTTCACACAGACTTTCGGCGGTAATGTGGATAATTCTCTCTTTCAT TTATCCAATCGTTTTTTTGCGGAGATGACTGCGATCGGCACCAAGATGGGCGGACAATCAGAGACTTTTTTAGGTCTTTC CGGTTTAACCGACTTTATGCTTTCTTGTTTCGGAATGGATGCAAAAGATAGAAAGACGGGATACGATATCGCTTACGGTT CTCCATCGGAAAGAATGTCGAACGGATTCTATGGCCTTCTATATTCGTTTTTTCATCGAAGATTGTTTGCCTGCTGA
Upstream 100 bases:
>100_bases TAAATTCCGAATCTGTTTATAGAATCTATCGGAATACGAATAGTTCGGATTCTAGACGGTTATAAAGAATTTATTTTGGA CGGACCAGGAAGGTAATACG
Downstream 100 bases:
>100_bases TTTTAAAATTTACGAAAGGTGTAAGTCGTTAGGCGATTCCGAATCGAATTTACATTAAGAACTTGTCCCAAAACTTGAAA AGAAATCAGCATAATCATTT
Product: bifunctional glycerol-3-phosphate dehydrogenase /glycerol-3-phosphate acyltransferase
Products: NA
Alternate protein names: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [H]
Number of amino acids: Translated: 638; Mature: 637
Protein sequence:
>638_residues MAEKESSVGKWQKEFFENIHLFQRSGMTEEEAKKILQKFLHLSSITPMPPVMEVFKEPNLLETVGVYTSPEQRSREFMME FLSPIMKQFTVEGVDNLKAIKPLIGKYPITLISNHLSHLDAPAIFHQLYNCSPEGKSIAEQLVFIAGRLDYEPDFTRLGL YMFGTLLVCSKRDMADNPSLSDVMTKINMRAFRHSQKLQSEGKIVAIFPEGTRSRDGRLTPFVETVYHYVANKVIIPISL EKTDKILPTTSLLFNQVNGKLVIGKPVLVGELSRKQMESFPKEVEQLQFPEHGDKKQFLIDNLALLVGSNLNKHQHGTYR NLYKGNVSGKNILIKVPNEPEEKIVVIGASSMSIAVATLLANKDILVYLYHPDQAYTEQCNTERRELKYYPLYKFPPNLV FTSDPDVLKTATLFIQGTNPWELINVYPEIQPYLNRNKAPFFNVIKGFTSTGLILDEVQNAFGLEDDRLGVIAGACYPDQ IMERKISGFEIAASNETLISRVQKLFTNGYIFPRPARIPTDVKGVQLGGALKTIYALAMGIVEGYFTQTFGGNVDNSLFH LSNRFFAEMTAIGTKMGGQSETFLGLSGLTDFMLSCFGMDAKDRKTGYDIAYGSPSERMSNGFYGLLYSFFHRRLFAC
Sequences:
>Translated_638_residues MAEKESSVGKWQKEFFENIHLFQRSGMTEEEAKKILQKFLHLSSITPMPPVMEVFKEPNLLETVGVYTSPEQRSREFMME FLSPIMKQFTVEGVDNLKAIKPLIGKYPITLISNHLSHLDAPAIFHQLYNCSPEGKSIAEQLVFIAGRLDYEPDFTRLGL YMFGTLLVCSKRDMADNPSLSDVMTKINMRAFRHSQKLQSEGKIVAIFPEGTRSRDGRLTPFVETVYHYVANKVIIPISL EKTDKILPTTSLLFNQVNGKLVIGKPVLVGELSRKQMESFPKEVEQLQFPEHGDKKQFLIDNLALLVGSNLNKHQHGTYR NLYKGNVSGKNILIKVPNEPEEKIVVIGASSMSIAVATLLANKDILVYLYHPDQAYTEQCNTERRELKYYPLYKFPPNLV FTSDPDVLKTATLFIQGTNPWELINVYPEIQPYLNRNKAPFFNVIKGFTSTGLILDEVQNAFGLEDDRLGVIAGACYPDQ IMERKISGFEIAASNETLISRVQKLFTNGYIFPRPARIPTDVKGVQLGGALKTIYALAMGIVEGYFTQTFGGNVDNSLFH LSNRFFAEMTAIGTKMGGQSETFLGLSGLTDFMLSCFGMDAKDRKTGYDIAYGSPSERMSNGFYGLLYSFFHRRLFAC >Mature_637_residues AEKESSVGKWQKEFFENIHLFQRSGMTEEEAKKILQKFLHLSSITPMPPVMEVFKEPNLLETVGVYTSPEQRSREFMMEF LSPIMKQFTVEGVDNLKAIKPLIGKYPITLISNHLSHLDAPAIFHQLYNCSPEGKSIAEQLVFIAGRLDYEPDFTRLGLY MFGTLLVCSKRDMADNPSLSDVMTKINMRAFRHSQKLQSEGKIVAIFPEGTRSRDGRLTPFVETVYHYVANKVIIPISLE KTDKILPTTSLLFNQVNGKLVIGKPVLVGELSRKQMESFPKEVEQLQFPEHGDKKQFLIDNLALLVGSNLNKHQHGTYRN LYKGNVSGKNILIKVPNEPEEKIVVIGASSMSIAVATLLANKDILVYLYHPDQAYTEQCNTERRELKYYPLYKFPPNLVF TSDPDVLKTATLFIQGTNPWELINVYPEIQPYLNRNKAPFFNVIKGFTSTGLILDEVQNAFGLEDDRLGVIAGACYPDQI MERKISGFEIAASNETLISRVQKLFTNGYIFPRPARIPTDVKGVQLGGALKTIYALAMGIVEGYFTQTFGGNVDNSLFHL SNRFFAEMTAIGTKMGGQSETFLGLSGLTDFMLSCFGMDAKDRKTGYDIAYGSPSERMSNGFYGLLYSFFHRRLFAC
Specific function: De novo phospholipid biosynthesis; glycerol-3 phosphate formation. [C]
COG id: COG0240
COG function: function code C; Glycerol-3-phosphate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1790037, Length=278, Percent_Identity=28.7769784172662, Blast_Score=97, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013328 - InterPro: IPR006168 - InterPro: IPR006109 - InterPro: IPR011128 - InterPro: IPR016040 [H]
Pfam domain/function: PF07479 NAD_Gly3P_dh_C; PF01210 NAD_Gly3P_dh_N [H]
EC number: =1.1.1.94 [H]
Molecular weight: Translated: 71954; Mature: 71823
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEKESSVGKWQKEFFENIHLFQRSGMTEEEAKKILQKFLHLSSITPMPPVMEVFKEPNL CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCH LETVGVYTSPEQRSREFMMEFLSPIMKQFTVEGVDNLKAIKPLIGKYPITLISNHLSHLD HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHCC APAIFHQLYNCSPEGKSIAEQLVFIAGRLDYEPDFTRLGLYMFGTLLVCSKRDMADNPSL HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCH SDVMTKINMRAFRHSQKLQSEGKIVAIFPEGTRSRDGRLTPFVETVYHYVANKVIIPISL HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEE EKTDKILPTTSLLFNQVNGKLVIGKPVLVGELSRKQMESFPKEVEQLQFPEHGDKKQFLI CCCCCCCCHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH DNLALLVGSNLNKHQHGTYRNLYKGNVSGKNILIKVPNEPEEKIVVIGASSMSIAVATLL HHHHHHHCCCCCCCCCCCHHHHEECCCCCCEEEEECCCCCCCCEEEEECCCHHHHHHHHH ANKDILVYLYHPDQAYTEQCNTERRELKYYPLYKFPPNLVFTSDPDVLKTATLFIQGTNP CCCCEEEEEECCCHHHHHHHCCHHHHEEECCEEECCCCCEECCCCCCEEEEEEEEECCCC WELINVYPEIQPYLNRNKAPFFNVIKGFTSTGLILDEVQNAFGLEDDRLGVIAGACYPDQ CEEEEECCCHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEECCCHHH IMERKISGFEIAASNETLISRVQKLFTNGYIFPRPARIPTDVKGVQLGGALKTIYALAMG HHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHH IVEGYFTQTFGGNVDNSLFHLSNRFFAEMTAIGTKMGGQSETFLGLSGLTDFMLSCFGMD HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHCCC AKDRKTGYDIAYGSPSERMSNGFYGLLYSFFHRRLFAC CCCCCCCCEEECCCCHHHHHCCHHHHHHHHHHHHHHCC >Mature Secondary Structure AEKESSVGKWQKEFFENIHLFQRSGMTEEEAKKILQKFLHLSSITPMPPVMEVFKEPNL CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCH LETVGVYTSPEQRSREFMMEFLSPIMKQFTVEGVDNLKAIKPLIGKYPITLISNHLSHLD HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHCC APAIFHQLYNCSPEGKSIAEQLVFIAGRLDYEPDFTRLGLYMFGTLLVCSKRDMADNPSL HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCH SDVMTKINMRAFRHSQKLQSEGKIVAIFPEGTRSRDGRLTPFVETVYHYVANKVIIPISL HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEE EKTDKILPTTSLLFNQVNGKLVIGKPVLVGELSRKQMESFPKEVEQLQFPEHGDKKQFLI CCCCCCCCHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH DNLALLVGSNLNKHQHGTYRNLYKGNVSGKNILIKVPNEPEEKIVVIGASSMSIAVATLL HHHHHHHCCCCCCCCCCCHHHHEECCCCCCEEEEECCCCCCCCEEEEECCCHHHHHHHHH ANKDILVYLYHPDQAYTEQCNTERRELKYYPLYKFPPNLVFTSDPDVLKTATLFIQGTNP CCCCEEEEEECCCHHHHHHHCCHHHHEEECCEEECCCCCEECCCCCCEEEEEEEEECCCC WELINVYPEIQPYLNRNKAPFFNVIKGFTSTGLILDEVQNAFGLEDDRLGVIAGACYPDQ CEEEEECCCHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEECCCHHH IMERKISGFEIAASNETLISRVQKLFTNGYIFPRPARIPTDVKGVQLGGALKTIYALAMG HHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHH IVEGYFTQTFGGNVDNSLFHLSNRFFAEMTAIGTKMGGQSETFLGLSGLTDFMLSCFGMD HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHCCC AKDRKTGYDIAYGSPSERMSNGFYGLLYSFFHRRLFAC CCCCCCCCEEECCCCHHHHHCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA